Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226774
Identifier: 21226774
GI number: 21226774
Start: 807097
End: 807798
Strand: Reverse
Name: 21226774
Synonym: MM_0672
Alternate gene names: NA
Gene position: 807798-807097 (Counterclockwise)
Preceding gene: 21226775
Following gene: 21226773
Centisome position: 19.72
GC content: 33.76
Gene sequence:
>702_bases TTGATATATCCCTATCATAATTGCCTGGACTCGGCACTAATTCAAAACGGATATATCAAAAATGGAATTAAAAAAACTGC TATAGTTAATATAGATAGGGACCTTAATGAAATATGTAAGGGGTTTAAGAGGCAATTCAGTAGAGATATAAAAAAAGCTT CAAAAAAAGAAATAATTATATACGAAAGTCAGAACTATGAGGAAGATATAGACCTTTACTATAATCAGTTCCAGAAACTA TTAATTGACAGAGTTATCGAAAGGACTGGAAATTGTTATAAGAGAGTATCATATGCCCTGGTTCCATATTCGTATTTTGA AATGCTCCGTGACGTCCTTTTTCCGAAAAAAATGGCGAGGTTATTCTTTGCAGAATACAATGGAGTAAAAATTGGAGCAT TAATAAATTTTTACTATAAAGATACTATATATCTGGGTCACACCTCGGTATTGAGAGGCGAATACAACGGTCTTAACGCT TATAAGCTCTTAATCTGGCACATCATAGTGGATGGAAAGAAAAATGGCTTCAAAAATCTTGATGTAGCGGGCCTTCACCC TGATGAAACACATGGTCAATATCACTTTAAAATGGGATTTAACGGTCAGGTCAAAGAGATCGGAGTATACAGTAAATCGT ACAGATATGACGAGATTAAACATGCAAAAGCAATTTATAATGAATTGAGAGGGCTAAAATAA
Upstream 100 bases:
>100_bases CTGTGTCCCTTCCAGTCTTACCAGTTGTGAAGAGATTTACAGGTTGATGTTTGATTTCATTGATTCGTATAGTAAAAATG AAAAAAGCATTATGGATCAT
Downstream 100 bases:
>100_bases TCGTTTTTTCAAATATTACTCCTGGTCTCACCTGGAAAATAGCAGGGATCTCCCACAAAGGCTACTCTGTTATCAGCTTT TCTTGAATGCCTTTGCTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MIYPYHNCLDSALIQNGYIKNGIKKTAIVNIDRDLNEICKGFKRQFSRDIKKASKKEIIIYESQNYEEDIDLYYNQFQKL LIDRVIERTGNCYKRVSYALVPYSYFEMLRDVLFPKKMARLFFAEYNGVKIGALINFYYKDTIYLGHTSVLRGEYNGLNA YKLLIWHIIVDGKKNGFKNLDVAGLHPDETHGQYHFKMGFNGQVKEIGVYSKSYRYDEIKHAKAIYNELRGLK
Sequences:
>Translated_233_residues MIYPYHNCLDSALIQNGYIKNGIKKTAIVNIDRDLNEICKGFKRQFSRDIKKASKKEIIIYESQNYEEDIDLYYNQFQKL LIDRVIERTGNCYKRVSYALVPYSYFEMLRDVLFPKKMARLFFAEYNGVKIGALINFYYKDTIYLGHTSVLRGEYNGLNA YKLLIWHIIVDGKKNGFKNLDVAGLHPDETHGQYHFKMGFNGQVKEIGVYSKSYRYDEIKHAKAIYNELRGLK >Mature_233_residues MIYPYHNCLDSALIQNGYIKNGIKKTAIVNIDRDLNEICKGFKRQFSRDIKKASKKEIIIYESQNYEEDIDLYYNQFQKL LIDRVIERTGNCYKRVSYALVPYSYFEMLRDVLFPKKMARLFFAEYNGVKIGALINFYYKDTIYLGHTSVLRGEYNGLNA YKLLIWHIIVDGKKNGFKNLDVAGLHPDETHGQYHFKMGFNGQVKEIGVYSKSYRYDEIKHAKAIYNELRGLK
Specific function: Unknown
COG id: COG2348
COG function: function code V; Uncharacterized protein involved in methicillin resistance
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27413; Mature: 27413
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYPYHNCLDSALIQNGYIKNGIKKTAIVNIDRDLNEICKGFKRQFSRDIKKASKKEIII CCCCHHHHHHHHHHHCCHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEE YESQNYEEDIDLYYNQFQKLLIDRVIERTGNCYKRVSYALVPYSYFEMLRDVLFPKKMAR EECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCHHHHHH LFFAEYNGVKIGALINFYYKDTIYLGHTSVLRGEYNGLNAYKLLIWHIIVDGKKNGFKNL HHHHHCCCEEEEHEEEEEECCEEEECCHHHCCCCCCCCHHHHHHHHHEEECCCCCCCCCC DVAGLHPDETHGQYHFKMGFNGQVKEIGVYSKSYRYDEIKHAKAIYNELRGLK CEECCCCCCCCCEEEEEECCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIYPYHNCLDSALIQNGYIKNGIKKTAIVNIDRDLNEICKGFKRQFSRDIKKASKKEIII CCCCHHHHHHHHHHHCCHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEE YESQNYEEDIDLYYNQFQKLLIDRVIERTGNCYKRVSYALVPYSYFEMLRDVLFPKKMAR EECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCHHHHHH LFFAEYNGVKIGALINFYYKDTIYLGHTSVLRGEYNGLNAYKLLIWHIIVDGKKNGFKNL HHHHHCCCEEEEHEEEEEECCEEEECCHHHCCCCCCCCHHHHHHHHHEEECCCCCCCCCC DVAGLHPDETHGQYHFKMGFNGQVKEIGVYSKSYRYDEIKHAKAIYNELRGLK CEECCCCCCCCCEEEEEECCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA