Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226354
Identifier: 21226354
GI number: 21226354
Start: 335338
End: 335565
Strand: Reverse
Name: 21226354
Synonym: MM_0252
Alternate gene names: NA
Gene position: 335565-335338 (Counterclockwise)
Preceding gene: 21226355
Following gene: 21226353
Centisome position: 8.19
GC content: 34.65
Gene sequence:
>228_bases TTGAAGAGAAGAAGCAGGACAGATATTGCAGTAGATATTTTAAGAGTGGCGATGAACGGGGCAAAGAAAACACATATTGT TTATGAAGTAAATCTGAACTTTAACATTGCTCAGAAGTATCTGGAAATGTTGAAAGAAAAAGAGCTTATCAGGCATGAAA ACGGTGTTTTTATAACGACTGATAAGGGAAAAGTTTTCCAGGAAATGGCTAAAGAACTTAAGCTATAA
Upstream 100 bases:
>100_bases TAGAATCTTTGTTACCTACAAAAAGATACGCTTTAATATATTTTGAAAGCGTTAATCCTTACAAAGATCACTTCAAATCA CAGTGGGGGAGGAGTTAGTA
Downstream 100 bases:
>100_bases GCATATTTTTTTCTTTAACTTAACTTTTTTTATTCTTTTTTAATTTTAATTCTTTTTTTGACCAGGTTATCGGCTCAATT TTTCTACTTTTTTCCTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 75; Mature: 75
Protein sequence:
>75_residues MKRRSRTDIAVDILRVAMNGAKKTHIVYEVNLNFNIAQKYLEMLKEKELIRHENGVFITTDKGKVFQEMAKELKL
Sequences:
>Translated_75_residues MKRRSRTDIAVDILRVAMNGAKKTHIVYEVNLNFNIAQKYLEMLKEKELIRHENGVFITTDKGKVFQEMAKELKL >Mature_75_residues MKRRSRTDIAVDILRVAMNGAKKTHIVYEVNLNFNIAQKYLEMLKEKELIRHENGVFITTDKGKVFQEMAKELKL
Specific function: Unknown
COG id: COG3432
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8808; Mature: 8808
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRRSRTDIAVDILRVAMNGAKKTHIVYEVNLNFNIAQKYLEMLKEKELIRHENGVFITT CCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEE DKGKVFQEMAKELKL CCCHHHHHHHHHHCC >Mature Secondary Structure MKRRSRTDIAVDILRVAMNGAKKTHIVYEVNLNFNIAQKYLEMLKEKELIRHENGVFITT CCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEE DKGKVFQEMAKELKL CCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA