Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226867
Identifier: 21226867
GI number: 21226867
Start: 913006
End: 913971
Strand: Reverse
Name: 21226867
Synonym: MM_0765
Alternate gene names: NA
Gene position: 913971-913006 (Counterclockwise)
Preceding gene: 21226868
Following gene: 21226864
Centisome position: 22.31
GC content: 39.65
Gene sequence:
>966_bases TTGATTAATATACATGTTTCCGGTGTTCACAATATGGGTTTGGTTGACTTTTTTAAAAATAAAGTAAAACACTCTCAAAA ATCCCCCAAATTGAATTATTCTACAAACGGCACTTCTATATCAATAGGTGAGTTTACAGGGGAATATCATCAGTCATCAA AAGGTAGGTTCATTTTAGCGTGGAAAAGTTCAGGTGACAACGGAAAATACATTTTGCTGGATCGAGGGAAGATAAAACTT CAGGCTAAGATGAGGCACCCTGATAATGGAATGGTTTCAAACTCGGGAGTGTTTATACTCAGCGACCTGACCTCCAAGGG CATGTATGGCGTATTCCACGTAATTAATTCTGATGGAGAAACTCTGATAAAACAAAGGTGCAGGGCAAATCTGGGTTCTG CCGGAATTTCAGATGATGGGCGTTTTGCTGTTTGTCAGGCTCTGGAAAGTACCAGCAAGTCGGATAGCTGCAAACTTTTT TTCTTTGATATAAAGAACAGAAAACTATTGTGGAAAAAAGTGCCTGAAACTATAGGAGCCGAGCTTAACTGGGCAAAAAG CTACCGTTTTGATACTAAAAGAAAAGCCCTGTATCTGATACACGATAAGAATAGGACTTACCGCTACACCTTCGAAGGGA CTTTCCTTGATTCTAAACTATACCGGCATGACTGCATTAATTCTGGAAACGATATCGAATTTCTTGAAGCACTTAATGGG TTAAAATCAGAGCTCTCTGAAAGTACCGACCCTCAAGAGTATGTTGACCTTATAGTTCCTCTGGAAAAAGGATTGAAAAG GTTCTCTGACAGGGATACCAGGTCAAAAATCCACAGGGTTCTCGGGGAAATATCCCTTTTACAGGGAAATAATGCAGAAG CGATAAAGCATTTTGAAACCGCATTGAAACTTAATCCCAGGGTGGGAGTGAAGAGGACACTTGAAAAATTAAAGAAAACT GGTTAA
Upstream 100 bases:
>100_bases AAACTCCAGAAAGTTCCGGGAACTGGCTAAAAAAAGGAAATAGAAAACGATCAGATTCAGAAACATTATAAAGAATCAGA TGTTTATACCTGAATAGTTT
Downstream 100 bases:
>100_bases TCTGACAGTGTTATATTGGAGTGTACGAACCAGAATTAAATTTCTTTTTTTGAATTTATGAGATTTTTCCACGAAAAAAT AGCCTCTAAGTCTGATCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MINIHVSGVHNMGLVDFFKNKVKHSQKSPKLNYSTNGTSISIGEFTGEYHQSSKGRFILAWKSSGDNGKYILLDRGKIKL QAKMRHPDNGMVSNSGVFILSDLTSKGMYGVFHVINSDGETLIKQRCRANLGSAGISDDGRFAVCQALESTSKSDSCKLF FFDIKNRKLLWKKVPETIGAELNWAKSYRFDTKRKALYLIHDKNRTYRYTFEGTFLDSKLYRHDCINSGNDIEFLEALNG LKSELSESTDPQEYVDLIVPLEKGLKRFSDRDTRSKIHRVLGEISLLQGNNAEAIKHFETALKLNPRVGVKRTLEKLKKT G
Sequences:
>Translated_321_residues MINIHVSGVHNMGLVDFFKNKVKHSQKSPKLNYSTNGTSISIGEFTGEYHQSSKGRFILAWKSSGDNGKYILLDRGKIKL QAKMRHPDNGMVSNSGVFILSDLTSKGMYGVFHVINSDGETLIKQRCRANLGSAGISDDGRFAVCQALESTSKSDSCKLF FFDIKNRKLLWKKVPETIGAELNWAKSYRFDTKRKALYLIHDKNRTYRYTFEGTFLDSKLYRHDCINSGNDIEFLEALNG LKSELSESTDPQEYVDLIVPLEKGLKRFSDRDTRSKIHRVLGEISLLQGNNAEAIKHFETALKLNPRVGVKRTLEKLKKT G >Mature_321_residues MINIHVSGVHNMGLVDFFKNKVKHSQKSPKLNYSTNGTSISIGEFTGEYHQSSKGRFILAWKSSGDNGKYILLDRGKIKL QAKMRHPDNGMVSNSGVFILSDLTSKGMYGVFHVINSDGETLIKQRCRANLGSAGISDDGRFAVCQALESTSKSDSCKLF FFDIKNRKLLWKKVPETIGAELNWAKSYRFDTKRKALYLIHDKNRTYRYTFEGTFLDSKLYRHDCINSGNDIEFLEALNG LKSELSESTDPQEYVDLIVPLEKGLKRFSDRDTRSKIHRVLGEISLLQGNNAEAIKHFETALKLNPRVGVKRTLEKLKKT G
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36324; Mature: 36324
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINIHVSGVHNMGLVDFFKNKVKHSQKSPKLNYSTNGTSISIGEFTGEYHQSSKGRFILA CEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEECCCCCEEEECCCCCHHHCCCCCCEEEE WKSSGDNGKYILLDRGKIKLQAKMRHPDNGMVSNSGVFILSDLTSKGMYGVFHVINSDGE ECCCCCCCCEEEEECCEEEEEEEECCCCCCEECCCCEEEEECCCCCCCEEEEEEECCCHH TLIKQRCRANLGSAGISDDGRFAVCQALESTSKSDSCKLFFFDIKNRKLLWKKVPETIGA HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCEEHHHHCHHHHCC ELNWAKSYRFDTKRKALYLIHDKNRTYRYTFEGTFLDSKLYRHDCINSGNDIEFLEALNG CCCCHHHCCCCCCCCEEEEEEECCCEEEEEEECEEECHHHHHHHHCCCCCCHHHHHHHHH LKSELSESTDPQEYVDLIVPLEKGLKRFSDRDTRSKIHRVLGEISLLQGNNAEAIKHFET HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEECCCCHHHHHHHHH ALKLNPRVGVKRTLEKLKKTG HHCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MINIHVSGVHNMGLVDFFKNKVKHSQKSPKLNYSTNGTSISIGEFTGEYHQSSKGRFILA CEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEECCCCCEEEECCCCCHHHCCCCCCEEEE WKSSGDNGKYILLDRGKIKLQAKMRHPDNGMVSNSGVFILSDLTSKGMYGVFHVINSDGE ECCCCCCCCEEEEECCEEEEEEEECCCCCCEECCCCEEEEECCCCCCCEEEEEEECCCHH TLIKQRCRANLGSAGISDDGRFAVCQALESTSKSDSCKLFFFDIKNRKLLWKKVPETIGA HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCEEHHHHCHHHHCC ELNWAKSYRFDTKRKALYLIHDKNRTYRYTFEGTFLDSKLYRHDCINSGNDIEFLEALNG CCCCHHHCCCCCCCCEEEEEEECCCEEEEEEECEEECHHHHHHHHCCCCCCHHHHHHHHH LKSELSESTDPQEYVDLIVPLEKGLKRFSDRDTRSKIHRVLGEISLLQGNNAEAIKHFET HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEECCCCHHHHHHHHH ALKLNPRVGVKRTLEKLKKTG HHCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA