Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226662
Identifier: 21226662
GI number: 21226662
Start: 684626
End: 685276
Strand: Reverse
Name: 21226662
Synonym: MM_0560
Alternate gene names: NA
Gene position: 685276-684626 (Counterclockwise)
Preceding gene: 21226663
Following gene: 21226661
Centisome position: 16.73
GC content: 34.25
Gene sequence:
>651_bases TTGTATATAAACTACACTTGTCTACAGTATCCAGACGTCCGTCTGCGTATGCGTGATGGTTCAAAGCTAAGAGGTTTCTT CGCAAAAAAATATTCCTCTGAAGAGCTTATGCATAATCATAAAGAAGATAAGAACATTTACAGGTATCCCTTAGTACAGT ATAAAGTGATTGATAGTATATCTACACTTCTCGGATTAGACGAAGGTTCAAATCTTATTTTGGATATCGGTATTTGTGAA GAAGAAATAAGTATCGAAGGTGCTCGATTTTGTCTCGATAGAGCAGAGATTATTACTGAATCTACTTTCTTTGGCACTAC TGATAGGATCAATCAGTATGTTTTTAAAACTCCTTGGCTCGCTTTAAATCAGGAAAACATAACAAAGTATAACGCTGCAG ATGAAATTGAGAAAGACGATTTATTAACAAAGATTCTGATTGGAAATTTGCTGTCAATGGCAAAATATCTGAACTTTAGG GTTGAAGATGAAATTAGAGTTAAGCTGAACGTCAAGCCAATGAGATTAAATTTTAAGGGCAAAGTAATGGCCGGGTTTAG GGGTGAATTCAAATCTAACTTTAGTCTCCCTGATTACATTGGAATTGGAAAATCTGTTTCTAGAGGATATGGTTCAATTA AAAAAATATAA
Upstream 100 bases:
>100_bases TCTTCCGCTAAAGTCTGGTACTAGAGAACTTTATTCACCTAGTATAGGTATAGTTTCAGAAGCCAAATCTATTGAAATTT TATGATATGGAGACTTGTTT
Downstream 100 bases:
>100_bases GGGGGTGATATTGTGCAGCTCGTAATCAATACCCGCGGTTCATTTTTGAAAAAGCAAAACAACTGCTTTCTTGTAAAAGT TGATGACAAGACCTTCGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MYINYTCLQYPDVRLRMRDGSKLRGFFAKKYSSEELMHNHKEDKNIYRYPLVQYKVIDSISTLLGLDEGSNLILDIGICE EEISIEGARFCLDRAEIITESTFFGTTDRINQYVFKTPWLALNQENITKYNAADEIEKDDLLTKILIGNLLSMAKYLNFR VEDEIRVKLNVKPMRLNFKGKVMAGFRGEFKSNFSLPDYIGIGKSVSRGYGSIKKI
Sequences:
>Translated_216_residues MYINYTCLQYPDVRLRMRDGSKLRGFFAKKYSSEELMHNHKEDKNIYRYPLVQYKVIDSISTLLGLDEGSNLILDIGICE EEISIEGARFCLDRAEIITESTFFGTTDRINQYVFKTPWLALNQENITKYNAADEIEKDDLLTKILIGNLLSMAKYLNFR VEDEIRVKLNVKPMRLNFKGKVMAGFRGEFKSNFSLPDYIGIGKSVSRGYGSIKKI >Mature_216_residues MYINYTCLQYPDVRLRMRDGSKLRGFFAKKYSSEELMHNHKEDKNIYRYPLVQYKVIDSISTLLGLDEGSNLILDIGICE EEISIEGARFCLDRAEIITESTFFGTTDRINQYVFKTPWLALNQENITKYNAADEIEKDDLLTKILIGNLLSMAKYLNFR VEDEIRVKLNVKPMRLNFKGKVMAGFRGEFKSNFSLPDYIGIGKSVSRGYGSIKKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1086 N-terminal region [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24973; Mature: 24973
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYINYTCLQYPDVRLRMRDGSKLRGFFAKKYSSEELMHNHKEDKNIYRYPLVQYKVIDSI CEEEEEEEECCCEEEEECCCCHHHHHHHHHCCCHHHHHCCCCCCCEEECCCEEHHHHHHH STLLGLDEGSNLILDIGICEEEISIEGARFCLDRAEIITESTFFGTTDRINQYVFKTPWL HHHHCCCCCCCEEEEEEECCHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHEEECCCE ALNQENITKYNAADEIEKDDLLTKILIGNLLSMAKYLNFRVEDEIRVKLNVKPMRLNFKG EECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCEEECCEEEEEEEEEEEEEECCC KVMAGFRGEFKSNFSLPDYIGIGKSVSRGYGSIKKI EEEECCCCCCCCCCCCCHHHCCCCHHHHCCCCCCCC >Mature Secondary Structure MYINYTCLQYPDVRLRMRDGSKLRGFFAKKYSSEELMHNHKEDKNIYRYPLVQYKVIDSI CEEEEEEEECCCEEEEECCCCHHHHHHHHHCCCHHHHHCCCCCCCEEECCCEEHHHHHHH STLLGLDEGSNLILDIGICEEEISIEGARFCLDRAEIITESTFFGTTDRINQYVFKTPWL HHHHCCCCCCCEEEEEEECCHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHEEECCCE ALNQENITKYNAADEIEKDDLLTKILIGNLLSMAKYLNFRVEDEIRVKLNVKPMRLNFKG EECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCEEECCEEEEEEEEEEEEEECCC KVMAGFRGEFKSNFSLPDYIGIGKSVSRGYGSIKKI EEEECCCCCCCCCCCCCHHHCCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]