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The map label for this gene is opuCC [H]

Identifier: 21226400

GI number: 21226400

Start: 398232

End: 399152

Strand: Reverse

Name: opuCC [H]

Synonym: MM_0298

Alternate gene names: 21226400

Gene position: 399152-398232 (Counterclockwise)

Preceding gene: 21226405

Following gene: 21226399

Centisome position: 9.74

GC content: 46.04

Gene sequence:

>921_bases
ATGAAATTTCGCTTTATTATAGTCCTGCTGCTTGCAGCCTCTCTTTTTTTCAGCGGCTGCGCGGAAAATAATCAAAATAG
AGAGAATAATACGCAGCCTGCAGAAAAAGTTGTGATAGGAACAAAACTTTTCCAGGAATCCTATATTACTGCTCATATGG
TTTCGCTTTTGCTCGAAGAGCAGGGGTATGATACTGAGGTCAAAGAGAACCTCGGAGGCACGCTTGTAAACTACGAGGCT
TTGAAAAAAGGAGACATCCAGTCCTATATTGAATATACAGGGACAATTTACAGCCAGATCCTGAAAAAACCGCCTCTTGA
GGAGTGGGACCCTGAAGTGGTATATGAAGAGTCAGAAAAGGGCATGCTTGAAAGCGATGGAGTAGTAATCGCATCAAGCC
TGGGATTTGAAGATGCCTACGCTATAGCTGTTGACAGGGAATGGGCTGAAAACCAGGGAATAAACACGATAAGTGACCTT
GAGCCCTATGCTTCGGAAATGTCGGTGGGCACTGACCCGGAGTTTGCCACAAGAGAAGACGGGCTTCCGCAGCTTGCCCG
CGTTTACGGATTTTCATTCAAAAACTACAATTCAATGGCTCCGGGCATAATGTACGAAGCTATGGAGAACAATGAGGTTG
ATGCTATAAGCGCTTATACCACGGATACCCGAAACGACCTCTACGGCCTGAAAGTGCTTGAAGACGATAAGCACGCTCTT
CCTCCTTACGATGCCGTTGTTCTTGTTACCGAGTCCTTTGCAGAGGATAATCCAGAAGCCATGGAGGCACTTTCACAGCT
TAACGGCAGGATTGACCAGGACACCATGAGGCGCCTTAATGGAGAATATGACATTGAAGGCAGGTCTGCAAAAGATATTG
CCAGGGATTACCTGATAGAAGAAGGCCTGATATCTTCCTGA

Upstream 100 bases:

>100_bases
GCTATAACTACCATCGACAGTAAATCTACAAATAAATCCGCTGATTTATTTAAAGGAAAATAGATACTGACCGGGAGTCG
GATACTGAGGGGGGAATCAA

Downstream 100 bases:

>100_bases
ACACCGCATGTTAAGGCTCTGCCCATGTCATTCACAAAACTTTTTGACCGGATAGATTCAGTCCGACTTGAGAATATTAC
AAAAAAATACGGGGAGCATT

Product: glycine betaine-binding protein

Products: NA

Alternate protein names: Osmoprotectant-binding protein [H]

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MKFRFIIVLLLAASLFFSGCAENNQNRENNTQPAEKVVIGTKLFQESYITAHMVSLLLEEQGYDTEVKENLGGTLVNYEA
LKKGDIQSYIEYTGTIYSQILKKPPLEEWDPEVVYEESEKGMLESDGVVIASSLGFEDAYAIAVDREWAENQGINTISDL
EPYASEMSVGTDPEFATREDGLPQLARVYGFSFKNYNSMAPGIMYEAMENNEVDAISAYTTDTRNDLYGLKVLEDDKHAL
PPYDAVVLVTESFAEDNPEAMEALSQLNGRIDQDTMRRLNGEYDIEGRSAKDIARDYLIEEGLISS

Sequences:

>Translated_306_residues
MKFRFIIVLLLAASLFFSGCAENNQNRENNTQPAEKVVIGTKLFQESYITAHMVSLLLEEQGYDTEVKENLGGTLVNYEA
LKKGDIQSYIEYTGTIYSQILKKPPLEEWDPEVVYEESEKGMLESDGVVIASSLGFEDAYAIAVDREWAENQGINTISDL
EPYASEMSVGTDPEFATREDGLPQLARVYGFSFKNYNSMAPGIMYEAMENNEVDAISAYTTDTRNDLYGLKVLEDDKHAL
PPYDAVVLVTESFAEDNPEAMEALSQLNGRIDQDTMRRLNGEYDIEGRSAKDIARDYLIEEGLISS
>Mature_306_residues
MKFRFIIVLLLAASLFFSGCAENNQNRENNTQPAEKVVIGTKLFQESYITAHMVSLLLEEQGYDTEVKENLGGTLVNYEA
LKKGDIQSYIEYTGTIYSQILKKPPLEEWDPEVVYEESEKGMLESDGVVIASSLGFEDAYAIAVDREWAENQGINTISDL
EPYASEMSVGTDPEFATREDGLPQLARVYGFSFKNYNSMAPGIMYEAMENNEVDAISAYTTDTRNDLYGLKVLEDDKHAL
PPYDAVVLVTESFAEDNPEAMEALSQLNGRIDQDTMRRLNGEYDIEGRSAKDIARDYLIEEGLISS

Specific function: Member of a high affinity multicomponent binding- protein-dependent transport system for glycine betaine, carnitine, and choline [H]

COG id: COG1732

COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788452, Length=282, Percent_Identity=28.7234042553192, Blast_Score=101, Evalue=8e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 34299; Mature: 34299

Theoretical pI: Translated: 3.96; Mature: 3.96

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFRFIIVLLLAASLFFSGCAENNQNRENNTQPAEKVVIGTKLFQESYITAHMVSLLLEE
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGYDTEVKENLGGTLVNYEALKKGDIQSYIEYTGTIYSQILKKPPLEEWDPEVVYEESEK
CCCCCHHHHHCCCCEEEHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCC
GMLESDGVVIASSLGFEDAYAIAVDREWAENQGINTISDLEPYASEMSVGTDPEFATRED
CCCCCCCEEEEECCCCCCEEEEEEECHHHHCCCCCCHHHCCHHHHHCCCCCCCCCCCCCC
GLPQLARVYGFSFKNYNSMAPGIMYEAMENNEVDAISAYTTDTRNDLYGLKVLEDDKHAL
CHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCEEEEEEEECCCCCC
PPYDAVVLVTESFAEDNPEAMEALSQLNGRIDQDTMRRLNGEYDIEGRSAKDIARDYLIE
CCCCEEEEEEHHHCCCCHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHH
EGLISS
CCCCCC
>Mature Secondary Structure
MKFRFIIVLLLAASLFFSGCAENNQNRENNTQPAEKVVIGTKLFQESYITAHMVSLLLEE
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGYDTEVKENLGGTLVNYEALKKGDIQSYIEYTGTIYSQILKKPPLEEWDPEVVYEESEK
CCCCCHHHHHCCCCEEEHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCC
GMLESDGVVIASSLGFEDAYAIAVDREWAENQGINTISDLEPYASEMSVGTDPEFATRED
CCCCCCCEEEEECCCCCCEEEEEEECHHHHCCCCCCHHHCCHHHHHCCCCCCCCCCCCCC
GLPQLARVYGFSFKNYNSMAPGIMYEAMENNEVDAISAYTTDTRNDLYGLKVLEDDKHAL
CHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCEEEEEEEECCCCCC
PPYDAVVLVTESFAEDNPEAMEALSQLNGRIDQDTMRRLNGEYDIEGRSAKDIARDYLIE
CCCCEEEEEEHHHCCCCHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHH
EGLISS
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10216873; 9384377 [H]