Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226374
Identifier: 21226374
GI number: 21226374
Start: 361956
End: 362621
Strand: Direct
Name: 21226374
Synonym: MM_0272
Alternate gene names: NA
Gene position: 361956-362621 (Clockwise)
Preceding gene: 21226371
Following gene: 21226381
Centisome position: 8.84
GC content: 43.69
Gene sequence:
>666_bases ATGTCAATTTTATCTGAGATCTTCGGAGAATGCCCCCAGGCAAAAATAATCGAGGTGTTTGCAGAGCACCACGAAGACAA ACTCTATGTTGCCGATATTGTCCGAATGACCAGTGTTTCAAAATCAACCGTTTACAAGCACCTGAGAAAATTAATTGCAG AAGAGGTCATTGAGGAGAAAGGGAGCGCAGGCAATATCAAGTTTTATCAGTTAAATCTCAGCAGCCCGAAAGCAAAAATT ATCCTATCAGTGGAGAAGTTCATCGCCTCAGAAAGGCCAGGAACTCTGGTTGCTGTGGGATCAGGAGAAAAAACTGGACA AAACTTAAAGGGAAATGCTTATGGAGATGAAAAAACCCGGCAACTGGCCGCTAAGGAGAGCAAAGGGGCCCGCGAAGAAA CTTCGGCTGTTGAAGAAGAAACGGAGTATATCGATTTTTACGGCATCGAAGCGGCCTCGACAGCAGACGGTGAGACCTAT CTAATTGGGAATTTTGAAAGCTTTGAAGATGCCAAAGACTTTCTTAAATCTGAGTTGAACCACTTTGAAACCGTTAATAC AAGGATAATCAGGCACACTGAAAGGACGAGTGAGGAAGCAATATTCACAGACCGCGTAGAAGATTTCTTTTATCACAAAC CGCCCTCCTGGGATTCGCAAATATGA
Upstream 100 bases:
>100_bases GGAAGTATTCTCAACTTTTCAGCAATCAGAAAGCTAAAAAACAATAAAAGCGTCTAATTATTATACGTTAGAGGATAGAT TCTATACTATAGGCGAAATC
Downstream 100 bases:
>100_bases AATGTGGATGCCTATGAAGATATTTCTGCGTTGTCTGGGATTTATTAAAGAAATGGACTATGGTTGTTATAAGTTATTAC CTATCGTCATGCATAAGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MSILSEIFGECPQAKIIEVFAEHHEDKLYVADIVRMTSVSKSTVYKHLRKLIAEEVIEEKGSAGNIKFYQLNLSSPKAKI ILSVEKFIASERPGTLVAVGSGEKTGQNLKGNAYGDEKTRQLAAKESKGAREETSAVEEETEYIDFYGIEAASTADGETY LIGNFESFEDAKDFLKSELNHFETVNTRIIRHTERTSEEAIFTDRVEDFFYHKPPSWDSQI
Sequences:
>Translated_221_residues MSILSEIFGECPQAKIIEVFAEHHEDKLYVADIVRMTSVSKSTVYKHLRKLIAEEVIEEKGSAGNIKFYQLNLSSPKAKI ILSVEKFIASERPGTLVAVGSGEKTGQNLKGNAYGDEKTRQLAAKESKGAREETSAVEEETEYIDFYGIEAASTADGETY LIGNFESFEDAKDFLKSELNHFETVNTRIIRHTERTSEEAIFTDRVEDFFYHKPPSWDSQI >Mature_220_residues SILSEIFGECPQAKIIEVFAEHHEDKLYVADIVRMTSVSKSTVYKHLRKLIAEEVIEEKGSAGNIKFYQLNLSSPKAKII LSVEKFIASERPGTLVAVGSGEKTGQNLKGNAYGDEKTRQLAAKESKGAREETSAVEEETEYIDFYGIEAASTADGETYL IGNFESFEDAKDFLKSELNHFETVNTRIIRHTERTSEEAIFTDRVEDFFYHKPPSWDSQI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24915; Mature: 24784
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSILSEIFGECPQAKIIEVFAEHHEDKLYVADIVRMTSVSKSTVYKHLRKLIAEEVIEEK CCHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHC GSAGNIKFYQLNLSSPKAKIILSVEKFIASERPGTLVAVGSGEKTGQNLKGNAYGDEKTR CCCCCEEEEEEECCCCCEEEEEHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHH QLAAKESKGAREETSAVEEETEYIDFYGIEAASTADGETYLIGNFESFEDAKDFLKSELN HHHHHHHCCCHHHHHHHHHHHHEEEEECCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHH HFETVNTRIIRHTERTSEEAIFTDRVEDFFYHKPPSWDSQI HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SILSEIFGECPQAKIIEVFAEHHEDKLYVADIVRMTSVSKSTVYKHLRKLIAEEVIEEK CHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHC GSAGNIKFYQLNLSSPKAKIILSVEKFIASERPGTLVAVGSGEKTGQNLKGNAYGDEKTR CCCCCEEEEEEECCCCCEEEEEHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHH QLAAKESKGAREETSAVEEETEYIDFYGIEAASTADGETYLIGNFESFEDAKDFLKSELN HHHHHHHCCCHHHHHHHHHHHHEEEEECCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHH HFETVNTRIIRHTERTSEEAIFTDRVEDFFYHKPPSWDSQI HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA