Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

Click here to switch to the map view.

The map label for this gene is 21240976

Identifier: 21240976

GI number: 21240976

Start: 248766

End: 249581

Strand: Reverse

Name: 21240976

Synonym: XAC0202

Alternate gene names: NA

Gene position: 249581-248766 (Counterclockwise)

Preceding gene: 21240977

Following gene: 77748518

Centisome position: 4.82

GC content: 69.73

Gene sequence:

>816_bases
ATGCGTGCCGTGTTCTTGGCCCCAGCATTGCTGGCGGCAGGCGTGACGGCCTGCGGGTCGGGTGCATCGCCGGACCCGCC
CGGCTTCAGCCACGCTGCTGCGCGGGCGCCGGTCGCCGTCCCCCCTGACACGGACAATGTCCCGTTGCGCGCCGCCTTGC
GCGCGCAGCACTGGCACCTGCAGCGGGCCAGCGATGCGCATGGCACGGCCTTGCGCAGCCTGTTCGTCGACGGCGTGCCG
CCAGTGCAACTGGATTTCAGCGATCAGCGCATCCAGGTCAGCCAGACCTGCAACGCGCTGGGCGCCAACTACAGCGTGGC
CGAGGCGCACGTGCAGATTGGCCGGGTGGTCTCGAGCAAGCGAATGTGCGCCGATGCACGCCGGATGGCGCAGGAGCGCG
CGGCCAGCGACCTGTTGTCCGGGCGCTTCGCAGTGATCATGGACAACGCAGCAGCTGCGCCCCGCCTGACCCTGACCCGC
AGCGACGGCACTGTGCTGATCTTCGGCGGCACGCCCACTGCGGACACCCGGTATGGCGGGCCGGGGCAGACGCTGTTGAT
CGAAGTAGCCGCAGAGACCGTGCCCTGCGTTTCCGACCCTGCGCGCCGCTGCCTGCAAGTGCGCGAGCACGCCCCGGACG
CACCTGCCACCGTACAGGCCGCAACATCATGGCAGCCCTACGACGGCGCGATCGAGGGTTTCGTCCATGAAGACGGCATA
CGCACCCTGCTGCGCGTGACCCGCTACCCGGCCGGCAGCGAGCCTGGCGCCAAACCGGTGTACGTGCTCGACCAGATGAT
CGAGGCCGGCAGCTAG

Upstream 100 bases:

>100_bases
GCTTGATTGGCGGCTTTGGGGCGTCCACGTCGTGACGCCGGTCATTGCCCCGGGCGCACGCTGGCGGTATCACTGGCGCA
TCGATCACCGGGAGCTGCGC

Downstream 100 bases:

>100_bases
CGCGGCCGCAGCATTGGGCCGGCAACGGCCTCGCACGCGCCGCCGCCGCCCCGCATCACAACCGGATGAGGACCTTGCCC
ACGTGTTGCGCCCTGGCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MRAVFLAPALLAAGVTACGSGASPDPPGFSHAAARAPVAVPPDTDNVPLRAALRAQHWHLQRASDAHGTALRSLFVDGVP
PVQLDFSDQRIQVSQTCNALGANYSVAEAHVQIGRVVSSKRMCADARRMAQERAASDLLSGRFAVIMDNAAAAPRLTLTR
SDGTVLIFGGTPTADTRYGGPGQTLLIEVAAETVPCVSDPARRCLQVREHAPDAPATVQAATSWQPYDGAIEGFVHEDGI
RTLLRVTRYPAGSEPGAKPVYVLDQMIEAGS

Sequences:

>Translated_271_residues
MRAVFLAPALLAAGVTACGSGASPDPPGFSHAAARAPVAVPPDTDNVPLRAALRAQHWHLQRASDAHGTALRSLFVDGVP
PVQLDFSDQRIQVSQTCNALGANYSVAEAHVQIGRVVSSKRMCADARRMAQERAASDLLSGRFAVIMDNAAAAPRLTLTR
SDGTVLIFGGTPTADTRYGGPGQTLLIEVAAETVPCVSDPARRCLQVREHAPDAPATVQAATSWQPYDGAIEGFVHEDGI
RTLLRVTRYPAGSEPGAKPVYVLDQMIEAGS
>Mature_271_residues
MRAVFLAPALLAAGVTACGSGASPDPPGFSHAAARAPVAVPPDTDNVPLRAALRAQHWHLQRASDAHGTALRSLFVDGVP
PVQLDFSDQRIQVSQTCNALGANYSVAEAHVQIGRVVSSKRMCADARRMAQERAASDLLSGRFAVIMDNAAAAPRLTLTR
SDGTVLIFGGTPTADTRYGGPGQTLLIEVAAETVPCVSDPARRCLQVREHAPDAPATVQAATSWQPYDGAIEGFVHEDGI
RTLLRVTRYPAGSEPGAKPVYVLDQMIEAGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28496; Mature: 28496

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAVFLAPALLAAGVTACGSGASPDPPGFSHAAARAPVAVPPDTDNVPLRAALRAQHWHL
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCEECCCCCCCCCHHHHHHHHHHHH
QRASDAHGTALRSLFVDGVPPVQLDFSDQRIQVSQTCNALGANYSVAEAHVQIGRVVSSK
CCCCCCHHHHHHHHHHCCCCCEEECCCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHH
RMCADARRMAQERAASDLLSGRFAVIMDNAAAAPRLTLTRSDGTVLIFGGTPTADTRYGG
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCEEEEECCCCCCCCCCCC
PGQTLLIEVAAETVPCVSDPARRCLQVREHAPDAPATVQAATSWQPYDGAIEGFVHEDGI
CCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHEHHHHH
RTLLRVTRYPAGSEPGAKPVYVLDQMIEAGS
HHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MRAVFLAPALLAAGVTACGSGASPDPPGFSHAAARAPVAVPPDTDNVPLRAALRAQHWHL
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCEECCCCCCCCCHHHHHHHHHHHH
QRASDAHGTALRSLFVDGVPPVQLDFSDQRIQVSQTCNALGANYSVAEAHVQIGRVVSSK
CCCCCCHHHHHHHHHHCCCCCEEECCCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHH
RMCADARRMAQERAASDLLSGRFAVIMDNAAAAPRLTLTRSDGTVLIFGGTPTADTRYGG
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCEEEEECCCCCCCCCCCC
PGQTLLIEVAAETVPCVSDPARRCLQVREHAPDAPATVQAATSWQPYDGAIEGFVHEDGI
CCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHEHHHHH
RTLLRVTRYPAGSEPGAKPVYVLDQMIEAGS
HHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA