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The map label for this gene is flaH [H]

Identifier: 21226516

GI number: 21226516

Start: 527388

End: 528182

Strand: Reverse

Name: flaH [H]

Synonym: MM_0414

Alternate gene names: 21226516

Gene position: 528182-527388 (Counterclockwise)

Preceding gene: 21226517

Following gene: 21226515

Centisome position: 12.89

GC content: 44.15

Gene sequence:

>795_bases
ATGGAAATAAACAAAGGGGAAGGAGCAGTATTAGGAAAAGAATTTTTTTGTGAAGAGGAACCTGGCTACCTGATAGAAGA
AGAGGAAGAGAAAGAGCTTCTGGAGTTTATATCCTCCGGAAATCTGGAAATAGACAGGAGACTGGAAGGGGGTATTCCTG
CGGGTTCACTCTGCCTCCTGGAAGGTGCAAACGACAGTGGCAAATCTATTTTTCTGCAGCAGATAATATGGGGGGCCCTT
AACCAGGATAAAACTGTGCTTTTTTTGACAACGGAAAAGACCTCAAAAGAAGTCCTTAACCAGATGGAGAGCTTAAAGCG
CGGGATTTCGGACTATTTCATAATAGGGAGGTCAAAGATATTTGAAATCAATGCAGGTTATGTTGAAGAAAACCCGCGTT
TAAGTGAGAGCCTGCTGCAGGTGCTTCTCGAATGCATACAGAGATGTGAAGAAGAACTGGTCCTTATAGATTCCCTTACA
ATTTTTGCAGTTAATGCCTCGGAAAATGCGGTGTTAAACTTCTTTACGGAATGTGTAAAACTTTGTGACAGGGGAAAAAC
CATTCTCATCAGCGTGCACGGGTACGCTTTTTCGCAGGCGGTACTCTACAGGCTGAGATCAGTTTGCAGCGCCTGTCTGG
AACTCAGGATAGAGCAGGTTGGGGACCAGTGGGTAAAAACTATGGAAATCCAGAAACTGAGGGGTGCCAGGAAAACTACG
GGAAATCTGCTTAGCTTTGATGTGGACAGCGAATTCGGGCTGAAAATAATTCCTGTTTCAAAGATTAAAGCCTGA

Upstream 100 bases:

>100_bases
AAACCTGTTCCTGTAAAGCTGGCTGTAAAGCCAGATGTGAGAAGCCAAGGGACTTTTAAGGGACCTCAGGGATTGACAGG
TCTGAGAAGGGGGGAGAGAC

Downstream 100 bases:

>100_bases
AAAAATGAAAAAAGCGTCCGGAGAGATGGTTCCCGGAAAGAAAAACCCGAATGAGGAATCTAGATGGAAGCTCTGCCTTT
TAACCCGTTGCCTGCACCGG

Product: flagellar accessory protein FlaH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MEINKGEGAVLGKEFFCEEEPGYLIEEEEEKELLEFISSGNLEIDRRLEGGIPAGSLCLLEGANDSGKSIFLQQIIWGAL
NQDKTVLFLTTEKTSKEVLNQMESLKRGISDYFIIGRSKIFEINAGYVEENPRLSESLLQVLLECIQRCEEELVLIDSLT
IFAVNASENAVLNFFTECVKLCDRGKTILISVHGYAFSQAVLYRLRSVCSACLELRIEQVGDQWVKTMEIQKLRGARKTT
GNLLSFDVDSEFGLKIIPVSKIKA

Sequences:

>Translated_264_residues
MEINKGEGAVLGKEFFCEEEPGYLIEEEEEKELLEFISSGNLEIDRRLEGGIPAGSLCLLEGANDSGKSIFLQQIIWGAL
NQDKTVLFLTTEKTSKEVLNQMESLKRGISDYFIIGRSKIFEINAGYVEENPRLSESLLQVLLECIQRCEEELVLIDSLT
IFAVNASENAVLNFFTECVKLCDRGKTILISVHGYAFSQAVLYRLRSVCSACLELRIEQVGDQWVKTMEIQKLRGARKTT
GNLLSFDVDSEFGLKIIPVSKIKA
>Mature_264_residues
MEINKGEGAVLGKEFFCEEEPGYLIEEEEEKELLEFISSGNLEIDRRLEGGIPAGSLCLLEGANDSGKSIFLQQIIWGAL
NQDKTVLFLTTEKTSKEVLNQMESLKRGISDYFIIGRSKIFEINAGYVEENPRLSESLLQVLLECIQRCEEELVLIDSLT
IFAVNASENAVLNFFTECVKLCDRGKTILISVHGYAFSQAVLYRLRSVCSACLELRIEQVGDQWVKTMEIQKLRGARKTT
GNLLSFDVDSEFGLKIIPVSKIKA

Specific function: Unknown

COG id: COG2874

COG function: function code NU; Predicted ATPases involved in biogenesis of archaeal flagella

Gene ontology:

Cell location: Archaeal flagellum (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.voltae flaH [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR014774 [H]

Pfam domain/function: PF06745 KaiC [H]

EC number: NA

Molecular weight: Translated: 29604; Mature: 29604

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEINKGEGAVLGKEFFCEEEPGYLIEEEEEKELLEFISSGNLEIDRRLEGGIPAGSLCLL
CCCCCCCCCEECHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEHHCCCCCCCCEEEE
EGANDSGKSIFLQQIIWGALNQDKTVLFLTTEKTSKEVLNQMESLKRGISDYFIIGRSKI
ECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCHHEEEECCCEE
FEINAGYVEENPRLSESLLQVLLECIQRCEEELVLIDSLTIFAVNASENAVLNFFTECVK
EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCCHHHHHHHHHHH
LCDRGKTILISVHGYAFSQAVLYRLRSVCSACLELRIEQVGDQWVKTMEIQKLRGARKTT
HHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GNLLSFDVDSEFGLKIIPVSKIKA
CCEEEEECCCCCCEEEEEHHCCCC
>Mature Secondary Structure
MEINKGEGAVLGKEFFCEEEPGYLIEEEEEKELLEFISSGNLEIDRRLEGGIPAGSLCLL
CCCCCCCCCEECHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEHHCCCCCCCCEEEE
EGANDSGKSIFLQQIIWGALNQDKTVLFLTTEKTSKEVLNQMESLKRGISDYFIIGRSKI
ECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCHHEEEECCCEE
FEINAGYVEENPRLSESLLQVLLECIQRCEEELVLIDSLTIFAVNASENAVLNFFTECVK
EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCCHHHHHHHHHHH
LCDRGKTILISVHGYAFSQAVLYRLRSVCSACLELRIEQVGDQWVKTMEIQKLRGARKTT
HHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GNLLSFDVDSEFGLKIIPVSKIKA
CCEEEEECCCCCCEEEEEHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]