Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
---|---|
Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is pstS [H]
Identifier: 21226680
GI number: 21226680
Start: 704446
End: 705393
Strand: Reverse
Name: pstS [H]
Synonym: MM_0578
Alternate gene names: 21226680
Gene position: 705393-704446 (Counterclockwise)
Preceding gene: 21226681
Following gene: 21226679
Centisome position: 17.22
GC content: 46.94
Gene sequence:
>948_bases ATGGTAAATAAATTAAAAACATACGCAGTCCTTACGTTACTGGTGTTTGGACTTGTATTTCTGGGAATTGGATGCACTGG AAATGATAGTGGTGAGTCCCAGGTTGAGGAAACCTCTTCCGCTGGAGCCACTGAAGCTGAAGTCACCTCAGACGAAGCCC CTGAAGCTGAAACCTCCTCAACCGAGTCACAGAGTATTTCTCTGAAAGGTTCAGATACGGTTCTCCCCCTTGCTCAGGCT GAAGCTGAAGAATTCATGCTTGAAAACCCTGACAAAAGTGTAACTGTCACCGGCGGCGGTTCAGGTGTTGGGATTACAGC TCTAATTGACGGTGAGGTTGACATTGCTACAGCGTCGCGAGAAATTAAAGCTGAAGAAATAGAAGCTGCTCAGTCTAACG TCATCACCCCTGTGGAGACAACAATTGCTTATGACGGCATTTCAGTTGTTGTAAACCCCGGGAACCCTGTTTCTGAACTT ACCTTTGACCAGCTGCGCGGCATCTACAATGGAACAATTAGTAACTGGCAGGATGTAGGCGGAGAGGACGCAGAGATTGT GGTAATTTCCAGGGACAGCAGTTCAGGGACTTACGAATACTTCAAGGAAGAGGTTTTACAGGGAGATGAATACAGACCTG ATGCACTTACCCAGCCTGCAACAGGGGGAATAGTCGGAGAGGTTTCTCAAAACACCAATGCAATCGGTTACATAGGCATT GCATACCTTGATCAAAGTGTAAAAGCTCTGAACCTTGATGGTGGAAATGGTCCTGTAGTCCCGAGCTCTGAAAATGTGCT TAGCGGTGCATACCCTCTTTCAAGGTCTCTTTACTTCTACACCAATGGTGAACCCTCAGGCCTTACGAAGGAATTCGTTG ACTTTGTACTCAGCGAAACAGGACAGAGCCTGGTAACTGAAGTAGGGTACTTCCCTGCAGATCAGTAA
Upstream 100 bases:
>100_bases GTCGAGAATCTTTATATATGAACTTTCAATTGTGTAGTGTACTGTATCATTTAGGATGTAAATTGTTGATTTGTTGTATT TTTAATGGAGTATGTGTAAC
Downstream 100 bases:
>100_bases TAAAAACCTACAAGCTGTTACAATAAAACCACTTTAAGGTAAAACATGTTTAGCAGGAATTATAAGGAGAAGACGATTGA GTCGGCGCTTTTCTCAGTAA
Product: phosphate-binding protein
Products: NA
Alternate protein names: PBP [H]
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MVNKLKTYAVLTLLVFGLVFLGIGCTGNDSGESQVEETSSAGATEAEVTSDEAPEAETSSTESQSISLKGSDTVLPLAQA EAEEFMLENPDKSVTVTGGGSGVGITALIDGEVDIATASREIKAEEIEAAQSNVITPVETTIAYDGISVVVNPGNPVSEL TFDQLRGIYNGTISNWQDVGGEDAEIVVISRDSSSGTYEYFKEEVLQGDEYRPDALTQPATGGIVGEVSQNTNAIGYIGI AYLDQSVKALNLDGGNGPVVPSSENVLSGAYPLSRSLYFYTNGEPSGLTKEFVDFVLSETGQSLVTEVGYFPADQ
Sequences:
>Translated_315_residues MVNKLKTYAVLTLLVFGLVFLGIGCTGNDSGESQVEETSSAGATEAEVTSDEAPEAETSSTESQSISLKGSDTVLPLAQA EAEEFMLENPDKSVTVTGGGSGVGITALIDGEVDIATASREIKAEEIEAAQSNVITPVETTIAYDGISVVVNPGNPVSEL TFDQLRGIYNGTISNWQDVGGEDAEIVVISRDSSSGTYEYFKEEVLQGDEYRPDALTQPATGGIVGEVSQNTNAIGYIGI AYLDQSVKALNLDGGNGPVVPSSENVLSGAYPLSRSLYFYTNGEPSGLTKEFVDFVLSETGQSLVTEVGYFPADQ >Mature_315_residues MVNKLKTYAVLTLLVFGLVFLGIGCTGNDSGESQVEETSSAGATEAEVTSDEAPEAETSSTESQSISLKGSDTVLPLAQA EAEEFMLENPDKSVTVTGGGSGVGITALIDGEVDIATASREIKAEEIEAAQSNVITPVETTIAYDGISVVVNPGNPVSEL TFDQLRGIYNGTISNWQDVGGEDAEIVVISRDSSSGTYEYFKEEVLQGDEYRPDALTQPATGGIVGEVSQNTNAIGYIGI AYLDQSVKALNLDGGNGPVVPSSENVLSGAYPLSRSLYFYTNGEPSGLTKEFVDFVLSETGQSLVTEVGYFPADQ
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 33031; Mature: 33031
Theoretical pI: Translated: 3.61; Mature: 3.61
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNKLKTYAVLTLLVFGLVFLGIGCTGNDSGESQVEETSSAGATEAEVTSDEAPEAETSS CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC TESQSISLKGSDTVLPLAQAEAEEFMLENPDKSVTVTGGGSGVGITALIDGEVDIATASR CCCCEEEECCCCCEEEHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCCEEEEECCC EIKAEEIEAAQSNVITPVETTIAYDGISVVVNPGNPVSELTFDQLRGIYNGTISNWQDVG HHHHHHHHHHHHCCCCCHHHEEEECCEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHCC GEDAEIVVISRDSSSGTYEYFKEEVLQGDEYRPDALTQPATGGIVGEVSQNTNAIGYIGI CCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEE AYLDQSVKALNLDGGNGPVVPSSENVLSGAYPLSRSLYFYTNGEPSGLTKEFVDFVLSET EEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHC GQSLVTEVGYFPADQ CHHHHHHHCCCCCCC >Mature Secondary Structure MVNKLKTYAVLTLLVFGLVFLGIGCTGNDSGESQVEETSSAGATEAEVTSDEAPEAETSS CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC TESQSISLKGSDTVLPLAQAEAEEFMLENPDKSVTVTGGGSGVGITALIDGEVDIATASR CCCCEEEECCCCCEEEHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCCEEEEECCC EIKAEEIEAAQSNVITPVETTIAYDGISVVVNPGNPVSELTFDQLRGIYNGTISNWQDVG HHHHHHHHHHHHCCCCCHHHEEEECCEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHCC GEDAEIVVISRDSSSGTYEYFKEEVLQGDEYRPDALTQPATGGIVGEVSQNTNAIGYIGI CCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEE AYLDQSVKALNLDGGNGPVVPSSENVLSGAYPLSRSLYFYTNGEPSGLTKEFVDFVLSET EEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHC GQSLVTEVGYFPADQ CHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]