Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226662

Identifier: 21226662

GI number: 21226662

Start: 684626

End: 685276

Strand: Reverse

Name: 21226662

Synonym: MM_0560

Alternate gene names: NA

Gene position: 685276-684626 (Counterclockwise)

Preceding gene: 21226663

Following gene: 21226661

Centisome position: 16.73

GC content: 34.25

Gene sequence:

>651_bases
TTGTATATAAACTACACTTGTCTACAGTATCCAGACGTCCGTCTGCGTATGCGTGATGGTTCAAAGCTAAGAGGTTTCTT
CGCAAAAAAATATTCCTCTGAAGAGCTTATGCATAATCATAAAGAAGATAAGAACATTTACAGGTATCCCTTAGTACAGT
ATAAAGTGATTGATAGTATATCTACACTTCTCGGATTAGACGAAGGTTCAAATCTTATTTTGGATATCGGTATTTGTGAA
GAAGAAATAAGTATCGAAGGTGCTCGATTTTGTCTCGATAGAGCAGAGATTATTACTGAATCTACTTTCTTTGGCACTAC
TGATAGGATCAATCAGTATGTTTTTAAAACTCCTTGGCTCGCTTTAAATCAGGAAAACATAACAAAGTATAACGCTGCAG
ATGAAATTGAGAAAGACGATTTATTAACAAAGATTCTGATTGGAAATTTGCTGTCAATGGCAAAATATCTGAACTTTAGG
GTTGAAGATGAAATTAGAGTTAAGCTGAACGTCAAGCCAATGAGATTAAATTTTAAGGGCAAAGTAATGGCCGGGTTTAG
GGGTGAATTCAAATCTAACTTTAGTCTCCCTGATTACATTGGAATTGGAAAATCTGTTTCTAGAGGATATGGTTCAATTA
AAAAAATATAA

Upstream 100 bases:

>100_bases
TCTTCCGCTAAAGTCTGGTACTAGAGAACTTTATTCACCTAGTATAGGTATAGTTTCAGAAGCCAAATCTATTGAAATTT
TATGATATGGAGACTTGTTT

Downstream 100 bases:

>100_bases
GGGGGTGATATTGTGCAGCTCGTAATCAATACCCGCGGTTCATTTTTGAAAAAGCAAAACAACTGCTTTCTTGTAAAAGT
TGATGACAAGACCTTCGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MYINYTCLQYPDVRLRMRDGSKLRGFFAKKYSSEELMHNHKEDKNIYRYPLVQYKVIDSISTLLGLDEGSNLILDIGICE
EEISIEGARFCLDRAEIITESTFFGTTDRINQYVFKTPWLALNQENITKYNAADEIEKDDLLTKILIGNLLSMAKYLNFR
VEDEIRVKLNVKPMRLNFKGKVMAGFRGEFKSNFSLPDYIGIGKSVSRGYGSIKKI

Sequences:

>Translated_216_residues
MYINYTCLQYPDVRLRMRDGSKLRGFFAKKYSSEELMHNHKEDKNIYRYPLVQYKVIDSISTLLGLDEGSNLILDIGICE
EEISIEGARFCLDRAEIITESTFFGTTDRINQYVFKTPWLALNQENITKYNAADEIEKDDLLTKILIGNLLSMAKYLNFR
VEDEIRVKLNVKPMRLNFKGKVMAGFRGEFKSNFSLPDYIGIGKSVSRGYGSIKKI
>Mature_216_residues
MYINYTCLQYPDVRLRMRDGSKLRGFFAKKYSSEELMHNHKEDKNIYRYPLVQYKVIDSISTLLGLDEGSNLILDIGICE
EEISIEGARFCLDRAEIITESTFFGTTDRINQYVFKTPWLALNQENITKYNAADEIEKDDLLTKILIGNLLSMAKYLNFR
VEDEIRVKLNVKPMRLNFKGKVMAGFRGEFKSNFSLPDYIGIGKSVSRGYGSIKKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ1086 N-terminal region [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24973; Mature: 24973

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYINYTCLQYPDVRLRMRDGSKLRGFFAKKYSSEELMHNHKEDKNIYRYPLVQYKVIDSI
CEEEEEEEECCCEEEEECCCCHHHHHHHHHCCCHHHHHCCCCCCCEEECCCEEHHHHHHH
STLLGLDEGSNLILDIGICEEEISIEGARFCLDRAEIITESTFFGTTDRINQYVFKTPWL
HHHHCCCCCCCEEEEEEECCHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHEEECCCE
ALNQENITKYNAADEIEKDDLLTKILIGNLLSMAKYLNFRVEDEIRVKLNVKPMRLNFKG
EECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCEEECCEEEEEEEEEEEEEECCC
KVMAGFRGEFKSNFSLPDYIGIGKSVSRGYGSIKKI
EEEECCCCCCCCCCCCCHHHCCCCHHHHCCCCCCCC
>Mature Secondary Structure
MYINYTCLQYPDVRLRMRDGSKLRGFFAKKYSSEELMHNHKEDKNIYRYPLVQYKVIDSI
CEEEEEEEECCCEEEEECCCCHHHHHHHHHCCCHHHHHCCCCCCCEEECCCEEHHHHHHH
STLLGLDEGSNLILDIGICEEEISIEGARFCLDRAEIITESTFFGTTDRINQYVFKTPWL
HHHHCCCCCCCEEEEEEECCHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHEEECCCE
ALNQENITKYNAADEIEKDDLLTKILIGNLLSMAKYLNFRVEDEIRVKLNVKPMRLNFKG
EECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCEEECCEEEEEEEEEEEEEECCC
KVMAGFRGEFKSNFSLPDYIGIGKSVSRGYGSIKKI
EEEECCCCCCCCCCCCCHHHCCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]