Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226433
Identifier: 21226433
GI number: 21226433
Start: 436817
End: 437617
Strand: Reverse
Name: 21226433
Synonym: MM_0331
Alternate gene names: NA
Gene position: 437617-436817 (Counterclockwise)
Preceding gene: 21226434
Following gene: 21226432
Centisome position: 10.68
GC content: 41.07
Gene sequence:
>801_bases ATGACCGATAAAGTCCACCTCCGAGCTCCTGTTAAAATTTATGATGACGGATGGGTGGATGTAGAACTTGTAGTCACCGA CAGCAGCTTCGTTATTGGAAAACGGAACATCTCCCTGCGGGAAATAGAAGACCTGGAAGATGTTGAAATCGAGGGCGTTA ATTGTATCCAGATTAAAAAAGAAAGCAAAATTGTCCTTCAGCTTCCTAAAAACCTCCACCATCAGGTCTTCAAATACATT GCATTTAATCTCAAAGCAGATAAGTTTGCAGTGTTTTTCCTCTCGTCCGCAACTGTTGGGGGCGTTGTTTCATCGGATGC ACAATGGGAAAAAGGGTATTTCAGTGTAACAGATGAAGGTTTCTGGTTTCTATCTGCCAGAAACCAGAAAAGAATCCCTA TTGAGAATCTCGGATCTGTTAAGACTGACTTTAGAAATGTTGGCGGGAAACAGAGGAAGGTTCTTGTCCTCTCTCATGTT GAAAAAAGTAATGTAGTAACAAGCCTGGTACTTTGTCCCGAAAGCACGCTGGAAATGCTTGAAGGCTACCTTCAGCGGCT TTTCGAAAAGCATAAGCCGGCAATTAAACTGTCCGAAGATGAAATGCAGATTCTCACTCTGATATATTCCGGGCTGGATT TTGCATCAATTGAAAACATAGCTGGAATGTCAACGGATGAGTTAAACAGTTATTATGACCGCCTTGTAGATTCCGGGCTT GCTAAAGTTGTAAAAATCAGAAAAGAAATTGAACTGACTCCTCATGGGGTAAGTATGGTAGATAAAATTTCTAAAAGATA A
Upstream 100 bases:
>100_bases CTAAGTTCTTAAAGGGAGTGGGAAAACTTGAGGATGGGCTTCTCACATTAATGGACCTTAAAGAGTTATTCAGCGAGGAA GAGCTGAAGGAGATGCGGGG
Downstream 100 bases:
>100_bases TTTCAGATAATTTTGGGGGATATATATGGCAAAAGTATTGATTGTTGATGATACCGCTTTTATGAGAAAACTTCTGAAAA ACATTCTTTTCGGTGCAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MTDKVHLRAPVKIYDDGWVDVELVVTDSSFVIGKRNISLREIEDLEDVEIEGVNCIQIKKESKIVLQLPKNLHHQVFKYI AFNLKADKFAVFFLSSATVGGVVSSDAQWEKGYFSVTDEGFWFLSARNQKRIPIENLGSVKTDFRNVGGKQRKVLVLSHV EKSNVVTSLVLCPESTLEMLEGYLQRLFEKHKPAIKLSEDEMQILTLIYSGLDFASIENIAGMSTDELNSYYDRLVDSGL AKVVKIRKEIELTPHGVSMVDKISKR
Sequences:
>Translated_266_residues MTDKVHLRAPVKIYDDGWVDVELVVTDSSFVIGKRNISLREIEDLEDVEIEGVNCIQIKKESKIVLQLPKNLHHQVFKYI AFNLKADKFAVFFLSSATVGGVVSSDAQWEKGYFSVTDEGFWFLSARNQKRIPIENLGSVKTDFRNVGGKQRKVLVLSHV EKSNVVTSLVLCPESTLEMLEGYLQRLFEKHKPAIKLSEDEMQILTLIYSGLDFASIENIAGMSTDELNSYYDRLVDSGL AKVVKIRKEIELTPHGVSMVDKISKR >Mature_265_residues TDKVHLRAPVKIYDDGWVDVELVVTDSSFVIGKRNISLREIEDLEDVEIEGVNCIQIKKESKIVLQLPKNLHHQVFKYIA FNLKADKFAVFFLSSATVGGVVSSDAQWEKGYFSVTDEGFWFLSARNQKRIPIENLGSVKTDFRNVGGKQRKVLVLSHVE KSNVVTSLVLCPESTLEMLEGYLQRLFEKHKPAIKLSEDEMQILTLIYSGLDFASIENIAGMSTDELNSYYDRLVDSGLA KVVKIRKEIELTPHGVSMVDKISKR
Specific function: Unknown
COG id: COG2469
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30113; Mature: 29982
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDKVHLRAPVKIYDDGWVDVELVVTDSSFVIGKRNISLREIEDLEDVEIEGVNCIQIKK CCCCEEEECCEEEECCCCEEEEEEEECCEEEEEECCCCHHHHCCCCCCEECCCEEEEEEC ESKIVLQLPKNLHHQVFKYIAFNLKADKFAVFFLSSATVGGVVSSDAQWEKGYFSVTDEG CCEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEECCCCCCCCCEEEEECCC FWFLSARNQKRIPIENLGSVKTDFRNVGGKQRKVLVLSHVEKSNVVTSLVLCPESTLEML EEEEECCCCCCCCHHHCCCHHHHHHHCCCCCEEEEEEEECCHHCCEEEEEECCHHHHHHH EGYLQRLFEKHKPAIKLSEDEMQILTLIYSGLDFASIENIAGMSTDELNSYYDRLVDSGL HHHHHHHHHHCCCCEEECHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH AKVVKIRKEIELTPHGVSMVDKISKR HHHHHHHHHHCCCCCCHHHHHHHHCC >Mature Secondary Structure TDKVHLRAPVKIYDDGWVDVELVVTDSSFVIGKRNISLREIEDLEDVEIEGVNCIQIKK CCCEEEECCEEEECCCCEEEEEEEECCEEEEEECCCCHHHHCCCCCCEECCCEEEEEEC ESKIVLQLPKNLHHQVFKYIAFNLKADKFAVFFLSSATVGGVVSSDAQWEKGYFSVTDEG CCEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEECCCCCCCCCEEEEECCC FWFLSARNQKRIPIENLGSVKTDFRNVGGKQRKVLVLSHVEKSNVVTSLVLCPESTLEML EEEEECCCCCCCCHHHCCCHHHHHHHCCCCCEEEEEEEECCHHCCEEEEEECCHHHHHHH EGYLQRLFEKHKPAIKLSEDEMQILTLIYSGLDFASIENIAGMSTDELNSYYDRLVDSGL HHHHHHHHHHCCCCEEECHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH AKVVKIRKEIELTPHGVSMVDKISKR HHHHHHHHHHCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA