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The map label for this gene is yjbQ [C]

Identifier: 21226444

GI number: 21226444

Start: 449764

End: 450162

Strand: Reverse

Name: yjbQ [C]

Synonym: MM_0342

Alternate gene names: 21226444

Gene position: 450162-449764 (Counterclockwise)

Preceding gene: 21226445

Following gene: 21226440

Centisome position: 10.99

GC content: 46.12

Gene sequence:

>399_bases
TTGAATCTTAATATAGAAACTTCGAGGCGCATAGAGTTGATAGATATCACCTCAGAGGTAAAGGAAGAGGTGAGGATAAG
CGGGGTACGGGAAGGTGTATGCATTATCAGCACCAGACATACGACTGCGGGGATAATTGTCAATGAAAATGAAAACGGGC
TCCGGGAGGATATCCTGAATATGCTGGAAAGACTTGTACCTCAGGGGGCAGGATACAGGCACGACAGAATAGACAATAAC
GCTGATTCGCATCTTAAAGCCATATTGCTCGGATCAAGCGAAGCCCTGCCCATTGTAAAGGGCGAACTGGAACTCGGTAC
CTGGCAGAGCATTTTTTTTGCCGAAATGGACGGGCCAAGGAACAGGGCGGTAAATCTGACGATTTTAAAAACTGAATAA

Upstream 100 bases:

>100_bases
CTGGAAAGACAAAAAGATTTGAAGCGAAGAGATAATATTTACTCAAAAAGGTTTTCAGGTAAAGAAATACAGCAGATATT
ATCGGTTCAGAGGGAAAGAC

Downstream 100 bases:

>100_bases
AGGCAGAAAAAATTGAGTAAAAAAATTAAGGAATAAAAAATAAAAATATAAAAAATTAAGAAAGAAGAAATTAAGAAATG
TGAAAAAATCCTTAAAGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MNLNIETSRRIELIDITSEVKEEVRISGVREGVCIISTRHTTAGIIVNENENGLREDILNMLERLVPQGAGYRHDRIDNN
ADSHLKAILLGSSEALPIVKGELELGTWQSIFFAEMDGPRNRAVNLTILKTE

Sequences:

>Translated_132_residues
MNLNIETSRRIELIDITSEVKEEVRISGVREGVCIISTRHTTAGIIVNENENGLREDILNMLERLVPQGAGYRHDRIDNN
ADSHLKAILLGSSEALPIVKGELELGTWQSIFFAEMDGPRNRAVNLTILKTE
>Mature_132_residues
MNLNIETSRRIELIDITSEVKEEVRISGVREGVCIISTRHTTAGIIVNENENGLREDILNMLERLVPQGAGYRHDRIDNN
ADSHLKAILLGSSEALPIVKGELELGTWQSIFFAEMDGPRNRAVNLTILKTE

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=86, Percent_Identity=36.046511627907, Blast_Score=61, Evalue=3e-11,
Organism=Drosophila melanogaster, GI221476589, Length=101, Percent_Identity=37.6237623762376, Blast_Score=73, Evalue=5e-14,
Organism=Drosophila melanogaster, GI221476594, Length=101, Percent_Identity=37.6237623762376, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 14765; Mature: 14765

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS01314 UPF0047

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLNIETSRRIELIDITSEVKEEVRISGVREGVCIISTRHTTAGIIVNENENGLREDILN
CCCCCCCCCEEEEEECHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEECCCCCHHHHHHH
MLERLVPQGAGYRHDRIDNNADSHLKAILLGSSEALPIVKGELELGTWQSIFFAEMDGPR
HHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCCEEEEEECCCCC
NRAVNLTILKTE
CCEEEEEEEECC
>Mature Secondary Structure
MNLNIETSRRIELIDITSEVKEEVRISGVREGVCIISTRHTTAGIIVNENENGLREDILN
CCCCCCCCCEEEEEECHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEECCCCCHHHHHHH
MLERLVPQGAGYRHDRIDNNADSHLKAILLGSSEALPIVKGELELGTWQSIFFAEMDGPR
HHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCCEEEEEECCCCC
NRAVNLTILKTE
CCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]