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The map label for this gene is yibN [H]

Identifier: 21240994

GI number: 21240994

Start: 267684

End: 268118

Strand: Direct

Name: yibN [H]

Synonym: XAC0220

Alternate gene names: 21240994

Gene position: 267684-268118 (Clockwise)

Preceding gene: 21240993

Following gene: 21240995

Centisome position: 5.17

GC content: 65.75

Gene sequence:

>435_bases
GTGAATTTCGAAGAGCTGCAGGCCTTTGTCGGCCGCAACCCCATGTTGTCGCTGGCCCTGGTGGGCCTGACCATCGCCCT
GATCGTCACCGAGGTCGCGCGCCTGTTCCGCGGCTATCGCGCGCTCAAGCCGGCCGAGCTGACCCGTCTGATCAACAGCG
AAAACGCGCTGGTGATCGACCTGTCGCCCACTGCCGACTTCGAAAAAGGCCACATCGCCGGCAGCCGGAACGTGGCGCTG
GCCAAGTTCGACCCAGCCGGCAAGCTATTGGCCAACGCCAAGGCCTCGCCGGTGGTGGTGGTCTGCCGCAGTGGCACCAC
CTCCGCCGGTGCAGCCAAGACGCTGAAGAAAGCCGGCTTCGAACAGGTGTACTGGCTCGAAGGCGGCGTGGCCGCCTGGC
AGATGGCCGAGCTGCCACTGATCAAGGGCCGCTGA

Upstream 100 bases:

>100_bases
TGCCCGACCTGTGGAAGGGCCAGTAGCCTGCCCTTGCGCGCCGGGCGTCGCGTGCGCCAGCTGTGCGACAATTCCCGCCC
GCTCGACTGACCCTGACCCC

Downstream 100 bases:

>100_bases
TCGGCCTTGTGCGGCACCCGGCACGCCCCCATTGCTGGCGTGAGAGACTCGCGCTTTCACGTTCGCATCACTCAACGCTG
CATCCACCGAACCGTTTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MNFEELQAFVGRNPMLSLALVGLTIALIVTEVARLFRGYRALKPAELTRLINSENALVIDLSPTADFEKGHIAGSRNVAL
AKFDPAGKLLANAKASPVVVVCRSGTTSAGAAKTLKKAGFEQVYWLEGGVAAWQMAELPLIKGR

Sequences:

>Translated_144_residues
MNFEELQAFVGRNPMLSLALVGLTIALIVTEVARLFRGYRALKPAELTRLINSENALVIDLSPTADFEKGHIAGSRNVAL
AKFDPAGKLLANAKASPVVVVCRSGTTSAGAAKTLKKAGFEQVYWLEGGVAAWQMAELPLIKGR
>Mature_144_residues
MNFEELQAFVGRNPMLSLALVGLTIALIVTEVARLFRGYRALKPAELTRLINSENALVIDLSPTADFEKGHIAGSRNVAL
AKFDPAGKLLANAKASPVVVVCRSGTTSAGAAKTLKKAGFEQVYWLEGGVAAWQMAELPLIKGR

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

Organism=Escherichia coli, GI1790040, Length=144, Percent_Identity=43.0555555555556, Blast_Score=109, Evalue=6e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 15380; Mature: 15380

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFEELQAFVGRNPMLSLALVGLTIALIVTEVARLFRGYRALKPAELTRLINSENALVID
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEE
LSPTADFEKGHIAGSRNVALAKFDPAGKLLANAKASPVVVVCRSGTTSAGAAKTLKKAGF
ECCCCCCCCCCCCCCCCEEEEEECCCHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHCCC
EQVYWLEGGVAAWQMAELPLIKGR
CEEEEECCCCHHHHHHCCCCCCCC
>Mature Secondary Structure
MNFEELQAFVGRNPMLSLALVGLTIALIVTEVARLFRGYRALKPAELTRLINSENALVID
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEE
LSPTADFEKGHIAGSRNVALAKFDPAGKLLANAKASPVVVVCRSGTTSAGAAKTLKKAGF
ECCCCCCCCCCCCCCCCEEEEEECCCHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHCCC
EQVYWLEGGVAAWQMAELPLIKGR
CEEEEECCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]