Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226774

Identifier: 21226774

GI number: 21226774

Start: 807097

End: 807798

Strand: Reverse

Name: 21226774

Synonym: MM_0672

Alternate gene names: NA

Gene position: 807798-807097 (Counterclockwise)

Preceding gene: 21226775

Following gene: 21226773

Centisome position: 19.72

GC content: 33.76

Gene sequence:

>702_bases
TTGATATATCCCTATCATAATTGCCTGGACTCGGCACTAATTCAAAACGGATATATCAAAAATGGAATTAAAAAAACTGC
TATAGTTAATATAGATAGGGACCTTAATGAAATATGTAAGGGGTTTAAGAGGCAATTCAGTAGAGATATAAAAAAAGCTT
CAAAAAAAGAAATAATTATATACGAAAGTCAGAACTATGAGGAAGATATAGACCTTTACTATAATCAGTTCCAGAAACTA
TTAATTGACAGAGTTATCGAAAGGACTGGAAATTGTTATAAGAGAGTATCATATGCCCTGGTTCCATATTCGTATTTTGA
AATGCTCCGTGACGTCCTTTTTCCGAAAAAAATGGCGAGGTTATTCTTTGCAGAATACAATGGAGTAAAAATTGGAGCAT
TAATAAATTTTTACTATAAAGATACTATATATCTGGGTCACACCTCGGTATTGAGAGGCGAATACAACGGTCTTAACGCT
TATAAGCTCTTAATCTGGCACATCATAGTGGATGGAAAGAAAAATGGCTTCAAAAATCTTGATGTAGCGGGCCTTCACCC
TGATGAAACACATGGTCAATATCACTTTAAAATGGGATTTAACGGTCAGGTCAAAGAGATCGGAGTATACAGTAAATCGT
ACAGATATGACGAGATTAAACATGCAAAAGCAATTTATAATGAATTGAGAGGGCTAAAATAA

Upstream 100 bases:

>100_bases
CTGTGTCCCTTCCAGTCTTACCAGTTGTGAAGAGATTTACAGGTTGATGTTTGATTTCATTGATTCGTATAGTAAAAATG
AAAAAAGCATTATGGATCAT

Downstream 100 bases:

>100_bases
TCGTTTTTTCAAATATTACTCCTGGTCTCACCTGGAAAATAGCAGGGATCTCCCACAAAGGCTACTCTGTTATCAGCTTT
TCTTGAATGCCTTTGCTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MIYPYHNCLDSALIQNGYIKNGIKKTAIVNIDRDLNEICKGFKRQFSRDIKKASKKEIIIYESQNYEEDIDLYYNQFQKL
LIDRVIERTGNCYKRVSYALVPYSYFEMLRDVLFPKKMARLFFAEYNGVKIGALINFYYKDTIYLGHTSVLRGEYNGLNA
YKLLIWHIIVDGKKNGFKNLDVAGLHPDETHGQYHFKMGFNGQVKEIGVYSKSYRYDEIKHAKAIYNELRGLK

Sequences:

>Translated_233_residues
MIYPYHNCLDSALIQNGYIKNGIKKTAIVNIDRDLNEICKGFKRQFSRDIKKASKKEIIIYESQNYEEDIDLYYNQFQKL
LIDRVIERTGNCYKRVSYALVPYSYFEMLRDVLFPKKMARLFFAEYNGVKIGALINFYYKDTIYLGHTSVLRGEYNGLNA
YKLLIWHIIVDGKKNGFKNLDVAGLHPDETHGQYHFKMGFNGQVKEIGVYSKSYRYDEIKHAKAIYNELRGLK
>Mature_233_residues
MIYPYHNCLDSALIQNGYIKNGIKKTAIVNIDRDLNEICKGFKRQFSRDIKKASKKEIIIYESQNYEEDIDLYYNQFQKL
LIDRVIERTGNCYKRVSYALVPYSYFEMLRDVLFPKKMARLFFAEYNGVKIGALINFYYKDTIYLGHTSVLRGEYNGLNA
YKLLIWHIIVDGKKNGFKNLDVAGLHPDETHGQYHFKMGFNGQVKEIGVYSKSYRYDEIKHAKAIYNELRGLK

Specific function: Unknown

COG id: COG2348

COG function: function code V; Uncharacterized protein involved in methicillin resistance

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27413; Mature: 27413

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYPYHNCLDSALIQNGYIKNGIKKTAIVNIDRDLNEICKGFKRQFSRDIKKASKKEIII
CCCCHHHHHHHHHHHCCHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEE
YESQNYEEDIDLYYNQFQKLLIDRVIERTGNCYKRVSYALVPYSYFEMLRDVLFPKKMAR
EECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCHHHHHH
LFFAEYNGVKIGALINFYYKDTIYLGHTSVLRGEYNGLNAYKLLIWHIIVDGKKNGFKNL
HHHHHCCCEEEEHEEEEEECCEEEECCHHHCCCCCCCCHHHHHHHHHEEECCCCCCCCCC
DVAGLHPDETHGQYHFKMGFNGQVKEIGVYSKSYRYDEIKHAKAIYNELRGLK
CEECCCCCCCCCEEEEEECCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIYPYHNCLDSALIQNGYIKNGIKKTAIVNIDRDLNEICKGFKRQFSRDIKKASKKEIII
CCCCHHHHHHHHHHHCCHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEE
YESQNYEEDIDLYYNQFQKLLIDRVIERTGNCYKRVSYALVPYSYFEMLRDVLFPKKMAR
EECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCHHHHHH
LFFAEYNGVKIGALINFYYKDTIYLGHTSVLRGEYNGLNAYKLLIWHIIVDGKKNGFKNL
HHHHHCCCEEEEHEEEEEECCEEEECCHHHCCCCCCCCHHHHHHHHHEEECCCCCCCCCC
DVAGLHPDETHGQYHFKMGFNGQVKEIGVYSKSYRYDEIKHAKAIYNELRGLK
CEECCCCCCCCCEEEEEECCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA