Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226601

Identifier: 21226601

GI number: 21226601

Start: 621816

End: 622169

Strand: Direct

Name: 21226601

Synonym: MM_0499

Alternate gene names: NA

Gene position: 621816-622169 (Clockwise)

Preceding gene: 21226600

Following gene: 21226602

Centisome position: 15.18

GC content: 38.7

Gene sequence:

>354_bases
ATGGATGCATTCGTCAAAGATAAAATGAATCAAAGTATGAATGATAGAAAACAATATCATTCCCGATTTTTAGAAAATTG
CAGTACTTATAACTCATTTCTGGAGTTAGAAAAGAAAGCATTTGAAGCTGGCAGCCTTTCACGGAAACATAAGGAACTCA
TGGCCCTGTCTATTTCTATTGTTACCAAATGTGAGCCCTGTATAGAATGGCATGTCCAACAGGCCTGTTTAACAGGTGCA
TCAGATAAAGAGATATATGAGACTATAGATGTGGCCCTCGAAATGGGAGGGGGCCCTGCTGCTTATTCTCGATTTGCATT
GAATGCACTGGATTTTTACAAAAAACAGGCATGA

Upstream 100 bases:

>100_bases
GTTTTTAAGCCTGAGAAGAAATAATCAAGTAAATGTTAGATTCTGAGAAGAAATAATCAAGTAAATGTTTGATTAATACT
GTAGATCAGGATGTGATCGC

Downstream 100 bases:

>100_bases
AATTCTTGGAATAACAGGCACAAAAAATGAAAGTATCTGGAAGTACTTTCATGCCAGGAAAAAAATAGAAAAACTGTAAC
TTCCTTTTTTAATTACTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Alkylhydroperoxidase Like Protein AhpD Family; Alkylhydroperoxidase Like Protein; Alkylhydroperoxidase AhpD Core; Decarboxylase

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MDAFVKDKMNQSMNDRKQYHSRFLENCSTYNSFLELEKKAFEAGSLSRKHKELMALSISIVTKCEPCIEWHVQQACLTGA
SDKEIYETIDVALEMGGGPAAYSRFALNALDFYKKQA

Sequences:

>Translated_117_residues
MDAFVKDKMNQSMNDRKQYHSRFLENCSTYNSFLELEKKAFEAGSLSRKHKELMALSISIVTKCEPCIEWHVQQACLTGA
SDKEIYETIDVALEMGGGPAAYSRFALNALDFYKKQA
>Mature_117_residues
MDAFVKDKMNQSMNDRKQYHSRFLENCSTYNSFLELEKKAFEAGSLSRKHKELMALSISIVTKCEPCIEWHVQQACLTGA
SDKEIYETIDVALEMGGGPAAYSRFALNALDFYKKQA

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13312; Mature: 13312

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAFVKDKMNQSMNDRKQYHSRFLENCSTYNSFLELEKKAFEAGSLSRKHKELMALSISI
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
VTKCEPCIEWHVQQACLTGASDKEIYETIDVALEMGGGPAAYSRFALNALDFYKKQA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDAFVKDKMNQSMNDRKQYHSRFLENCSTYNSFLELEKKAFEAGSLSRKHKELMALSISI
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
VTKCEPCIEWHVQQACLTGASDKEIYETIDVALEMGGGPAAYSRFALNALDFYKKQA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA