Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
---|---|
Accession | NC_003901 |
Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is 21226743
Identifier: 21226743
GI number: 21226743
Start: 768946
End: 769215
Strand: Reverse
Name: 21226743
Synonym: MM_0641
Alternate gene names: NA
Gene position: 769215-768946 (Counterclockwise)
Preceding gene: 21226744
Following gene: 21226741
Centisome position: 18.78
GC content: 46.67
Gene sequence:
>270_bases ATGCAGAACTTTAACTCAGAATCCGAAGCCTCGAAAATTTACAGGAATCCTGTTGACGCCGGCGTCAAAAGCCCGGAGTT TTATCATCTGAGAGTAAACAGGCATGAAGAAGATGAAGAAGTTCGTGAGCCGCTCATCAATAACATGGTCCTTTTATCTG GCTTAACCTCGGGGTCTCTATATAGGGAGTCTCTATATAGGGATATACATTCCCTGGCCTGCCCCTTCTTAAGGGCGCGG TCGGACTCCGGCAAGAATAATGCTGGTTAA
Upstream 100 bases:
>100_bases GAAGTGGGTAATGCGGTTGCAAAGTATATAATGCAGAACCTTTAACTCTGAATAATGCAGAAACTTAATTCAGAATGATG CAGAGCCTTAATTCAGGATA
Downstream 100 bases:
>100_bases AGAGTAGCCTGTTCGGAAAAAACAGGAAATTCCTTTAAAAATTATTCGTATGATATCTGCAGTTCATTCTTAACTTTTTT CCTGATCCTTAATTGTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 89
Protein sequence:
>89_residues MQNFNSESEASKIYRNPVDAGVKSPEFYHLRVNRHEEDEEVREPLINNMVLLSGLTSGSLYRESLYRDIHSLACPFLRAR SDSGKNNAG
Sequences:
>Translated_89_residues MQNFNSESEASKIYRNPVDAGVKSPEFYHLRVNRHEEDEEVREPLINNMVLLSGLTSGSLYRESLYRDIHSLACPFLRAR SDSGKNNAG >Mature_89_residues MQNFNSESEASKIYRNPVDAGVKSPEFYHLRVNRHEEDEEVREPLINNMVLLSGLTSGSLYRESLYRDIHSLACPFLRAR SDSGKNNAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10128; Mature: 10128
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNFNSESEASKIYRNPVDAGVKSPEFYHLRVNRHEEDEEVREPLINNMVLLSGLTSGSL CCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHH YRESLYRDIHSLACPFLRARSDSGKNNAG HHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MQNFNSESEASKIYRNPVDAGVKSPEFYHLRVNRHEEDEEVREPLINNMVLLSGLTSGSL CCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHH YRESLYRDIHSLACPFLRARSDSGKNNAG HHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA