Click here to switch to the map view.

The map label for this gene is yheS [C]

Identifier: 21226528

GI number: 21226528

Start: 541958

End: 543724

Strand: Reverse

Name: yheS [C]

Synonym: MM_0426

Alternate gene names: 21226528

Gene position: 543724-541958 (Counterclockwise)

Preceding gene: 21226529

Following gene: 21226527

Centisome position: 13.27

GC content: 48.78

Gene sequence:

>1767_bases
ATGAGAATAGCTATACTTAACAAAGACAGGTGCCAGCCCAGAAGGTGCAGCAAGGAGTGCGAAAAGTACTGTCCCAGAGT
CAGGACAGGAGATGAGACCATTGTTTTTGAGGCAGACGGAAAGCCGGTCATCTCCGAGGAACTCTGTGTGGGCTGTGGAA
TATGCGTCAACAAATGTCCTTTCGAAGCCATTATGATCATAGGGCTCCCTGAAGCCCTGCAGGAACCAACTCACAGGTAC
GGACCAAACGGTTTTGCCCTTTTCGGGCTTCCGGTACCCAGGACAGGAAAAGTAACCGGTATTCTGGGACCTAACGGTAT
AGGAAAAAGTACTTCGGTCCAGATCCTCTCAGGAGCCCTGGTCCCCAATTTCGGGAAGGGAAAAGGAGACTGGGACACTG
TACTCGAGCATTATGCCGGAACTGCGCTTCACGACTATTTCAAGGACGTTGTGGATGGGAGGGTAAAGGTTTCCCAGAAG
CCCCAGTATGTTGACCTCATTCCCAGAGCCTTCAAAGGAAAAACCTCTGAGCTGCTTGAGAAAACCGATGAAAGAGGCGT
TCTGGACGAGCTTATCGACCATCTTGGCCTGAGAAGTGTTATAGGAAGAAATATTACCGAATTGAGCGGTGGAGAACTGC
AGAGGGTTGCTATTGCTGCCTGTGCGGCAAGAGATGCTCAGTTCTATTTCTTTGACGAAATAAGCCCTTATCTTGATATT
TACCAGAGGATCAACGCAGCTCGCCTTATCCAGGAAATTTCAAAGGACAGGGCAGTACTTGTGGTCGAGCACGACCTTGC
ACTTCTTGATATGCTTACAGATGTAATTCACATAGCTTACGGTGAACCCGCAGGCTTTGGTGTGGTTACTCTTCCGAAAA
GTGTGCGTGTGGGGATTAACCAGTACCTTAAAGGCTACCTCCCTGAAGAAAACATAAGGATTCGCCCTGAATCCATCAAG
TTTGAGATCCATCCTCCAAGGGAAGATGCCCAGTTCAGGTCCATGATTTCCTTTAACGGTTTCTCAAAGAAGTTTGGGGA
CGGATTCTCCCTCAAAGCCACAGGAGGAAACCTGCGTGAAGGCGAGGTGCTCGGGATAGTTGGTCCTAATGGGATAGGGA
AATCAACTTTCGTAAAAGTTCTGGCGGGTGAAATAAAGCCCGACGAAGGAGACCCGGGAATCGAGGTAAAAATCTCCTAC
AAGCCCCAGTACATCAAAGCCGATATTCCTTTGAGTGTCCAGGACTTCTTAAGGGGCATTTCAAAGCAGTTCGGAAGCAG
TTATTATGAGGTTGAGATCTCAAACCCTCTCCAGCTTGAGAAAATTTACGACAGCCTGCTTACAGACCTCAGTGGTGGGG
AACTTCAGAGGGTAGCAGTTGCTGCCTGCCTTTCCCAGGAAGCAGACCTCTATATTCTTGACGAGCCGAGCGCCCACCTT
GATGTTGAGCAGCGTTCCATGGTCACCAAAGTCATCAACCGTTTTGCCGAAAACAACCAGAAAACCGCTCTGGTGGTTGA
TCACGATATTTACATGATAGATATGCTCAGCCAGCGTCTCCTTGTTTTTGAAGGAGAACCCTCAGTTTACGGTGAAGCCC
ACGGTCCTTTCAGCATGGAAGGCGGCATGAACAGGTTCCTGAAAAACCTCGGCATAACCTTCCGAAGGGATGAAGAAACA
AGGCGTCCCCGTGTAAACAACCTTGGCTCAAGGCTTGACCGGGAGCAGAAAGAAAGTGGAAACTATTATTATTCTGCTAA
GGAGTGA

Upstream 100 bases:

>100_bases
GCTTACCTGTGTAAGCCCACATTACTGAACTAATTTATGTTTTCCACATTGCTGAATTACTTACACTTATCCAATCAAAA
ACGTAATTCCGGGGACTAAT

Downstream 100 bases:

>100_bases
CCTCTTAAGAGCCAGTTTGCCAGGGAATGATCCTGCAAAAGCCTGCTGTTCCAGATTATGAAATGCTTTAAGGTTTACTC
AATGAAAACCTCAACCTTTT

Product: putative ATPase RIL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 588; Mature: 588

Protein sequence:

>588_residues
MRIAILNKDRCQPRRCSKECEKYCPRVRTGDETIVFEADGKPVISEELCVGCGICVNKCPFEAIMIIGLPEALQEPTHRY
GPNGFALFGLPVPRTGKVTGILGPNGIGKSTSVQILSGALVPNFGKGKGDWDTVLEHYAGTALHDYFKDVVDGRVKVSQK
PQYVDLIPRAFKGKTSELLEKTDERGVLDELIDHLGLRSVIGRNITELSGGELQRVAIAACAARDAQFYFFDEISPYLDI
YQRINAARLIQEISKDRAVLVVEHDLALLDMLTDVIHIAYGEPAGFGVVTLPKSVRVGINQYLKGYLPEENIRIRPESIK
FEIHPPREDAQFRSMISFNGFSKKFGDGFSLKATGGNLREGEVLGIVGPNGIGKSTFVKVLAGEIKPDEGDPGIEVKISY
KPQYIKADIPLSVQDFLRGISKQFGSSYYEVEISNPLQLEKIYDSLLTDLSGGELQRVAVAACLSQEADLYILDEPSAHL
DVEQRSMVTKVINRFAENNQKTALVVDHDIYMIDMLSQRLLVFEGEPSVYGEAHGPFSMEGGMNRFLKNLGITFRRDEET
RRPRVNNLGSRLDREQKESGNYYYSAKE

Sequences:

>Translated_588_residues
MRIAILNKDRCQPRRCSKECEKYCPRVRTGDETIVFEADGKPVISEELCVGCGICVNKCPFEAIMIIGLPEALQEPTHRY
GPNGFALFGLPVPRTGKVTGILGPNGIGKSTSVQILSGALVPNFGKGKGDWDTVLEHYAGTALHDYFKDVVDGRVKVSQK
PQYVDLIPRAFKGKTSELLEKTDERGVLDELIDHLGLRSVIGRNITELSGGELQRVAIAACAARDAQFYFFDEISPYLDI
YQRINAARLIQEISKDRAVLVVEHDLALLDMLTDVIHIAYGEPAGFGVVTLPKSVRVGINQYLKGYLPEENIRIRPESIK
FEIHPPREDAQFRSMISFNGFSKKFGDGFSLKATGGNLREGEVLGIVGPNGIGKSTFVKVLAGEIKPDEGDPGIEVKISY
KPQYIKADIPLSVQDFLRGISKQFGSSYYEVEISNPLQLEKIYDSLLTDLSGGELQRVAVAACLSQEADLYILDEPSAHL
DVEQRSMVTKVINRFAENNQKTALVVDHDIYMIDMLSQRLLVFEGEPSVYGEAHGPFSMEGGMNRFLKNLGITFRRDEET
RRPRVNNLGSRLDREQKESGNYYYSAKE
>Mature_588_residues
MRIAILNKDRCQPRRCSKECEKYCPRVRTGDETIVFEADGKPVISEELCVGCGICVNKCPFEAIMIIGLPEALQEPTHRY
GPNGFALFGLPVPRTGKVTGILGPNGIGKSTSVQILSGALVPNFGKGKGDWDTVLEHYAGTALHDYFKDVVDGRVKVSQK
PQYVDLIPRAFKGKTSELLEKTDERGVLDELIDHLGLRSVIGRNITELSGGELQRVAIAACAARDAQFYFFDEISPYLDI
YQRINAARLIQEISKDRAVLVVEHDLALLDMLTDVIHIAYGEPAGFGVVTLPKSVRVGINQYLKGYLPEENIRIRPESIK
FEIHPPREDAQFRSMISFNGFSKKFGDGFSLKATGGNLREGEVLGIVGPNGIGKSTFVKVLAGEIKPDEGDPGIEVKISY
KPQYIKADIPLSVQDFLRGISKQFGSSYYEVEISNPLQLEKIYDSLLTDLSGGELQRVAVAACLSQEADLYILDEPSAHL
DVEQRSMVTKVINRFAENNQKTALVVDHDIYMIDMLSQRLLVFEGEPSVYGEAHGPFSMEGGMNRFLKNLGITFRRDEET
RRPRVNNLGSRLDREQKESGNYYYSAKE

Specific function: Unknown

COG id: COG1245

COG function: function code R; Predicted ATPase, RNase L inhibitor (RLI) homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI108773784, Length=591, Percent_Identity=45.3468697123519, Blast_Score=521, Evalue=1e-148,
Organism=Homo sapiens, GI108773782, Length=591, Percent_Identity=45.3468697123519, Blast_Score=521, Evalue=1e-148,
Organism=Homo sapiens, GI157502201, Length=264, Percent_Identity=27.2727272727273, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI157502203, Length=265, Percent_Identity=27.9245283018868, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI148612853, Length=397, Percent_Identity=25.1889168765743, Blast_Score=74, Evalue=4e-13,
Organism=Escherichia coli, GI1789751, Length=545, Percent_Identity=23.1192660550459, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI1788165, Length=187, Percent_Identity=32.0855614973262, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI48994943, Length=500, Percent_Identity=22, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI2367384, Length=505, Percent_Identity=21.980198019802, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI1786345, Length=187, Percent_Identity=27.807486631016, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1789891, Length=240, Percent_Identity=26.25, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1787029, Length=219, Percent_Identity=29.2237442922374, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1787500, Length=203, Percent_Identity=27.5862068965517, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI48994997, Length=216, Percent_Identity=25, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI87082267, Length=186, Percent_Identity=26.3440860215054, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI87081782, Length=210, Percent_Identity=27.6190476190476, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1786563, Length=213, Percent_Identity=24.4131455399061, Blast_Score=66, Evalue=8e-12,
Organism=Escherichia coli, GI1787112, Length=195, Percent_Identity=30.2564102564103, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1787182, Length=493, Percent_Identity=21.501014198783, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI87081709, Length=194, Percent_Identity=25.2577319587629, Blast_Score=64, Evalue=4e-11,
Organism=Escherichia coli, GI1787712, Length=205, Percent_Identity=24.390243902439, Blast_Score=62, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17555800, Length=591, Percent_Identity=46.7005076142132, Blast_Score=533, Evalue=1e-152,
Organism=Caenorhabditis elegans, GI115533608, Length=318, Percent_Identity=23.8993710691824, Blast_Score=69, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI115532730, Length=225, Percent_Identity=28.8888888888889, Blast_Score=66, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6320296, Length=597, Percent_Identity=46.2311557788945, Blast_Score=524, Evalue=1e-149,
Organism=Saccharomyces cerevisiae, GI6324314, Length=195, Percent_Identity=27.6923076923077, Blast_Score=68, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6320874, Length=174, Percent_Identity=26.4367816091954, Blast_Score=64, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24661270, Length=595, Percent_Identity=44.7058823529412, Blast_Score=512, Evalue=1e-145,
Organism=Drosophila melanogaster, GI21355589, Length=595, Percent_Identity=44.7058823529412, Blast_Score=512, Evalue=1e-145,
Organism=Drosophila melanogaster, GI116007184, Length=181, Percent_Identity=26.5193370165746, Blast_Score=69, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24650853, Length=269, Percent_Identity=26.0223048327138, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24650855, Length=269, Percent_Identity=26.0223048327138, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI221500365, Length=181, Percent_Identity=26.5193370165746, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI281362751, Length=228, Percent_Identity=26.3157894736842, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24666836, Length=212, Percent_Identity=28.7735849056604, Blast_Score=66, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR013283
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR007209 [H]

Pfam domain/function: PF00005 ABC_tran; PF04068 RLI [H]

EC number: NA

Molecular weight: Translated: 65397; Mature: 65397

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: PS00198 4FE4S_FERREDOXIN ; PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIAILNKDRCQPRRCSKECEKYCPRVRTGDETIVFEADGKPVISEELCVGCGICVNKCP
CEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHCCHHHCCCC
FEAIMIIGLPEALQEPTHRYGPNGFALFGLPVPRTGKVTGILGPNGIGKSTSVQILSGAL
CEEEEEEECCHHHHCCHHHCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCEEEEEECCC
VPNFGKGKGDWDTVLEHYAGTALHDYFKDVVDGRVKVSQKPQYVDLIPRAFKGKTSELLE
CCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCEEECCCCCHHHHCCHHHCCCHHHHHH
KTDERGVLDELIDHLGLRSVIGRNITELSGGELQRVAIAACAARDAQFYFFDEISPYLDI
HCCCCCHHHHHHHHHCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHH
YQRINAARLIQEISKDRAVLVVEHDLALLDMLTDVIHIAYGEPAGFGVVTLPKSVRVGIN
HHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHH
QYLKGYLPEENIRIRPESIKFEIHPPREDAQFRSMISFNGFSKKFGDGFSLKATGGNLRE
HHHHCCCCCCCEEECCCEEEEEECCCCCCHHHHHHHHCCCCCHHCCCCEEEEECCCCCCC
GEVLGIVGPNGIGKSTFVKVLAGEIKPDEGDPGIEVKISYKPQYIKADIPLSVQDFLRGI
CCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCEEEECCCCCHHHHHHHH
SKQFGSSYYEVEISNPLQLEKIYDSLLTDLSGGELQRVAVAACLSQEADLYILDEPSAHL
HHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCC
DVEQRSMVTKVINRFAENNQKTALVVDHDIYMIDMLSQRLLVFEGEPSVYGEAHGPFSME
CHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEHHHHCCEEEEECCCCCCCCCCCCCCCC
GGMNRFLKNLGITFRRDEETRRPRVNNLGSRLDREQKESGNYYYSAKE
HHHHHHHHHCCCEEECCCHHCCCCHHHHHHHHCHHHHHCCCEEEECCC
>Mature Secondary Structure
MRIAILNKDRCQPRRCSKECEKYCPRVRTGDETIVFEADGKPVISEELCVGCGICVNKCP
CEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHCCHHHCCCC
FEAIMIIGLPEALQEPTHRYGPNGFALFGLPVPRTGKVTGILGPNGIGKSTSVQILSGAL
CEEEEEEECCHHHHCCHHHCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCEEEEEECCC
VPNFGKGKGDWDTVLEHYAGTALHDYFKDVVDGRVKVSQKPQYVDLIPRAFKGKTSELLE
CCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCEEECCCCCHHHHCCHHHCCCHHHHHH
KTDERGVLDELIDHLGLRSVIGRNITELSGGELQRVAIAACAARDAQFYFFDEISPYLDI
HCCCCCHHHHHHHHHCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHH
YQRINAARLIQEISKDRAVLVVEHDLALLDMLTDVIHIAYGEPAGFGVVTLPKSVRVGIN
HHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHH
QYLKGYLPEENIRIRPESIKFEIHPPREDAQFRSMISFNGFSKKFGDGFSLKATGGNLRE
HHHHCCCCCCCEEECCCEEEEEECCCCCCHHHHHHHHCCCCCHHCCCCEEEEECCCCCCC
GEVLGIVGPNGIGKSTFVKVLAGEIKPDEGDPGIEVKISYKPQYIKADIPLSVQDFLRGI
CCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCEEEECCCCCHHHHHHHH
SKQFGSSYYEVEISNPLQLEKIYDSLLTDLSGGELQRVAVAACLSQEADLYILDEPSAHL
HHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCC
DVEQRSMVTKVINRFAENNQKTALVVDHDIYMIDMLSQRLLVFEGEPSVYGEAHGPFSME
CHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEHHHHCCEEEEECCCCCCCCCCCCCCCC
GGMNRFLKNLGITFRRDEETRRPRVNNLGSRLDREQKESGNYYYSAKE
HHHHHHHHHCCCEEECCCHHCCCCHHHHHHHHCHHHHHCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]