Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226413
Identifier: 21226413
GI number: 21226413
Start: 415207
End: 416157
Strand: Direct
Name: 21226413
Synonym: MM_0311
Alternate gene names: NA
Gene position: 415207-416157 (Clockwise)
Preceding gene: 21226411
Following gene: 21226414
Centisome position: 10.14
GC content: 43.43
Gene sequence:
>951_bases GTGGCAAATAGCCATGTTAACACTTTAAACCCTGGAGACCCGTTCAGGGACTGGCTTGTAGAAGAGGTTGTTGCAAATAG GATTCGGGATAAAAAATGCTGTGTAAACGTTTTTAAATACAACTCTTCCCACACTGTTTGCAGGTATCAGTTTAAAGGGG AACATTTCAGCGTAATGGCAAAGTTCTTTGCCGAACCGACAGGCAAGCTGAAAGCATACAATCCCTATAAAGGCATGATG AACGAGTACAGGAACCTGAAAAAAGCAGCTTCGATAATAAATGTTGCAAAGCCTCTTGCAGTAAGAAAAGACTTCAATTG TGTCCTTGTAACCGAACACATACCCGGAAAATCTCTTGGCTGGTACCTTAAACGCGAAGAAGACCTTTACGGAAGGCTGT CTGCTGTGGCTCACATGCTCAGGAATCTACATGACAATACAAAGTCTTCTTACAATAAAGAAAATGAGTTCAGAAACTTT CATGATGTTCTGGACCACCTTAAACTTGATTACGGCACGAGAGAGACTTTCAATAAACTTCTGGGAGAATGGTGGTACAG TTCATTGCTCGACCGGGATCATGGCTGTATGGTCCACAGGGACGTTACTCCTTCAAATTATATTTTTTGCAAAGAAAAGC CCTATGCCATCGATTTTGAGAGCTCATGGTTTGAGGCACATCCCATAAGAGACCTCGGGGTCCTTACTGCAGAACTTAAG AATGAATTTGAATTGCACAAAGGGGGAGGCTGGAAAGCCGAGCCCTATATAGGAAACTTCCTCTGGGAGTACAGCCGCGG GGAAAAGGACTTTTACAGCATTACCGGAATTTTGCCTTTTTTCATGAGTATAGGGCTGCTCCGTTCCGCAAGGCTTCACC AGGGAGATTACAGGAATTACCTGATAAATGAAGCGCGTGAATGTCTGGGTGCAATTTATAGAGGGAATTAA
Upstream 100 bases:
>100_bases GCATAGACTTTAAGCTGGGAGATATAGCCGCTTAAGTTAGAGATGACTATGAAGCAAAAGACTGTCGATATTGTTTCTGG AAAAATGGGGGTAAGTTGAA
Downstream 100 bases:
>100_bases GTAAAATAGGAAAGCTTTAAGATAGTAAACGAGATAGGAGACTGAAAGTAAAATCAAAGATATTGAAAACATCACAAGGG GGACATGGGAGGCAAGAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MANSHVNTLNPGDPFRDWLVEEVVANRIRDKKCCVNVFKYNSSHTVCRYQFKGEHFSVMAKFFAEPTGKLKAYNPYKGMM NEYRNLKKAASIINVAKPLAVRKDFNCVLVTEHIPGKSLGWYLKREEDLYGRLSAVAHMLRNLHDNTKSSYNKENEFRNF HDVLDHLKLDYGTRETFNKLLGEWWYSSLLDRDHGCMVHRDVTPSNYIFCKEKPYAIDFESSWFEAHPIRDLGVLTAELK NEFELHKGGGWKAEPYIGNFLWEYSRGEKDFYSITGILPFFMSIGLLRSARLHQGDYRNYLINEARECLGAIYRGN
Sequences:
>Translated_316_residues MANSHVNTLNPGDPFRDWLVEEVVANRIRDKKCCVNVFKYNSSHTVCRYQFKGEHFSVMAKFFAEPTGKLKAYNPYKGMM NEYRNLKKAASIINVAKPLAVRKDFNCVLVTEHIPGKSLGWYLKREEDLYGRLSAVAHMLRNLHDNTKSSYNKENEFRNF HDVLDHLKLDYGTRETFNKLLGEWWYSSLLDRDHGCMVHRDVTPSNYIFCKEKPYAIDFESSWFEAHPIRDLGVLTAELK NEFELHKGGGWKAEPYIGNFLWEYSRGEKDFYSITGILPFFMSIGLLRSARLHQGDYRNYLINEARECLGAIYRGN >Mature_315_residues ANSHVNTLNPGDPFRDWLVEEVVANRIRDKKCCVNVFKYNSSHTVCRYQFKGEHFSVMAKFFAEPTGKLKAYNPYKGMMN EYRNLKKAASIINVAKPLAVRKDFNCVLVTEHIPGKSLGWYLKREEDLYGRLSAVAHMLRNLHDNTKSSYNKENEFRNFH DVLDHLKLDYGTRETFNKLLGEWWYSSLLDRDHGCMVHRDVTPSNYIFCKEKPYAIDFESSWFEAHPIRDLGVLTAELKN EFELHKGGGWKAEPYIGNFLWEYSRGEKDFYSITGILPFFMSIGLLRSARLHQGDYRNYLINEARECLGAIYRGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36898; Mature: 36767
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: PS00109 PROTEIN_KINASE_TYR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANSHVNTLNPGDPFRDWLVEEVVANRIRDKKCCVNVFKYNSSHTVCRYQFKGEHFSVMA CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHEECCCCCEEEEEECCCHHHHHH KFFAEPTGKLKAYNPYKGMMNEYRNLKKAASIINVAKPLAVRKDFNCVLVTEHIPGKSLG HHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC WYLKREEDLYGRLSAVAHMLRNLHDNTKSSYNKENEFRNFHDVLDHLKLDYGTRETFNKL HHEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH LGEWWYSSLLDRDHGCMVHRDVTPSNYIFCKEKPYAIDFESSWFEAHPIRDLGVLTAELK HHHHHHHHHHCCCCCEEEEECCCCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHH NEFELHKGGGWKAEPYIGNFLWEYSRGEKDFYSITGILPFFMSIGLLRSARLHQGDYRNY HHHEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LINEARECLGAIYRGN HHHHHHHHHHHHHCCC >Mature Secondary Structure ANSHVNTLNPGDPFRDWLVEEVVANRIRDKKCCVNVFKYNSSHTVCRYQFKGEHFSVMA CCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHEECCCCCEEEEEECCCHHHHHH KFFAEPTGKLKAYNPYKGMMNEYRNLKKAASIINVAKPLAVRKDFNCVLVTEHIPGKSLG HHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC WYLKREEDLYGRLSAVAHMLRNLHDNTKSSYNKENEFRNFHDVLDHLKLDYGTRETFNKL HHEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH LGEWWYSSLLDRDHGCMVHRDVTPSNYIFCKEKPYAIDFESSWFEAHPIRDLGVLTAELK HHHHHHHHHHCCCCCEEEEECCCCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHH NEFELHKGGGWKAEPYIGNFLWEYSRGEKDFYSITGILPFFMSIGLLRSARLHQGDYRNY HHHEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LINEARECLGAIYRGN HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA