Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226407

Identifier: 21226407

GI number: 21226407

Start: 408712

End: 408972

Strand: Direct

Name: 21226407

Synonym: MM_0305

Alternate gene names: NA

Gene position: 408712-408972 (Clockwise)

Preceding gene: 21226406

Following gene: 21226409

Centisome position: 9.98

GC content: 41.76

Gene sequence:

>261_bases
ATGAGTGAAATACGTGAAGTCGACCGTTTTGAGTGCAGTGTTATAAGTGTGATCAAGAATCTGGCCTGGAAAGGTGTGAC
AGTTGAAGAAAAAGGCACACAAGGAAGGGTGTACTTCGGAAGGGTTAACGGGGATATTGAAATAAACCCTGGAGACACAT
TTTATCTTGGAATCAGGCCGATTTATGAAATAGAAGATAAGACCATGAGAGTTACACTCTACAACTCTGAAGACAAACCG
CTTGACTGGACACTTGTTTGA

Upstream 100 bases:

>100_bases
TCTGGGATAGTTTTATGTATGGAGATCATTATTTTCTATCAGAAACCATATTTCAGTAAAGTCTTAACGATATCCGAAAC
AAGATTTAAAAGGGATTCCC

Downstream 100 bases:

>100_bases
ACAGGTGATGGTAAAGCCGGGAAGTAATCCGGATAAAATAAAGATTCTTTCTACAGGTTTGTTTCCTGAAGAGAGATTTA
ATCTACTTTTTAAACCTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 86; Mature: 85

Protein sequence:

>86_residues
MSEIREVDRFECSVISVIKNLAWKGVTVEEKGTQGRVYFGRVNGDIEINPGDTFYLGIRPIYEIEDKTMRVTLYNSEDKP
LDWTLV

Sequences:

>Translated_86_residues
MSEIREVDRFECSVISVIKNLAWKGVTVEEKGTQGRVYFGRVNGDIEINPGDTFYLGIRPIYEIEDKTMRVTLYNSEDKP
LDWTLV
>Mature_85_residues
SEIREVDRFECSVISVIKNLAWKGVTVEEKGTQGRVYFGRVNGDIEINPGDTFYLGIRPIYEIEDKTMRVTLYNSEDKPL
DWTLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9945; Mature: 9814

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEIREVDRFECSVISVIKNLAWKGVTVEEKGTQGRVYFGRVNGDIEINPGDTFYLGIRP
CCCHHHHHHCCHHHHHHHHHHCCCCCEEECCCCCCCEEEEEECCEEEECCCCEEEECCCE
IYEIEDKTMRVTLYNSEDKPLDWTLV
EEEECCCEEEEEEECCCCCCEEEEEC
>Mature Secondary Structure 
SEIREVDRFECSVISVIKNLAWKGVTVEEKGTQGRVYFGRVNGDIEINPGDTFYLGIRP
CCHHHHHHCCHHHHHHHHHHCCCCCEEECCCCCCCEEEEEECCEEEECCCCEEEECCCE
IYEIEDKTMRVTLYNSEDKPLDWTLV
EEEECCCEEEEEEECCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA