Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226804

Identifier: 21226804

GI number: 21226804

Start: 846843

End: 847976

Strand: Direct

Name: 21226804

Synonym: MM_0702

Alternate gene names: NA

Gene position: 846843-847976 (Clockwise)

Preceding gene: 21226803

Following gene: 21226805

Centisome position: 20.67

GC content: 46.12

Gene sequence:

>1134_bases
ATGCACCCTGACAGGCGATTGATTTATGTTGCAGTTTTTGCAATCATGGGTCTTTCCAATGCCGTAATCCCTATTCTTCC
GGAACTTGCAGCCCGCTACCACAGTATGTACGGTGAGTTTGCATCAAGCCTGCTTTTTTCAGGGTACTTTCTGGGAGCCC
TTGCAACAATGCTCCCTTTCGGCATCCTCTCTGACAGGTTCGGAAACCTGAAGTTCATAGGGCTTGGTATCGCCCTTACA
GTTGTTTCAGGAGTTTTTATATTTTTATCCGAAAACCTGTGGATTCTTATTTTTTCCAGGTTTGTCGAAGGTGCTGCCTG
TGGAGCTTTTTTCCCTGCAGCATTTTCCTCACTCTCAAAGTGCAAAGACCCCGGACGCTGTATGGGAGAATTCACCTTTC
TTTTCAATGCAGGTCTGGCTGCGGGAGCTCTGTTCTCAGGCCTGCTTGCAGACATCTTCCTGAAAAGCGCTGTCCTCATA
TTCACTTTGTTTGCCCTGCTTTCGGGAATTCCCCTCCTTTACAGGCTCGAGGAACTATTTAACCCGAAAAAAACAGGAAC
GAACCCAAAATCACTGTCAGGCCAGGATTCTCTAAAATCCCATTTCAAGCATTCTTTCATAAAAATTACAGGGCTCATTT
CCCGCCGTAACTCAGGGATCTGGTTGGGTTCGTTCCTGCTTAACGGAGCAGTTGGAGTTCTCATAGCTTACTACCCCGAC
TACAGCCTTGAAATTCTGTCAAAAGCCCGGCTCGGAGGCGCAATTGCAAGCCTCTACATCTGCGCTATGGTCACTTCCCT
TCTGGCAGGACGTTTTAAAGTAAAGGAAAAAACAATAATCCGCATAGGCCTGGCTTTTTCTGCCCTTGGGGCTTTTTTTG
CGATCAAATATCCATTTTTTGGATTCTCAAGCCTTGGAGGCGGATCAGGGGTTGCAATGGTAGGCTTTGCCCTGGCTGTA
GCAAGAATGAATGCGGACAGAGGGCTTGCAATGGGATTATTTAATACAACTATATATGCAGGGCTTTCCTTACTTCCAAT
TGTTGCAGGGTTCCTGACAGAGACCCTGAGTTTGAAAGAATTATTTCTGGTAAACGGCTGTATTCTTACAGTGGCTCTTC
TGTTGAAAAATTGA

Upstream 100 bases:

>100_bases
GTCTAAAAGAAAAAATCTCAGGCATTCAAAAAGGAAATAACAGGCTCTGGAAAAAGATCTACGATAAGAAACTTATACGA
GATTGCGAGTTTTTAGTTTT

Downstream 100 bases:

>100_bases
AAAGAGATCCTGCATTCTTATATGCATCAGAGCGCTTCCAGGGCATCCCCGGTATTATCAGTTTCCTGAAGGCAATTACA
GAAATTAATTACTGATCAAA

Product: permease

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Permease; Multidrug Efflux Protein; Sugar Transport Family Protein

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MHPDRRLIYVAVFAIMGLSNAVIPILPELAARYHSMYGEFASSLLFSGYFLGALATMLPFGILSDRFGNLKFIGLGIALT
VVSGVFIFLSENLWILIFSRFVEGAACGAFFPAAFSSLSKCKDPGRCMGEFTFLFNAGLAAGALFSGLLADIFLKSAVLI
FTLFALLSGIPLLYRLEELFNPKKTGTNPKSLSGQDSLKSHFKHSFIKITGLISRRNSGIWLGSFLLNGAVGVLIAYYPD
YSLEILSKARLGGAIASLYICAMVTSLLAGRFKVKEKTIIRIGLAFSALGAFFAIKYPFFGFSSLGGGSGVAMVGFALAV
ARMNADRGLAMGLFNTTIYAGLSLLPIVAGFLTETLSLKELFLVNGCILTVALLLKN

Sequences:

>Translated_377_residues
MHPDRRLIYVAVFAIMGLSNAVIPILPELAARYHSMYGEFASSLLFSGYFLGALATMLPFGILSDRFGNLKFIGLGIALT
VVSGVFIFLSENLWILIFSRFVEGAACGAFFPAAFSSLSKCKDPGRCMGEFTFLFNAGLAAGALFSGLLADIFLKSAVLI
FTLFALLSGIPLLYRLEELFNPKKTGTNPKSLSGQDSLKSHFKHSFIKITGLISRRNSGIWLGSFLLNGAVGVLIAYYPD
YSLEILSKARLGGAIASLYICAMVTSLLAGRFKVKEKTIIRIGLAFSALGAFFAIKYPFFGFSSLGGGSGVAMVGFALAV
ARMNADRGLAMGLFNTTIYAGLSLLPIVAGFLTETLSLKELFLVNGCILTVALLLKN
>Mature_377_residues
MHPDRRLIYVAVFAIMGLSNAVIPILPELAARYHSMYGEFASSLLFSGYFLGALATMLPFGILSDRFGNLKFIGLGIALT
VVSGVFIFLSENLWILIFSRFVEGAACGAFFPAAFSSLSKCKDPGRCMGEFTFLFNAGLAAGALFSGLLADIFLKSAVLI
FTLFALLSGIPLLYRLEELFNPKKTGTNPKSLSGQDSLKSHFKHSFIKITGLISRRNSGIWLGSFLLNGAVGVLIAYYPD
YSLEILSKARLGGAIASLYICAMVTSLLAGRFKVKEKTIIRIGLAFSALGAFFAIKYPFFGFSSLGGGSGVAMVGFALAV
ARMNADRGLAMGLFNTTIYAGLSLLPIVAGFLTETLSLKELFLVNGCILTVALLLKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40438; Mature: 40438

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPDRRLIYVAVFAIMGLSNAVIPILPELAARYHSMYGEFASSLLFSGYFLGALATMLPF
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GILSDRFGNLKFIGLGIALTVVSGVFIFLSENLWILIFSRFVEGAACGAFFPAAFSSLSK
HHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH
CKDPGRCMGEFTFLFNAGLAAGALFSGLLADIFLKSAVLIFTLFALLSGIPLLYRLEELF
CCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHC
NPKKTGTNPKSLSGQDSLKSHFKHSFIKITGLISRRNSGIWLGSFLLNGAVGVLIAYYPD
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHEEEEECCC
YSLEILSKARLGGAIASLYICAMVTSLLAGRFKVKEKTIIRIGLAFSALGAFFAIKYPFF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHEEHHHHHHHHHHHHHHHCCCC
GFSSLGGGSGVAMVGFALAVARMNADRGLAMGLFNTTIYAGLSLLPIVAGFLTETLSLKE
CCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFLVNGCILTVALLLKN
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHPDRRLIYVAVFAIMGLSNAVIPILPELAARYHSMYGEFASSLLFSGYFLGALATMLPF
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GILSDRFGNLKFIGLGIALTVVSGVFIFLSENLWILIFSRFVEGAACGAFFPAAFSSLSK
HHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH
CKDPGRCMGEFTFLFNAGLAAGALFSGLLADIFLKSAVLIFTLFALLSGIPLLYRLEELF
CCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHC
NPKKTGTNPKSLSGQDSLKSHFKHSFIKITGLISRRNSGIWLGSFLLNGAVGVLIAYYPD
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHEEEEECCC
YSLEILSKARLGGAIASLYICAMVTSLLAGRFKVKEKTIIRIGLAFSALGAFFAIKYPFF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHEEHHHHHHHHHHHHHHHCCCC
GFSSLGGGSGVAMVGFALAVARMNADRGLAMGLFNTTIYAGLSLLPIVAGFLTETLSLKE
CCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFLVNGCILTVALLLKN
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA