Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21240976
Identifier: 21240976
GI number: 21240976
Start: 248766
End: 249581
Strand: Reverse
Name: 21240976
Synonym: XAC0202
Alternate gene names: NA
Gene position: 249581-248766 (Counterclockwise)
Preceding gene: 21240977
Following gene: 77748518
Centisome position: 4.82
GC content: 69.73
Gene sequence:
>816_bases ATGCGTGCCGTGTTCTTGGCCCCAGCATTGCTGGCGGCAGGCGTGACGGCCTGCGGGTCGGGTGCATCGCCGGACCCGCC CGGCTTCAGCCACGCTGCTGCGCGGGCGCCGGTCGCCGTCCCCCCTGACACGGACAATGTCCCGTTGCGCGCCGCCTTGC GCGCGCAGCACTGGCACCTGCAGCGGGCCAGCGATGCGCATGGCACGGCCTTGCGCAGCCTGTTCGTCGACGGCGTGCCG CCAGTGCAACTGGATTTCAGCGATCAGCGCATCCAGGTCAGCCAGACCTGCAACGCGCTGGGCGCCAACTACAGCGTGGC CGAGGCGCACGTGCAGATTGGCCGGGTGGTCTCGAGCAAGCGAATGTGCGCCGATGCACGCCGGATGGCGCAGGAGCGCG CGGCCAGCGACCTGTTGTCCGGGCGCTTCGCAGTGATCATGGACAACGCAGCAGCTGCGCCCCGCCTGACCCTGACCCGC AGCGACGGCACTGTGCTGATCTTCGGCGGCACGCCCACTGCGGACACCCGGTATGGCGGGCCGGGGCAGACGCTGTTGAT CGAAGTAGCCGCAGAGACCGTGCCCTGCGTTTCCGACCCTGCGCGCCGCTGCCTGCAAGTGCGCGAGCACGCCCCGGACG CACCTGCCACCGTACAGGCCGCAACATCATGGCAGCCCTACGACGGCGCGATCGAGGGTTTCGTCCATGAAGACGGCATA CGCACCCTGCTGCGCGTGACCCGCTACCCGGCCGGCAGCGAGCCTGGCGCCAAACCGGTGTACGTGCTCGACCAGATGAT CGAGGCCGGCAGCTAG
Upstream 100 bases:
>100_bases GCTTGATTGGCGGCTTTGGGGCGTCCACGTCGTGACGCCGGTCATTGCCCCGGGCGCACGCTGGCGGTATCACTGGCGCA TCGATCACCGGGAGCTGCGC
Downstream 100 bases:
>100_bases CGCGGCCGCAGCATTGGGCCGGCAACGGCCTCGCACGCGCCGCCGCCGCCCCGCATCACAACCGGATGAGGACCTTGCCC ACGTGTTGCGCCCTGGCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MRAVFLAPALLAAGVTACGSGASPDPPGFSHAAARAPVAVPPDTDNVPLRAALRAQHWHLQRASDAHGTALRSLFVDGVP PVQLDFSDQRIQVSQTCNALGANYSVAEAHVQIGRVVSSKRMCADARRMAQERAASDLLSGRFAVIMDNAAAAPRLTLTR SDGTVLIFGGTPTADTRYGGPGQTLLIEVAAETVPCVSDPARRCLQVREHAPDAPATVQAATSWQPYDGAIEGFVHEDGI RTLLRVTRYPAGSEPGAKPVYVLDQMIEAGS
Sequences:
>Translated_271_residues MRAVFLAPALLAAGVTACGSGASPDPPGFSHAAARAPVAVPPDTDNVPLRAALRAQHWHLQRASDAHGTALRSLFVDGVP PVQLDFSDQRIQVSQTCNALGANYSVAEAHVQIGRVVSSKRMCADARRMAQERAASDLLSGRFAVIMDNAAAAPRLTLTR SDGTVLIFGGTPTADTRYGGPGQTLLIEVAAETVPCVSDPARRCLQVREHAPDAPATVQAATSWQPYDGAIEGFVHEDGI RTLLRVTRYPAGSEPGAKPVYVLDQMIEAGS >Mature_271_residues MRAVFLAPALLAAGVTACGSGASPDPPGFSHAAARAPVAVPPDTDNVPLRAALRAQHWHLQRASDAHGTALRSLFVDGVP PVQLDFSDQRIQVSQTCNALGANYSVAEAHVQIGRVVSSKRMCADARRMAQERAASDLLSGRFAVIMDNAAAAPRLTLTR SDGTVLIFGGTPTADTRYGGPGQTLLIEVAAETVPCVSDPARRCLQVREHAPDAPATVQAATSWQPYDGAIEGFVHEDGI RTLLRVTRYPAGSEPGAKPVYVLDQMIEAGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28496; Mature: 28496
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAVFLAPALLAAGVTACGSGASPDPPGFSHAAARAPVAVPPDTDNVPLRAALRAQHWHL CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCEECCCCCCCCCHHHHHHHHHHHH QRASDAHGTALRSLFVDGVPPVQLDFSDQRIQVSQTCNALGANYSVAEAHVQIGRVVSSK CCCCCCHHHHHHHHHHCCCCCEEECCCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHH RMCADARRMAQERAASDLLSGRFAVIMDNAAAAPRLTLTRSDGTVLIFGGTPTADTRYGG HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCEEEEECCCCCCCCCCCC PGQTLLIEVAAETVPCVSDPARRCLQVREHAPDAPATVQAATSWQPYDGAIEGFVHEDGI CCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHEHHHHH RTLLRVTRYPAGSEPGAKPVYVLDQMIEAGS HHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MRAVFLAPALLAAGVTACGSGASPDPPGFSHAAARAPVAVPPDTDNVPLRAALRAQHWHL CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCEECCCCCCCCCHHHHHHHHHHHH QRASDAHGTALRSLFVDGVPPVQLDFSDQRIQVSQTCNALGANYSVAEAHVQIGRVVSSK CCCCCCHHHHHHHHHHCCCCCEEECCCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHH RMCADARRMAQERAASDLLSGRFAVIMDNAAAAPRLTLTRSDGTVLIFGGTPTADTRYGG HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCEEEEECCCCCCCCCCCC PGQTLLIEVAAETVPCVSDPARRCLQVREHAPDAPATVQAATSWQPYDGAIEGFVHEDGI CCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHEHHHHH RTLLRVTRYPAGSEPGAKPVYVLDQMIEAGS HHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA