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The map label for this gene is hdrC2 [H]

Identifier: 21226490

GI number: 21226490

Start: 498714

End: 499424

Strand: Direct

Name: hdrC2 [H]

Synonym: MM_0388

Alternate gene names: 21226490

Gene position: 498714-499424 (Clockwise)

Preceding gene: 21226489

Following gene: 21226491

Centisome position: 12.17

GC content: 47.82

Gene sequence:

>711_bases
ATGATTCCATATGTAAACGAATATGATACTCCGAACTGTAATACTCTTGCAGAGACAGCAAAAAAGAGTATCAGAACCCC
TGAATCTCTGGGGCTTGACCGCTGTATCCAGTGCGGAGCCTGCACAGCTTCCTGCCCTGCAGCCCGGTTTACGGATTACA
GTCCGAGGCAAATAGTAAAAAAAGTGCTGGAAAACGACCGCAGTGTACTTGAATCAGATATGATCTGGTCCTGCTTCTAC
TGCTATTCCTGCAATATGCGCTGCCCGAGGAACAACAGCCCTGTTACAATCGTGCAGGTACTGCGCCAGATGGCTATTAA
CGAGGGTATCGGAATTGGGAAGCTTGCCTATTTCCTTGAGATAGGAGAGTGCCTTGCAGAAAATGGAGCCAGCAAAGTCC
CGGGCGCCGGCGTAAAGAATATGGAAAGAGACCTTGGAGAACGCTGGATTGGGATTAAAAGAAACCTTGAGCCAATCCGT
TCCGAACTCGGGCTCAGCCCCAGGGATGTCAGGGACACGCATGGAGAGGTCCAGGCCATTCTTGAGAGCACAGGTTATTT
TGAAAGGGAAAAGTGGATTAAAGCAGGGATACAGGAAAAAAAACTTCACGGGTTCCTGAAGGCAGACTGCAGTGATGAAG
AAAAAAAGAACGGAGACTTTTGCTTTGAAAGCGATAGAGAGTATACCGGACAGGAAGCTATTACTGTTTAA

Upstream 100 bases:

>100_bases
ATTCAGGAAAGAGGATCCATTTCAAAAAAGCGTATGTTCCGAATATCAAAGGGCTTGCAGGAACTTTTACCAGCCTTGCC
CGGGAAGGAGAGATGATAAA

Downstream 100 bases:

>100_bases
AAGCTGCATGGTCGGACAGGAATATCCCGGAATAGAAACCGCCACAGCTTACGTATTTGACAGGCTTGGGGTGGATTACT
GCATAAACGATGAACAGTCC

Product: heterodisulfide reductase subunit HdrC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MIPYVNEYDTPNCNTLAETAKKSIRTPESLGLDRCIQCGACTASCPAARFTDYSPRQIVKKVLENDRSVLESDMIWSCFY
CYSCNMRCPRNNSPVTIVQVLRQMAINEGIGIGKLAYFLEIGECLAENGASKVPGAGVKNMERDLGERWIGIKRNLEPIR
SELGLSPRDVRDTHGEVQAILESTGYFEREKWIKAGIQEKKLHGFLKADCSDEEKKNGDFCFESDREYTGQEAITV

Sequences:

>Translated_236_residues
MIPYVNEYDTPNCNTLAETAKKSIRTPESLGLDRCIQCGACTASCPAARFTDYSPRQIVKKVLENDRSVLESDMIWSCFY
CYSCNMRCPRNNSPVTIVQVLRQMAINEGIGIGKLAYFLEIGECLAENGASKVPGAGVKNMERDLGERWIGIKRNLEPIR
SELGLSPRDVRDTHGEVQAILESTGYFEREKWIKAGIQEKKLHGFLKADCSDEEKKNGDFCFESDREYTGQEAITV
>Mature_236_residues
MIPYVNEYDTPNCNTLAETAKKSIRTPESLGLDRCIQCGACTASCPAARFTDYSPRQIVKKVLENDRSVLESDMIWSCFY
CYSCNMRCPRNNSPVTIVQVLRQMAINEGIGIGKLAYFLEIGECLAENGASKVPGAGVKNMERDLGERWIGIKRNLEPIR
SELGLSPRDVRDTHGEVQAILESTGYFEREKWIKAGIQEKKLHGFLKADCSDEEKKNGDFCFESDREYTGQEAITV

Specific function: Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B) [H]

COG id: COG1150

COG function: function code C; Heterodisulfide reductase, subunit C

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR017680
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: NA

EC number: =1.8.98.1 [H]

Molecular weight: Translated: 26525; Mature: 26525

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPYVNEYDTPNCNTLAETAKKSIRTPESLGLDRCIQCGACTASCPAARFTDYSPRQIVK
CCCCCCCCCCCCCHHHHHHHHHHCCCCHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
KVLENDRSVLESDMIWSCFYCYSCNMRCPRNNSPVTIVQVLRQMAINEGIGIGKLAYFLE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHH
IGECLAENGASKVPGAGVKNMERDLGERWIGIKRNLEPIRSELGLSPRDVRDTHGEVQAI
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHH
LESTGYFEREKWIKAGIQEKKLHGFLKADCSDEEKKNGDFCFESDREYTGQEAITV
HHHHCCHHHHHHHHHCCHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIPYVNEYDTPNCNTLAETAKKSIRTPESLGLDRCIQCGACTASCPAARFTDYSPRQIVK
CCCCCCCCCCCCCHHHHHHHHHHCCCCHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
KVLENDRSVLESDMIWSCFYCYSCNMRCPRNNSPVTIVQVLRQMAINEGIGIGKLAYFLE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHH
IGECLAENGASKVPGAGVKNMERDLGERWIGIKRNLEPIRSELGLSPRDVRDTHGEVQAI
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHH
LESTGYFEREKWIKAGIQEKKLHGFLKADCSDEEKKNGDFCFESDREYTGQEAITV
HHHHCCHHHHHHHHHCCHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]