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The map label for this gene is int [H]

Identifier: 21241118

GI number: 21241118

Start: 410422

End: 410838

Strand: Direct

Name: int [H]

Synonym: XAC0344

Alternate gene names: 21241118

Gene position: 410422-410838 (Clockwise)

Preceding gene: 21241114

Following gene: 21241120

Centisome position: 7.93

GC content: 63.07

Gene sequence:

>417_bases
ATGACGCCTCCGACTCCGAAGCTGCTGGATCAGGTCCGTGGTCGGCTGCGGCTTCGCCATTACAGTCTGCGGACTGAGCA
GGCGTATGTAAGCTGGATCCGACGCTTCATTCTGGCAAGTGGCCAACGGCATCCAGGACAGATGGGACAAGTAGAGGGCG
AGGCGTTTCTCACCAAATTGGCGGCGCGGGGCCAGGTGTCGGCCGGCACGCAGGAGGTCGCGCGCTTGCTGTCGATGCTG
GAGGGGAATTGTCGGCTGGTGGCAGGGCTGCTGTATGGCAGCGGGATGCGGTTGCTGGAATGCCTGCGCTTGCGGAGCAA
GGCGATGGACATAGTTCGCGGCGAAATTGCAGTGCGCGATGGCTGGGACGCGAGCATCTGCGGTATGTGGTCCGCTGGAC
GGGCTCAGCCGTCTTGA

Upstream 100 bases:

>100_bases
ATGACTTGTGGATGGCAACCGATGGTGTTGGCGTCGATGCTGCTTGCGTTATCCAGCGTTTGAGCAAGCACATGCGTACA
CCCGTGACGATGCAGGCGTA

Downstream 100 bases:

>100_bases
TAGTGACGCGGAACATGCGGGGCGAGCGATGCAGTGATAGAACGCTTGCCACCACGTTATCGATATCGACATCGCGTGCT
CTGAATAACCAGAGCACGCG

Product: phage-related integrase

Products: NA

Alternate protein names: E2 protein [H]

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MTPPTPKLLDQVRGRLRLRHYSLRTEQAYVSWIRRFILASGQRHPGQMGQVEGEAFLTKLAARGQVSAGTQEVARLLSML
EGNCRLVAGLLYGSGMRLLECLRLRSKAMDIVRGEIAVRDGWDASICGMWSAGRAQPS

Sequences:

>Translated_138_residues
MTPPTPKLLDQVRGRLRLRHYSLRTEQAYVSWIRRFILASGQRHPGQMGQVEGEAFLTKLAARGQVSAGTQEVARLLSML
EGNCRLVAGLLYGSGMRLLECLRLRSKAMDIVRGEIAVRDGWDASICGMWSAGRAQPS
>Mature_137_residues
TPPTPKLLDQVRGRLRLRHYSLRTEQAYVSWIRRFILASGQRHPGQMGQVEGEAFLTKLAARGQVSAGTQEVARLLSMLE
GNCRLVAGLLYGSGMRLLECLRLRSKAMDIVRGEIAVRDGWDASICGMWSAGRAQPS

Specific function: Putative integrase believed to be involved in the insertion of antibiotic resistance genes into plasmids and transposons [H]

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR011946
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 15312; Mature: 15181

Theoretical pI: Translated: 11.00; Mature: 11.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPPTPKLLDQVRGRLRLRHYSLRTEQAYVSWIRRFILASGQRHPGQMGQVEGEAFLTKL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
AARGQVSAGTQEVARLLSMLEGNCRLVAGLLYGSGMRLLECLRLRSKAMDIVRGEIAVRD
HHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEECC
GWDASICGMWSAGRAQPS
CCCCHHHCCCCCCCCCCC
>Mature Secondary Structure 
TPPTPKLLDQVRGRLRLRHYSLRTEQAYVSWIRRFILASGQRHPGQMGQVEGEAFLTKL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
AARGQVSAGTQEVARLLSMLEGNCRLVAGLLYGSGMRLLECLRLRSKAMDIVRGEIAVRD
HHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEECC
GWDASICGMWSAGRAQPS
CCCCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2821509; 2823258; 3054482; 8195081; 2188588 [H]