Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226572

Identifier: 21226572

GI number: 21226572

Start: 593910

End: 594542

Strand: Reverse

Name: 21226572

Synonym: MM_0470

Alternate gene names: NA

Gene position: 594542-593910 (Counterclockwise)

Preceding gene: 21226573

Following gene: 21226570

Centisome position: 14.51

GC content: 27.01

Gene sequence:

>633_bases
ATGATTCCTTTGAAGACTTATGTTTATTGTCTTATGTTAATTGTTTTTCCCTTCGGTGGTGGTATTATTTCTAATTTAAA
ATTTGATCGAAAAGAGAGGTTATTTGATAAAAGAGAAAGGGACAATGATGGGAAAGAAAGATTATTTGAAAGAGATATTG
ATCGAAAAGAGAAGTTAGCCCAAACTTATATTACGGTTTATGGTTTGTTTATTGTTTTTGGTCAAATTGAGACTGATTCA
AAGCCTGTGATTCGTGTTGCTTTTAGTTTTTTTATTTTTATGATATCATATTGTATATTAATCTCCAATCTTAGTTATTC
GACTAATAATTCATCTACTAATAGTTTATTAATTACTACTGCCAATGTAGCTGCATTTTATTCATCTGGTTTATTTAGTT
TTTCTTTTTTAATGTTTCTTTCTCAAGATTTTTATTTACCAATTTATAGAATTATAACGGATTATCAAACAGGGGTATTC
ATTCTGATATTATGGAGTTCTAGTTTTTTGTCATTACTATTTTCTAAACATAAACCTAAAATTATTCAATTATGGTTTAT
TATTGTCTTTATTGTCTTCTTCATAGATCAGACCAGAGATATGCTAGCAGATTTACATTCTTTGATGGTTTAA

Upstream 100 bases:

>100_bases
AACATTAATAATTTTTATAAAATATATGTTTAAATCAAATTATGCTGGCATATTCTGACGCAGGCAATAAGATAATCACT
GAAATTAAAAAAATTATTAT

Downstream 100 bases:

>100_bases
TGAGAACTAATGGAAAGTACCTATCCTGTGTAAGAGTTCGGGGGGCAGCTCCCTGAGTACTCTTCTCTATGAAAAATCGA
ATATTGAGGAATGATTTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MIPLKTYVYCLMLIVFPFGGGIISNLKFDRKERLFDKRERDNDGKERLFERDIDRKEKLAQTYITVYGLFIVFGQIETDS
KPVIRVAFSFFIFMISYCILISNLSYSTNNSSTNSLLITTANVAAFYSSGLFSFSFLMFLSQDFYLPIYRIITDYQTGVF
ILILWSSSFLSLLFSKHKPKIIQLWFIIVFIVFFIDQTRDMLADLHSLMV

Sequences:

>Translated_210_residues
MIPLKTYVYCLMLIVFPFGGGIISNLKFDRKERLFDKRERDNDGKERLFERDIDRKEKLAQTYITVYGLFIVFGQIETDS
KPVIRVAFSFFIFMISYCILISNLSYSTNNSSTNSLLITTANVAAFYSSGLFSFSFLMFLSQDFYLPIYRIITDYQTGVF
ILILWSSSFLSLLFSKHKPKIIQLWFIIVFIVFFIDQTRDMLADLHSLMV
>Mature_210_residues
MIPLKTYVYCLMLIVFPFGGGIISNLKFDRKERLFDKRERDNDGKERLFERDIDRKEKLAQTYITVYGLFIVFGQIETDS
KPVIRVAFSFFIFMISYCILISNLSYSTNNSSTNSLLITTANVAAFYSSGLFSFSFLMFLSQDFYLPIYRIITDYQTGVF
ILILWSSSFLSLLFSKHKPKIIQLWFIIVFIVFFIDQTRDMLADLHSLMV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24575; Mature: 24575

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPLKTYVYCLMLIVFPFGGGIISNLKFDRKERLFDKRERDNDGKERLFERDIDRKEKLA
CCCHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHH
QTYITVYGLFIVFGQIETDSKPVIRVAFSFFIFMISYCILISNLSYSTNNSSTNSLLITT
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE
ANVAAFYSSGLFSFSFLMFLSQDFYLPIYRIITDYQTGVFILILWSSSFLSLLFSKHKPK
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCH
IIQLWFIIVFIVFFIDQTRDMLADLHSLMV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIPLKTYVYCLMLIVFPFGGGIISNLKFDRKERLFDKRERDNDGKERLFERDIDRKEKLA
CCCHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHH
QTYITVYGLFIVFGQIETDSKPVIRVAFSFFIFMISYCILISNLSYSTNNSSTNSLLITT
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE
ANVAAFYSSGLFSFSFLMFLSQDFYLPIYRIITDYQTGVFILILWSSSFLSLLFSKHKPK
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCH
IIQLWFIIVFIVFFIDQTRDMLADLHSLMV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA