| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226804
Identifier: 21226804
GI number: 21226804
Start: 846843
End: 847976
Strand: Direct
Name: 21226804
Synonym: MM_0702
Alternate gene names: NA
Gene position: 846843-847976 (Clockwise)
Preceding gene: 21226803
Following gene: 21226805
Centisome position: 20.67
GC content: 46.12
Gene sequence:
>1134_bases ATGCACCCTGACAGGCGATTGATTTATGTTGCAGTTTTTGCAATCATGGGTCTTTCCAATGCCGTAATCCCTATTCTTCC GGAACTTGCAGCCCGCTACCACAGTATGTACGGTGAGTTTGCATCAAGCCTGCTTTTTTCAGGGTACTTTCTGGGAGCCC TTGCAACAATGCTCCCTTTCGGCATCCTCTCTGACAGGTTCGGAAACCTGAAGTTCATAGGGCTTGGTATCGCCCTTACA GTTGTTTCAGGAGTTTTTATATTTTTATCCGAAAACCTGTGGATTCTTATTTTTTCCAGGTTTGTCGAAGGTGCTGCCTG TGGAGCTTTTTTCCCTGCAGCATTTTCCTCACTCTCAAAGTGCAAAGACCCCGGACGCTGTATGGGAGAATTCACCTTTC TTTTCAATGCAGGTCTGGCTGCGGGAGCTCTGTTCTCAGGCCTGCTTGCAGACATCTTCCTGAAAAGCGCTGTCCTCATA TTCACTTTGTTTGCCCTGCTTTCGGGAATTCCCCTCCTTTACAGGCTCGAGGAACTATTTAACCCGAAAAAAACAGGAAC GAACCCAAAATCACTGTCAGGCCAGGATTCTCTAAAATCCCATTTCAAGCATTCTTTCATAAAAATTACAGGGCTCATTT CCCGCCGTAACTCAGGGATCTGGTTGGGTTCGTTCCTGCTTAACGGAGCAGTTGGAGTTCTCATAGCTTACTACCCCGAC TACAGCCTTGAAATTCTGTCAAAAGCCCGGCTCGGAGGCGCAATTGCAAGCCTCTACATCTGCGCTATGGTCACTTCCCT TCTGGCAGGACGTTTTAAAGTAAAGGAAAAAACAATAATCCGCATAGGCCTGGCTTTTTCTGCCCTTGGGGCTTTTTTTG CGATCAAATATCCATTTTTTGGATTCTCAAGCCTTGGAGGCGGATCAGGGGTTGCAATGGTAGGCTTTGCCCTGGCTGTA GCAAGAATGAATGCGGACAGAGGGCTTGCAATGGGATTATTTAATACAACTATATATGCAGGGCTTTCCTTACTTCCAAT TGTTGCAGGGTTCCTGACAGAGACCCTGAGTTTGAAAGAATTATTTCTGGTAAACGGCTGTATTCTTACAGTGGCTCTTC TGTTGAAAAATTGA
Upstream 100 bases:
>100_bases GTCTAAAAGAAAAAATCTCAGGCATTCAAAAAGGAAATAACAGGCTCTGGAAAAAGATCTACGATAAGAAACTTATACGA GATTGCGAGTTTTTAGTTTT
Downstream 100 bases:
>100_bases AAAGAGATCCTGCATTCTTATATGCATCAGAGCGCTTCCAGGGCATCCCCGGTATTATCAGTTTCCTGAAGGCAATTACA GAAATTAATTACTGATCAAA
Product: permease
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Permease; Multidrug Efflux Protein; Sugar Transport Family Protein
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MHPDRRLIYVAVFAIMGLSNAVIPILPELAARYHSMYGEFASSLLFSGYFLGALATMLPFGILSDRFGNLKFIGLGIALT VVSGVFIFLSENLWILIFSRFVEGAACGAFFPAAFSSLSKCKDPGRCMGEFTFLFNAGLAAGALFSGLLADIFLKSAVLI FTLFALLSGIPLLYRLEELFNPKKTGTNPKSLSGQDSLKSHFKHSFIKITGLISRRNSGIWLGSFLLNGAVGVLIAYYPD YSLEILSKARLGGAIASLYICAMVTSLLAGRFKVKEKTIIRIGLAFSALGAFFAIKYPFFGFSSLGGGSGVAMVGFALAV ARMNADRGLAMGLFNTTIYAGLSLLPIVAGFLTETLSLKELFLVNGCILTVALLLKN
Sequences:
>Translated_377_residues MHPDRRLIYVAVFAIMGLSNAVIPILPELAARYHSMYGEFASSLLFSGYFLGALATMLPFGILSDRFGNLKFIGLGIALT VVSGVFIFLSENLWILIFSRFVEGAACGAFFPAAFSSLSKCKDPGRCMGEFTFLFNAGLAAGALFSGLLADIFLKSAVLI FTLFALLSGIPLLYRLEELFNPKKTGTNPKSLSGQDSLKSHFKHSFIKITGLISRRNSGIWLGSFLLNGAVGVLIAYYPD YSLEILSKARLGGAIASLYICAMVTSLLAGRFKVKEKTIIRIGLAFSALGAFFAIKYPFFGFSSLGGGSGVAMVGFALAV ARMNADRGLAMGLFNTTIYAGLSLLPIVAGFLTETLSLKELFLVNGCILTVALLLKN >Mature_377_residues MHPDRRLIYVAVFAIMGLSNAVIPILPELAARYHSMYGEFASSLLFSGYFLGALATMLPFGILSDRFGNLKFIGLGIALT VVSGVFIFLSENLWILIFSRFVEGAACGAFFPAAFSSLSKCKDPGRCMGEFTFLFNAGLAAGALFSGLLADIFLKSAVLI FTLFALLSGIPLLYRLEELFNPKKTGTNPKSLSGQDSLKSHFKHSFIKITGLISRRNSGIWLGSFLLNGAVGVLIAYYPD YSLEILSKARLGGAIASLYICAMVTSLLAGRFKVKEKTIIRIGLAFSALGAFFAIKYPFFGFSSLGGGSGVAMVGFALAV ARMNADRGLAMGLFNTTIYAGLSLLPIVAGFLTETLSLKELFLVNGCILTVALLLKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40438; Mature: 40438
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPDRRLIYVAVFAIMGLSNAVIPILPELAARYHSMYGEFASSLLFSGYFLGALATMLPF CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GILSDRFGNLKFIGLGIALTVVSGVFIFLSENLWILIFSRFVEGAACGAFFPAAFSSLSK HHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH CKDPGRCMGEFTFLFNAGLAAGALFSGLLADIFLKSAVLIFTLFALLSGIPLLYRLEELF CCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHC NPKKTGTNPKSLSGQDSLKSHFKHSFIKITGLISRRNSGIWLGSFLLNGAVGVLIAYYPD CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHEEEEECCC YSLEILSKARLGGAIASLYICAMVTSLLAGRFKVKEKTIIRIGLAFSALGAFFAIKYPFF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHEEHHHHHHHHHHHHHHHCCCC GFSSLGGGSGVAMVGFALAVARMNADRGLAMGLFNTTIYAGLSLLPIVAGFLTETLSLKE CCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFLVNGCILTVALLLKN HHHHHHHHHHHHHHHCC >Mature Secondary Structure MHPDRRLIYVAVFAIMGLSNAVIPILPELAARYHSMYGEFASSLLFSGYFLGALATMLPF CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GILSDRFGNLKFIGLGIALTVVSGVFIFLSENLWILIFSRFVEGAACGAFFPAAFSSLSK HHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH CKDPGRCMGEFTFLFNAGLAAGALFSGLLADIFLKSAVLIFTLFALLSGIPLLYRLEELF CCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHC NPKKTGTNPKSLSGQDSLKSHFKHSFIKITGLISRRNSGIWLGSFLLNGAVGVLIAYYPD CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHEEEEECCC YSLEILSKARLGGAIASLYICAMVTSLLAGRFKVKEKTIIRIGLAFSALGAFFAIKYPFF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHEEHHHHHHHHHHHHHHHCCCC GFSSLGGGSGVAMVGFALAVARMNADRGLAMGLFNTTIYAGLSLLPIVAGFLTETLSLKE CCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFLVNGCILTVALLLKN HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA