| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is xanB [H]
Identifier: 21226762
GI number: 21226762
Start: 790489
End: 791796
Strand: Reverse
Name: xanB [H]
Synonym: MM_0660
Alternate gene names: 21226762
Gene position: 791796-790489 (Counterclockwise)
Preceding gene: 21226763
Following gene: 21226761
Centisome position: 19.33
GC content: 43.96
Gene sequence:
>1308_bases ATGTATCCCAAACAATTTTTAAAATTCGGGGAAACTTCACTTTTTCAGGAGACTGTACTTCGATGTCTTGAGGTTTCGGA CATCTCTGAAGTCTTTGTCGTAACCAATGAAGCCCAGAAGTTTTTCGTTATTGGGCAGATCAAAGAAGCAGGGTATTCAA TTCCTCCTGAGAATATATTGATAGAGCCTGAAGGCAAGAACACGCTTCCTGCAATTTTCTTTGGGATGAAAGAAATTGAA AAAAAATTCGGGGATTCAATTGTAGGAGTATTCTCCTCAGACCATGTCCTTGACAGGGCTGCAATGGCGACAATTTCTTC AGCTGAAAATCTGGCTTCGGATTATCTCGTCACTTTTGGGGTTGTTCCTACCTTCCCTCATACCGGGTATGGCTACATCA AAGCTTCAGAGGCATGCAGTCCGGGCTACAGGGTCTCAGAATTCAGGGAAAAGCCTGATTTTGAAACCGCAAAAAAATAC ATTGAGGAAGGGTGCCTGTGGAACAGCGGGATGTTCCTTTTTGAGACCAGGCTCTTTTTTGAAGAAGCCAGAAAACATGC TCCTTCAGTTTATGGCTGCTTTGAGAAAGAAGGAGATATTAATCAAATTTACGAATGTGTGGATAACATCTCCATCGACT ACGGCATAATGGAGAAATCCGATAAGGTTGCGGTTGTAAGGCTGGATCATAAATGGAGCGACCTTGGAAATTTTGCAGCA ATTTATGATGAGCTCGAAAAGGATTCTGTAGGAAATGTCATCCATGATTGTGACCCGATGCTTCTTAACTCCGACGGGAA CCTGGTGTATTCGAGATGCGGCAAAATTGTTTCTTTGATTGATGTTAAGGATATGGTTGTCGTTGATACAAGTGATGCCC TGTTAATATGCCCCAAATCCAGCAGCCAGAAAGTAAAAGAAATAGTTTCCGAGCTGAAAGGCAGAAAAGACGAACGGGCG TTTATAGGACAGACAGTTTACAGGCCATGGGGGTCATATACATTGCTCGATGCCTCTCCCGGGCACAAAATTAAGAATAT CACCGTGCTCTCAGACCATAAGCTGAGCCTTCAATTACATTACCACAGGAGCGAACACTGGGTGGTCGTAAAAGGTATGG CATGCGTGGAAGTTGATGGAAAGCAGTTTTTCCTGGGACCTGGAGAAAGCACATTTATCCGGGCAGGACAAAAACACAGG CTGTCGAATCCCGGAAAGCTCCCTCTTGAAATTATCGAGGTGCAGCTGGGAGAGCTTGTGGATGAAGAGGATATTGTCAG GTTTGATGATGTGTATGGGAGAAGATGA
Upstream 100 bases:
>100_bases AATTGGATAGATTTTATCAACATCTAAAGGAGATGACAGGATTAAGTCGATAATTCTTGCAGGTGGTTCAGGGACAAGGC TCTGGCCTCTCAGCCGGGAA
Downstream 100 bases:
>100_bases GCCTATTAGATTCATGCTAAGATTAATTAAACAGTTGATTGTTCTTAAGTAAACATTAAATATTTTAATACATAGTTATC AGGGTATAAAATGACTAAAA
Product: mannose-1-phosphate guanylyl transferase
Products: NA
Alternate protein names: Mannose-6-phosphate isomerase; Phosphohexomutase; Phosphomannose isomerase; PMI; Mannose-1-phosphate guanylyl transferase; GDP-mannose pyrophosphorylase; GMP; GMPP [H]
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MYPKQFLKFGETSLFQETVLRCLEVSDISEVFVVTNEAQKFFVIGQIKEAGYSIPPENILIEPEGKNTLPAIFFGMKEIE KKFGDSIVGVFSSDHVLDRAAMATISSAENLASDYLVTFGVVPTFPHTGYGYIKASEACSPGYRVSEFREKPDFETAKKY IEEGCLWNSGMFLFETRLFFEEARKHAPSVYGCFEKEGDINQIYECVDNISIDYGIMEKSDKVAVVRLDHKWSDLGNFAA IYDELEKDSVGNVIHDCDPMLLNSDGNLVYSRCGKIVSLIDVKDMVVVDTSDALLICPKSSSQKVKEIVSELKGRKDERA FIGQTVYRPWGSYTLLDASPGHKIKNITVLSDHKLSLQLHYHRSEHWVVVKGMACVEVDGKQFFLGPGESTFIRAGQKHR LSNPGKLPLEIIEVQLGELVDEEDIVRFDDVYGRR
Sequences:
>Translated_435_residues MYPKQFLKFGETSLFQETVLRCLEVSDISEVFVVTNEAQKFFVIGQIKEAGYSIPPENILIEPEGKNTLPAIFFGMKEIE KKFGDSIVGVFSSDHVLDRAAMATISSAENLASDYLVTFGVVPTFPHTGYGYIKASEACSPGYRVSEFREKPDFETAKKY IEEGCLWNSGMFLFETRLFFEEARKHAPSVYGCFEKEGDINQIYECVDNISIDYGIMEKSDKVAVVRLDHKWSDLGNFAA IYDELEKDSVGNVIHDCDPMLLNSDGNLVYSRCGKIVSLIDVKDMVVVDTSDALLICPKSSSQKVKEIVSELKGRKDERA FIGQTVYRPWGSYTLLDASPGHKIKNITVLSDHKLSLQLHYHRSEHWVVVKGMACVEVDGKQFFLGPGESTFIRAGQKHR LSNPGKLPLEIIEVQLGELVDEEDIVRFDDVYGRR >Mature_435_residues MYPKQFLKFGETSLFQETVLRCLEVSDISEVFVVTNEAQKFFVIGQIKEAGYSIPPENILIEPEGKNTLPAIFFGMKEIE KKFGDSIVGVFSSDHVLDRAAMATISSAENLASDYLVTFGVVPTFPHTGYGYIKASEACSPGYRVSEFREKPDFETAKKY IEEGCLWNSGMFLFETRLFFEEARKHAPSVYGCFEKEGDINQIYECVDNISIDYGIMEKSDKVAVVRLDHKWSDLGNFAA IYDELEKDSVGNVIHDCDPMLLNSDGNLVYSRCGKIVSLIDVKDMVVVDTSDALLICPKSSSQKVKEIVSELKGRKDERA FIGQTVYRPWGSYTLLDASPGHKIKNITVLSDHKLSLQLHYHRSEHWVVVKGMACVEVDGKQFFLGPGESTFIRAGQKHR LSNPGKLPLEIIEVQLGELVDEEDIVRFDDVYGRR
Specific function: Involved in xanthan production [H]
COG id: COG0836
COG function: function code M; Mannose-1-phosphate guanylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannose-6-phosphate isomerase type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1788362, Length=459, Percent_Identity=38.562091503268, Blast_Score=293, Evalue=2e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR006375 - InterPro: IPR001538 - InterPro: IPR005835 - InterPro: IPR014710 [H]
Pfam domain/function: PF01050 MannoseP_isomer; PF00483 NTP_transferase [H]
EC number: =5.3.1.8; =2.7.7.13 [H]
Molecular weight: Translated: 48988; Mature: 48988
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYPKQFLKFGETSLFQETVLRCLEVSDISEVFVVTNEAQKFFVIGQIKEAGYSIPPENIL CCHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEEHHCCCCCCCCCEE IEPEGKNTLPAIFFGMKEIEKKFGDSIVGVFSSDHVLDRAAMATISSAENLASDYLVTFG ECCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEEEC VVPTFPHTGYGYIKASEACSPGYRVSEFREKPDFETAKKYIEEGCLWNSGMFLFETRLFF CCCCCCCCCCCEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHHCCEECCCHHHHHHHHHH EEARKHAPSVYGCFEKEGDINQIYECVDNISIDYGIMEKSDKVAVVRLDHKWSDLGNFAA HHHHHHCCCEEECCCCCCCHHHHHHHHHCCEECEEEECCCCCEEEEEECCCHHHHCHHHH IYDELEKDSVGNVIHDCDPMLLNSDGNLVYSRCGKIVSLIDVKDMVVVDTSDALLICPKS HHHHHHHCCCCCHHHCCCCEEECCCCCCHHHHHHHHEEHEEECCEEEEECCCEEEEECCC SSQKVKEIVSELKGRKDERAFIGQTVYRPWGSYTLLDASPGHKIKNITVLSDHKLSLQLH CHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEEECCEEEEEEE YHRSEHWVVVKGMACVEVDGKQFFLGPGESTFIRAGQKHRLSNPGKLPLEIIEVQLGELV EECCCCEEEEECEEEEEECCCEEEECCCCCCEEECCCHHCCCCCCCCCHHHHHHHHHHHC DEEDIVRFDDVYGRR CCCCCEEHHHHCCCC >Mature Secondary Structure MYPKQFLKFGETSLFQETVLRCLEVSDISEVFVVTNEAQKFFVIGQIKEAGYSIPPENIL CCHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEEHHCCCCCCCCCEE IEPEGKNTLPAIFFGMKEIEKKFGDSIVGVFSSDHVLDRAAMATISSAENLASDYLVTFG ECCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEEEC VVPTFPHTGYGYIKASEACSPGYRVSEFREKPDFETAKKYIEEGCLWNSGMFLFETRLFF CCCCCCCCCCCEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHHCCEECCCHHHHHHHHHH EEARKHAPSVYGCFEKEGDINQIYECVDNISIDYGIMEKSDKVAVVRLDHKWSDLGNFAA HHHHHHCCCEEECCCCCCCHHHHHHHHHCCEECEEEECCCCCEEEEEECCCHHHHCHHHH IYDELEKDSVGNVIHDCDPMLLNSDGNLVYSRCGKIVSLIDVKDMVVVDTSDALLICPKS HHHHHHHCCCCCHHHCCCCEEECCCCCCHHHHHHHHEEHEEECCEEEEECCCEEEEECCC SSQKVKEIVSELKGRKDERAFIGQTVYRPWGSYTLLDASPGHKIKNITVLSDHKLSLQLH CHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEEECCEEEEEEE YHRSEHWVVVKGMACVEVDGKQFFLGPGESTFIRAGQKHRLSNPGKLPLEIIEVQLGELV EECCCCEEEEECEEEEEECCCEEEECCCCCCEEECCCHHCCCCCCCCCHHHHHHHHHHHC DEEDIVRFDDVYGRR CCCCCEEHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1370280; 11589581 [H]