Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is hppA [H]
Identifier: 21226802
GI number: 21226802
Start: 840962
End: 842992
Strand: Reverse
Name: hppA [H]
Synonym: MM_0700
Alternate gene names: 21226802
Gene position: 842992-840962 (Counterclockwise)
Preceding gene: 21226811
Following gene: 21226798
Centisome position: 20.58
GC content: 47.22
Gene sequence:
>2031_bases ATGGATATGTTAATCTACCTTACACCAATATGTGCCCTTATTGGTTTAATTTTTGCAGGTATATCCTACAAAAATGTCCG AAATGAAGGCGAGGGTAACGAACTTATTAAGAAAATTACGGCGGCAATTCATGGTGGAGCTATGGTCTACCTTAACAGGC AATACCGTGCTATCGCTGTCTTTGTCGTTTTTATTGCAATTGTACTTGCGTTAGTTCTGCCGAACGGAGTTCTTACCGCC GCATGTTTCGTGTTTGGTGCAGTGCTTTCCGCAACAGCCGGATACGCAGGGATGCTTACGGCCACTATTGCAAATGGAAG GACCACAAATGCTGCCACAAGAGGCATCGGCCCTGCTTTTAAAGTTTCATTTGCATCAGGCACCGTCATGGGAATGAGTG TCGTGGGCCTTGGTCTCTTTGGATTATCTCTTTCATTTATAATTCTTGGTAATATCTACACAGATATGGATCTGTTCACC CTCCTGAACATTATTGCGGGCTTTTCATTCGGAGCTTCGTCTATAGCTCTCTTTGCCCGTGTAGGCGGCGGAATATTCAC CAAAGCTGCTGATGTCGGAGCTGACCTTGTAGGTAAGGTTGAAGCCGGGATCCCTGAAGATGACCCCAGGAACCCTGCTG TTATTGCTGACAATGTAGGAGACAATGTAGGAGACATTGCGGGAATGGGTGCTGACCTCTATGAGTCCTATGTGGGTTCA ATCATTGCAACCATGCTTCTTGCAGCATCAACCGCAGCAGCAACTTTCCCCGGGATTCCTGTTATGAACGTTGTTATGGT CCCACTTGTTATCGCAGCTGTTGGTATTCTGGCATCTGTTATAGGGACTTTTTTTGTACGCACCAACAAGACAGAATCTT CAGCAATCCATATGGCATTTAATATGGGACTGATTGCCGCGATCGTTCTTACTGTCATTGCTTCATACGTCGTTACAGGC CATCTCCTTGGAGGATACGGGCTTAACGTCTTCTTCTCAACGGTTGCAGGACTGGTTGCAGGCTTCCTTATCGGACAAAT CACCGAGCACTATACATCATATGACAAAAAGCCAACTCTCACTGTTGCCCATTCCTGCCAGACAGGTTCTGCTACAAATG TTATTACAGGATTTGCAAAAGGGATGGAGTCAACTCTCTGGCCCGCTGTCATCATCAGCATTGCAATTTATATCGCATTC CAGCTCGCAGGTCTTTACGGCATAGCTATTGCAGCAGTCGGAATGCTCGCAACACTCGGGATTTCCCTCTCAGTCGATGC TTACGGTCCTGTAGCTGACAATGCAGGTGGCATTGCAGAGATGTCCCACCAGAAGAAAGAGGTGCGCCAGATTACCGATA CCCTTGATGCAGTAGGAAACACCACGGCAGCTATGGGTAAGGGATTTGCAATCGGTTCGGCAGCTCTTACTGCACTTTCA CTCTTTGCTTCATATGCTATTGCAGTAGGCCTCACTTCTATTGACGTTATGAACCCTAACGTATTCATAGGGCTTATAAT AGGCGCAATGCTTCCTTTCCTCTTTTCGTCCATGACCATTCTGGCTGTCGGAAATGCAGCAGGTGAAGTGGTGGTCGAAG TGAGGAGGCAGTTTAAAGAGATCAAAGGCCTTATGGAAGGCAAAGCTGACCCCGACTACAGTAAATGTATTACAATCTCC ACGCATTCTGCTCTTAAAGAGATGATCCCGCCCGGAATTCTTGCTGTTATTGCACCTATTCTGGTAGGACTTGTACTCGG CGCAGGGGCTCTCGGTGGGCTGCTTGCAGGCTCCGTGGTTTCAGGTTTCATGCTTGCAATTACAATGTCCAATGCAGGAG GTTCCTGGGACAATGCAAAGAAATTCATTGAACTTGGAAACTTCGGCGGAAAGGGTTCTGATGCCCACAAAGCGGGTGTA ACCGGCGATACGGTAGGTGACCCTTTCAAAGACACCGCAGGACCTGCAATCAACATCCTCATTAAGCTCATGAGTATTGT GGCTCTTGTGTTTGCACCGCTGTTTATTTGA
Upstream 100 bases:
>100_bases TCAATTTATATACAAAGACTCATTTATTATCGCAAAAATTACTACGGAGATTAATACTTTAAAGTGCTTTTGATGTGTTT TCTGGTAGGATGGTTTAAAT
Downstream 100 bases:
>100_bases TTTCCTTAAATTTTTCCCTTTTTTTCCCTTTTTTTCTTTTTAATTTAGTCTGGATCTTTGCCTGTTTTGTTCTGGTCTTC CTTTCCAGGTTTTCTTTTGC
Product: membrane-bound proton-translocating pyrophosphatase
Products: NA
Alternate protein names: Membrane-bound sodium-translocating pyrophosphatase; Pyrophosphate-energized inorganic pyrophosphatase; Na(+)-PPase [H]
Number of amino acids: Translated: 676; Mature: 676
Protein sequence:
>676_residues MDMLIYLTPICALIGLIFAGISYKNVRNEGEGNELIKKITAAIHGGAMVYLNRQYRAIAVFVVFIAIVLALVLPNGVLTA ACFVFGAVLSATAGYAGMLTATIANGRTTNAATRGIGPAFKVSFASGTVMGMSVVGLGLFGLSLSFIILGNIYTDMDLFT LLNIIAGFSFGASSIALFARVGGGIFTKAADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDIAGMGADLYESYVGS IIATMLLAASTAAATFPGIPVMNVVMVPLVIAAVGILASVIGTFFVRTNKTESSAIHMAFNMGLIAAIVLTVIASYVVTG HLLGGYGLNVFFSTVAGLVAGFLIGQITEHYTSYDKKPTLTVAHSCQTGSATNVITGFAKGMESTLWPAVIISIAIYIAF QLAGLYGIAIAAVGMLATLGISLSVDAYGPVADNAGGIAEMSHQKKEVRQITDTLDAVGNTTAAMGKGFAIGSAALTALS LFASYAIAVGLTSIDVMNPNVFIGLIIGAMLPFLFSSMTILAVGNAAGEVVVEVRRQFKEIKGLMEGKADPDYSKCITIS THSALKEMIPPGILAVIAPILVGLVLGAGALGGLLAGSVVSGFMLAITMSNAGGSWDNAKKFIELGNFGGKGSDAHKAGV TGDTVGDPFKDTAGPAINILIKLMSIVALVFAPLFI
Sequences:
>Translated_676_residues MDMLIYLTPICALIGLIFAGISYKNVRNEGEGNELIKKITAAIHGGAMVYLNRQYRAIAVFVVFIAIVLALVLPNGVLTA ACFVFGAVLSATAGYAGMLTATIANGRTTNAATRGIGPAFKVSFASGTVMGMSVVGLGLFGLSLSFIILGNIYTDMDLFT LLNIIAGFSFGASSIALFARVGGGIFTKAADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDIAGMGADLYESYVGS IIATMLLAASTAAATFPGIPVMNVVMVPLVIAAVGILASVIGTFFVRTNKTESSAIHMAFNMGLIAAIVLTVIASYVVTG HLLGGYGLNVFFSTVAGLVAGFLIGQITEHYTSYDKKPTLTVAHSCQTGSATNVITGFAKGMESTLWPAVIISIAIYIAF QLAGLYGIAIAAVGMLATLGISLSVDAYGPVADNAGGIAEMSHQKKEVRQITDTLDAVGNTTAAMGKGFAIGSAALTALS LFASYAIAVGLTSIDVMNPNVFIGLIIGAMLPFLFSSMTILAVGNAAGEVVVEVRRQFKEIKGLMEGKADPDYSKCITIS THSALKEMIPPGILAVIAPILVGLVLGAGALGGLLAGSVVSGFMLAITMSNAGGSWDNAKKFIELGNFGGKGSDAHKAGV TGDTVGDPFKDTAGPAINILIKLMSIVALVFAPLFI >Mature_676_residues MDMLIYLTPICALIGLIFAGISYKNVRNEGEGNELIKKITAAIHGGAMVYLNRQYRAIAVFVVFIAIVLALVLPNGVLTA ACFVFGAVLSATAGYAGMLTATIANGRTTNAATRGIGPAFKVSFASGTVMGMSVVGLGLFGLSLSFIILGNIYTDMDLFT LLNIIAGFSFGASSIALFARVGGGIFTKAADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDIAGMGADLYESYVGS IIATMLLAASTAAATFPGIPVMNVVMVPLVIAAVGILASVIGTFFVRTNKTESSAIHMAFNMGLIAAIVLTVIASYVVTG HLLGGYGLNVFFSTVAGLVAGFLIGQITEHYTSYDKKPTLTVAHSCQTGSATNVITGFAKGMESTLWPAVIISIAIYIAF QLAGLYGIAIAAVGMLATLGISLSVDAYGPVADNAGGIAEMSHQKKEVRQITDTLDAVGNTTAAMGKGFAIGSAALTALS LFASYAIAVGLTSIDVMNPNVFIGLIIGAMLPFLFSSMTILAVGNAAGEVVVEVRRQFKEIKGLMEGKADPDYSKCITIS THSALKEMIPPGILAVIAPILVGLVLGAGALGGLLAGSVVSGFMLAITMSNAGGSWDNAKKFIELGNFGGKGSDAHKAGV TGDTVGDPFKDTAGPAINILIKLMSIVALVFAPLFI
Specific function: Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane [H]
COG id: COG3808
COG function: function code C; Inorganic pyrophosphatase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004131 [H]
Pfam domain/function: PF03030 H_PPase [H]
EC number: =3.6.1.1 [H]
Molecular weight: Translated: 69222; Mature: 69222
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMLIYLTPICALIGLIFAGISYKNVRNEGEGNELIKKITAAIHGGAMVYLNRQYRAIAV CCEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH FVVFIAIVLALVLPNGVLTAACFVFGAVLSATAGYAGMLTATIANGRTTNAATRGIGPAF HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHEEECCCCCCCCHHCCCCCCE KVSFASGTVMGMSVVGLGLFGLSLSFIILGNIYTDMDLFTLLNIIAGFSFGASSIALFAR EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH VGGGIFTKAADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDIAGMGADLYESYVGS HCCCHHHHHHHHCHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHCCCHHHHHHHHHH IIATMLLAASTAAATFPGIPVMNVVMVPLVIAAVGILASVIGTFFVRTNKTESSAIHMAF HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH NMGLIAAIVLTVIASYVVTGHLLGGYGLNVFFSTVAGLVAGFLIGQITEHYTSYDKKPTL HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE TVAHSCQTGSATNVITGFAKGMESTLWPAVIISIAIYIAFQLAGLYGIAIAAVGMLATLG EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ISLSVDAYGPVADNAGGIAEMSHQKKEVRQITDTLDAVGNTTAAMGKGFAIGSAALTALS CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHH LFASYAIAVGLTSIDVMNPNVFIGLIIGAMLPFLFSSMTILAVGNAAGEVVVEVRRQFKE HHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHCCHHHEEECCCHHHHHHHHHHHHHH IKGLMEGKADPDYSKCITISTHSALKEMIPPGILAVIAPILVGLVLGAGALGGLLAGSVV HHHHHCCCCCCCHHHEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGFMLAITMSNAGGSWDNAKKFIELGNFGGKGSDAHKAGVTGDTVGDPFKDTAGPAINIL HHHHHEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH IKLMSIVALVFAPLFI HHHHHHHHHHHHHHCC >Mature Secondary Structure MDMLIYLTPICALIGLIFAGISYKNVRNEGEGNELIKKITAAIHGGAMVYLNRQYRAIAV CCEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH FVVFIAIVLALVLPNGVLTAACFVFGAVLSATAGYAGMLTATIANGRTTNAATRGIGPAF HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHEEECCCCCCCCHHCCCCCCE KVSFASGTVMGMSVVGLGLFGLSLSFIILGNIYTDMDLFTLLNIIAGFSFGASSIALFAR EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH VGGGIFTKAADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDIAGMGADLYESYVGS HCCCHHHHHHHHCHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHCCCHHHHHHHHHH IIATMLLAASTAAATFPGIPVMNVVMVPLVIAAVGILASVIGTFFVRTNKTESSAIHMAF HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH NMGLIAAIVLTVIASYVVTGHLLGGYGLNVFFSTVAGLVAGFLIGQITEHYTSYDKKPTL HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE TVAHSCQTGSATNVITGFAKGMESTLWPAVIISIAIYIAFQLAGLYGIAIAAVGMLATLG EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ISLSVDAYGPVADNAGGIAEMSHQKKEVRQITDTLDAVGNTTAAMGKGFAIGSAALTALS CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHH LFASYAIAVGLTSIDVMNPNVFIGLIIGAMLPFLFSSMTILAVGNAAGEVVVEVRRQFKE HHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHCCHHHEEECCCHHHHHHHHHHHHHH IKGLMEGKADPDYSKCITISTHSALKEMIPPGILAVIAPILVGLVLGAGALGGLLAGSVV HHHHHCCCCCCCHHHEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGFMLAITMSNAGGSWDNAKKFIELGNFGGKGSDAHKAGVTGDTVGDPFKDTAGPAINIL HHHHHEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH IKLMSIVALVFAPLFI HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11932238 [H]