Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226715
Identifier: 21226715
GI number: 21226715
Start: 744273
End: 745310
Strand: Reverse
Name: 21226715
Synonym: MM_0613
Alternate gene names: NA
Gene position: 745310-744273 (Counterclockwise)
Preceding gene: 21226716
Following gene: 21226714
Centisome position: 18.19
GC content: 41.23
Gene sequence:
>1038_bases ATGTCAAAGCTAGTATGTAAGCGGTGTGTTCTGGATTCTGATATTCCAGGCATAGAAATCAATAAAGAAAGCGGTCTCTG CCATTTTTGCGAGACATATGTCCCTCTTTCTTTACAGGAAAAGGAAGAATATCTTAAAAGGATTGAAGGGCTTTTTAAAA AATACAGTGGTACGGGCAACTATGATGTGATATTTGCACTTTCGGGGGGAAAAGACTCTTCATACACGCTTTACAAGCTC AAAAAAGATTATCCCTTCCTGAAAATACTTGCCGTCCAGTTTGATAACGGGTTCACTTCGGATTATGCCGTAATAAACGC AAAAAAAATGTGCGAGATTACCGGATGCGACTATTTTAAGCTGTCAATGGAAAAAGAGGTGCTTTATGACCTCTTCCGGA AAGCAGCCGAATCTTATGATGCATTCCCGAAGTTTGCTAAATACAGGGCAAGCGACATCTGCAATATCTGTATCAGTGTA ATTAAACAGAAGCTTATAGAACAGGCAATAATTCAGAAAGCGCCTTTTATTGTATTTGCTTTTACAGCAGGGCAGTCTCC CAATCCCATAATCAATCTGTCAGCTAATTTCATACAGTGGTCAAGGAACCTCTTTGAAAAGCAGCTTCAAAAAATAGGTG TTGAGGACAGGGACGAGCAGTTCATTATTAAAAATGAGGTCATTAAAAATATAGGTGAGTCTGCTCCATCCATTCTGCAC CCGCTTTGCCTGTGGGAGTACAGTGAGGATAAAGTGCTTGAGACAGTAATTGGGCTCGGGTGGAAGCCTCCTGAGCTTAA TGACAGCAATTCTACAAATTGCACGCTGAATTCTTTTGCATGTTATAACCATCTGGAAAAGTATGGTTTCCATCCATATG CTTTTGACATAGCTGGGCTTGTCAGAAGCGGGGAGATGCCAAGGGGAGAAGGGCTGGAAAAGCTCCACCAGGAACTTTCA GAGCCACTGATAGAGGAAGCCGCAGAAAAGCTGGAGGTTAAGGTAAATAATCCGAAAAAAATCCTGCTTAAAATTTAA
Upstream 100 bases:
>100_bases CCGGGTTATCTCTATCCGAGGGAGATCCTCTTCATTGACCATCTCCCACTGAGCGAGAACGGGAAAATATCCAACAGGTC TATTATAGAGGAGTACCAGC
Downstream 100 bases:
>100_bases GCTGTTTCTCTGAGCAAAGGACAGTTTAAATAAAGGGATCCGAAGGCTCAATTGCAGGTTCAATAATCATTTACCTGCAG TTAATCAGCATTTACCTACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MSKLVCKRCVLDSDIPGIEINKESGLCHFCETYVPLSLQEKEEYLKRIEGLFKKYSGTGNYDVIFALSGGKDSSYTLYKL KKDYPFLKILAVQFDNGFTSDYAVINAKKMCEITGCDYFKLSMEKEVLYDLFRKAAESYDAFPKFAKYRASDICNICISV IKQKLIEQAIIQKAPFIVFAFTAGQSPNPIINLSANFIQWSRNLFEKQLQKIGVEDRDEQFIIKNEVIKNIGESAPSILH PLCLWEYSEDKVLETVIGLGWKPPELNDSNSTNCTLNSFACYNHLEKYGFHPYAFDIAGLVRSGEMPRGEGLEKLHQELS EPLIEEAAEKLEVKVNNPKKILLKI
Sequences:
>Translated_345_residues MSKLVCKRCVLDSDIPGIEINKESGLCHFCETYVPLSLQEKEEYLKRIEGLFKKYSGTGNYDVIFALSGGKDSSYTLYKL KKDYPFLKILAVQFDNGFTSDYAVINAKKMCEITGCDYFKLSMEKEVLYDLFRKAAESYDAFPKFAKYRASDICNICISV IKQKLIEQAIIQKAPFIVFAFTAGQSPNPIINLSANFIQWSRNLFEKQLQKIGVEDRDEQFIIKNEVIKNIGESAPSILH PLCLWEYSEDKVLETVIGLGWKPPELNDSNSTNCTLNSFACYNHLEKYGFHPYAFDIAGLVRSGEMPRGEGLEKLHQELS EPLIEEAAEKLEVKVNNPKKILLKI >Mature_344_residues SKLVCKRCVLDSDIPGIEINKESGLCHFCETYVPLSLQEKEEYLKRIEGLFKKYSGTGNYDVIFALSGGKDSSYTLYKLK KDYPFLKILAVQFDNGFTSDYAVINAKKMCEITGCDYFKLSMEKEVLYDLFRKAAESYDAFPKFAKYRASDICNICISVI KQKLIEQAIIQKAPFIVFAFTAGQSPNPIINLSANFIQWSRNLFEKQLQKIGVEDRDEQFIIKNEVIKNIGESAPSILHP LCLWEYSEDKVLETVIGLGWKPPELNDSNSTNCTLNSFACYNHLEKYGFHPYAFDIAGLVRSGEMPRGEGLEKLHQELSE PLIEEAAEKLEVKVNNPKKILLKI
Specific function: Unknown
COG id: COG0037
COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39276; Mature: 39144
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLVCKRCVLDSDIPGIEINKESGLCHFCETYVPLSLQEKEEYLKRIEGLFKKYSGTGN CCHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC YDVIFALSGGKDSSYTLYKLKKDYPFLKILAVQFDNGFTSDYAVINAKKMCEITGCDYFK EEEEEEEECCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCEEEEEHHHHEEECCCCEEE LSMEKEVLYDLFRKAAESYDAFPKFAKYRASDICNICISVIKQKLIEQAIIQKAPFIVFA ECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE FTAGQSPNPIINLSANFIQWSRNLFEKQLQKIGVEDRDEQFIIKNEVIKNIGESAPSILH EECCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHCCCHHHHH PLCLWEYSEDKVLETVIGLGWKPPELNDSNSTNCTLNSFACYNHLEKYGFHPYAFDIAGL HHHHEECCCHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHH VRSGEMPRGEGLEKLHQELSEPLIEEAAEKLEVKVNNPKKILLKI HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEC >Mature Secondary Structure SKLVCKRCVLDSDIPGIEINKESGLCHFCETYVPLSLQEKEEYLKRIEGLFKKYSGTGN CHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC YDVIFALSGGKDSSYTLYKLKKDYPFLKILAVQFDNGFTSDYAVINAKKMCEITGCDYFK EEEEEEEECCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCEEEEEHHHHEEECCCCEEE LSMEKEVLYDLFRKAAESYDAFPKFAKYRASDICNICISVIKQKLIEQAIIQKAPFIVFA ECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE FTAGQSPNPIINLSANFIQWSRNLFEKQLQKIGVEDRDEQFIIKNEVIKNIGESAPSILH EECCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHCCCHHHHH PLCLWEYSEDKVLETVIGLGWKPPELNDSNSTNCTLNSFACYNHLEKYGFHPYAFDIAGL HHHHEECCCHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHH VRSGEMPRGEGLEKLHQELSEPLIEEAAEKLEVKVNNPKKILLKI HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA