| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226455
Identifier: 21226455
GI number: 21226455
Start: 460059
End: 460760
Strand: Reverse
Name: 21226455
Synonym: MM_0353
Alternate gene names: NA
Gene position: 460760-460059 (Counterclockwise)
Preceding gene: 21226457
Following gene: 21226450
Centisome position: 11.25
GC content: 33.05
Gene sequence:
>702_bases GTGTATTCTGATGATGATATTATTACATCCGTAAACACAGACGACGATATTATCACAGCTAACAATTCTACTGTATACGA CGGGAATGTTGTATCTTCAGATGATGACATAGTAATAACTGATTCGTCGCAGACTAATATCCAGTATATAGAAACAACAC AGATAAACATGGATAATAGCCAGACGGTAACTGTTGACGTTAAAAATGACAATTCAGTTGTCAACAATATATATTTTGAA TCAACAAAGGATTCAGGTAAGGCAAAAGTTGTTATCGAAGATCTGAAAGATGATACAGGCCTGGTTGAGAAACCATCAGG TGATGTCTACAAGTCATTTAATATATGGATCGACAGTGATAATGTAAATAATATTGAAAATGCAGCTGTTGATTTTAAAG TTGAAAAGACATGGCTTAAAGCAAATGGGATTGATGAATCCTCCATTGTCCTGAACATGTATGATAACGGTAAATGGGTA AAAGTGCCAATTACAATAACAGGACAGGATTCAACGTATGTGTACTTTACAGCTAAAGTATCAGAATATTCTACATTTGC AATTACTAGCAAAACAATAACTGTAAATAATACTATTACATCAACATCTTCGGATAATGATACAGAAGAAAAAAGTGGCA TAACAAGAAGTGAGATTATACATATACTTGAAATGATTCTCGCATATCTTAAGGGAAACTAA
Upstream 100 bases:
>100_bases AGTTAAAAAAGAAGACAATATCGTTGCAGATGATTCTGTTGTAATTGATACTACGGTAATATCTACAGATAACGATATTT ACAATTCTGACGATGACTAT
Downstream 100 bases:
>100_bases TTTCCATCTTAAGGGAAACTAATTTCCCTTATTTTTTAATGTGATAGCGAGCGTAAACATACAAAATTATCATGGTTTTT CTTTTACCTTTATTCTAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MYSDDDIITSVNTDDDIITANNSTVYDGNVVSSDDDIVITDSSQTNIQYIETTQINMDNSQTVTVDVKNDNSVVNNIYFE STKDSGKAKVVIEDLKDDTGLVEKPSGDVYKSFNIWIDSDNVNNIENAAVDFKVEKTWLKANGIDESSIVLNMYDNGKWV KVPITITGQDSTYVYFTAKVSEYSTFAITSKTITVNNTITSTSSDNDTEEKSGITRSEIIHILEMILAYLKGN
Sequences:
>Translated_233_residues MYSDDDIITSVNTDDDIITANNSTVYDGNVVSSDDDIVITDSSQTNIQYIETTQINMDNSQTVTVDVKNDNSVVNNIYFE STKDSGKAKVVIEDLKDDTGLVEKPSGDVYKSFNIWIDSDNVNNIENAAVDFKVEKTWLKANGIDESSIVLNMYDNGKWV KVPITITGQDSTYVYFTAKVSEYSTFAITSKTITVNNTITSTSSDNDTEEKSGITRSEIIHILEMILAYLKGN >Mature_233_residues MYSDDDIITSVNTDDDIITANNSTVYDGNVVSSDDDIVITDSSQTNIQYIETTQINMDNSQTVTVDVKNDNSVVNNIYFE STKDSGKAKVVIEDLKDDTGLVEKPSGDVYKSFNIWIDSDNVNNIENAAVDFKVEKTWLKANGIDESSIVLNMYDNGKWV KVPITITGQDSTYVYFTAKVSEYSTFAITSKTITVNNTITSTSSDNDTEEKSGITRSEIIHILEMILAYLKGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25831; Mature: 25831
Theoretical pI: Translated: 3.91; Mature: 3.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSDDDIITSVNTDDDIITANNSTVYDGNVVSSDDDIVITDSSQTNIQYIETTQINMDNS CCCCCCEEEEECCCCCEEECCCCEEECCEEECCCCCEEEECCCCCCEEEEEEEEEECCCC QTVTVDVKNDNSVVNNIYFESTKDSGKAKVVIEDLKDDTGLVEKPSGDVYKSFNIWIDSD EEEEEEECCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCEECCCCCEEEEEEEEEECC NVNNIENAAVDFKVEKTWLKANGIDESSIVLNMYDNGKWVKVPITITGQDSTYVYFTAKV CCCCCCCEEEEEEEEEEEEEECCCCCCEEEEEEECCCEEEEEEEEEECCCCEEEEEEEEE SEYSTFAITSKTITVNNTITSTSSDNDTEEKSGITRSEIIHILEMILAYLKGN CCCEEEEEEEEEEEECCEEECCCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MYSDDDIITSVNTDDDIITANNSTVYDGNVVSSDDDIVITDSSQTNIQYIETTQINMDNS CCCCCCEEEEECCCCCEEECCCCEEECCEEECCCCCEEEECCCCCCEEEEEEEEEECCCC QTVTVDVKNDNSVVNNIYFESTKDSGKAKVVIEDLKDDTGLVEKPSGDVYKSFNIWIDSD EEEEEEECCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCEECCCCCEEEEEEEEEECC NVNNIENAAVDFKVEKTWLKANGIDESSIVLNMYDNGKWVKVPITITGQDSTYVYFTAKV CCCCCCCEEEEEEEEEEEEEECCCCCCEEEEEEECCCEEEEEEEEEECCCCEEEEEEEEE SEYSTFAITSKTITVNNTITSTSSDNDTEEKSGITRSEIIHILEMILAYLKGN CCCEEEEEEEEEEEECCEEECCCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA