| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226337
Identifier: 21226337
GI number: 21226337
Start: 317354
End: 318631
Strand: Reverse
Name: 21226337
Synonym: MM_0235
Alternate gene names: NA
Gene position: 318631-317354 (Counterclockwise)
Preceding gene: 21226339
Following gene: 21226336
Centisome position: 7.78
GC content: 45.54
Gene sequence:
>1278_bases TTGAAATGGATTAAAAAGCTCTTCGGAAAGCAGGAAAGCTCACACGAGAAGAATGCTTCTATCGAGATCGGTTTTGATGA ACTGCCTGCATGGCTTGAGGAAAGCTCTCAAAAAATATCTTCAGAAATAAAGGGGGATGTCTCAGGGCTTTTTAAAGAGC TTGAGGCTGCGATTTCCGAGCTCAGGGAAAGCAATGACAATCTTCTGGAGGCAAAAGTTGAGGGAAATTTCGACATAAGA GCTGTTAAGCGGGCGAAGAGTAACCGTGAAAACGTAACAAAACAGGTAGGAGTATTTATAGATAAGCTTGGGATTCCGGA AAACACGGATTTTAAATCCCTTAAAGCGTTTCATGAATCAGCCATGCAGAGCCTGAACACCTGCCTTGAACATATGAACA GGAGCTTCCGGTATACCAGGCCTGTCTTTCCTCAGGAGTCAAAGGACGTTACTGACAGCCTCGGCAGGCTTGGCAAGGTC CTTAATGAGCTCAGGGAAACAATCCAGGGTCACAGGCGTGAAATGGAATCTATTGAAGAAGCTTCTAAAGGCATAAAAGA GGTCAGAGAAACCTGTTCTTTAATAAAAGCTGAAGAGGGCGAACTCGAAGCTAAAAACCGGAAACTCCAGGCTCTGAAAG ATGAAATAGCCAGCAACAGTCGGGCTCTCGAAGAGCTTAAACAGGGAAAAGCCTGGCAAAAACTGCAAAGACTTCAGGAA GAGTCAACTCTTGCCGAAGGCAGGCTCAAAAAAGCCGAAGCAGGCCTGAACTCCCTGATTCTGCCTTTTTCAGGTAACCT CTCAAGAATAAAGAAACTCCATGAAAGCGGCAAATATACACTGAAGCCTGAGGTAAAGAAACAGCTCGATATCTGCCTTG AAAACCCTGTAAACCTTGAACCTTCCTTTTTCCCGGAGCTCCAGAAAGTTTTCGAGGACCATGCTCTTGATATACAGGCT CAGAAAAAAGAGAAAGCTCTGGCACAGGTCAGGTCCGCAGCCTCGGGTTTTGAAGAGAAGAAAAAAGAGTATATTGAAGC CCGGAAGGCGTTTGACTCCAGAAAATCAGAACTTGCAAGCTCGGATACCGGAGAACTTGCCTCGCTCGAACATAAGGAAG CAGAACTTCTTTCGAGAACCCTCCTGCTTGAAGAAGAGACCGAAAGTTCCGAAAAGAAACTGGCTGCCTTAAGAGACGAT CTCAAAACCAGAGAAGAAAAACTTCAGGCCAGTGTTGCTGCAATTGATAGCGGCGTCAAGATAGGATTCCCATCCTGA
Upstream 100 bases:
>100_bases TTCAGGTATTAAATCTTACTGAATCACAAATATTATAAAGTTTTCTGCCTTTAAATTTATTAACCTGTATCTATCTTATC AAATTCCGGGAAGGCCTATA
Downstream 100 bases:
>100_bases CTTAATTCTGGTTTTTTCTCTTTTCCGGGAAGGCCGCCTCCGGTGTCGAGCGCGCAGGAATGGTTCATTATCGCGTATAA GGTCACACCGGTCAGAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MKWIKKLFGKQESSHEKNASIEIGFDELPAWLEESSQKISSEIKGDVSGLFKELEAAISELRESNDNLLEAKVEGNFDIR AVKRAKSNRENVTKQVGVFIDKLGIPENTDFKSLKAFHESAMQSLNTCLEHMNRSFRYTRPVFPQESKDVTDSLGRLGKV LNELRETIQGHRREMESIEEASKGIKEVRETCSLIKAEEGELEAKNRKLQALKDEIASNSRALEELKQGKAWQKLQRLQE ESTLAEGRLKKAEAGLNSLILPFSGNLSRIKKLHESGKYTLKPEVKKQLDICLENPVNLEPSFFPELQKVFEDHALDIQA QKKEKALAQVRSAASGFEEKKKEYIEARKAFDSRKSELASSDTGELASLEHKEAELLSRTLLLEEETESSEKKLAALRDD LKTREEKLQASVAAIDSGVKIGFPS
Sequences:
>Translated_425_residues MKWIKKLFGKQESSHEKNASIEIGFDELPAWLEESSQKISSEIKGDVSGLFKELEAAISELRESNDNLLEAKVEGNFDIR AVKRAKSNRENVTKQVGVFIDKLGIPENTDFKSLKAFHESAMQSLNTCLEHMNRSFRYTRPVFPQESKDVTDSLGRLGKV LNELRETIQGHRREMESIEEASKGIKEVRETCSLIKAEEGELEAKNRKLQALKDEIASNSRALEELKQGKAWQKLQRLQE ESTLAEGRLKKAEAGLNSLILPFSGNLSRIKKLHESGKYTLKPEVKKQLDICLENPVNLEPSFFPELQKVFEDHALDIQA QKKEKALAQVRSAASGFEEKKKEYIEARKAFDSRKSELASSDTGELASLEHKEAELLSRTLLLEEETESSEKKLAALRDD LKTREEKLQASVAAIDSGVKIGFPS >Mature_425_residues MKWIKKLFGKQESSHEKNASIEIGFDELPAWLEESSQKISSEIKGDVSGLFKELEAAISELRESNDNLLEAKVEGNFDIR AVKRAKSNRENVTKQVGVFIDKLGIPENTDFKSLKAFHESAMQSLNTCLEHMNRSFRYTRPVFPQESKDVTDSLGRLGKV LNELRETIQGHRREMESIEEASKGIKEVRETCSLIKAEEGELEAKNRKLQALKDEIASNSRALEELKQGKAWQKLQRLQE ESTLAEGRLKKAEAGLNSLILPFSGNLSRIKKLHESGKYTLKPEVKKQLDICLENPVNLEPSFFPELQKVFEDHALDIQA QKKEKALAQVRSAASGFEEKKKEYIEARKAFDSRKSELASSDTGELASLEHKEAELLSRTLLLEEETESSEKKLAALRDD LKTREEKLQASVAAIDSGVKIGFPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47958; Mature: 47958
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWIKKLFGKQESSHEKNASIEIGFDELPAWLEESSQKISSEIKGDVSGLFKELEAAISE CCHHHHHHCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRESNDNLLEAKVEGNFDIRAVKRAKSNRENVTKQVGVFIDKLGIPENTDFKSLKAFHES HHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH AMQSLNTCLEHMNRSFRYTRPVFPQESKDVTDSLGRLGKVLNELRETIQGHRREMESIEE HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASKGIKEVRETCSLIKAEEGELEAKNRKLQALKDEIASNSRALEELKQGKAWQKLQRLQE HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHH ESTLAEGRLKKAEAGLNSLILPFSGNLSRIKKLHESGKYTLKPEVKKQLDICLENPVNLE HHHHHHHHHHHHHCCHHCEECCCCCCHHHHHHHHHCCCEEECHHHHHHHHHHHCCCCCCC PSFFPELQKVFEDHALDIQAQKKEKALAQVRSAASGFEEKKKEYIEARKAFDSRKSELAS CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC SDTGELASLEHKEAELLSRTLLLEEETESSEKKLAALRDDLKTREEKLQASVAAIDSGVK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC IGFPS CCCCC >Mature Secondary Structure MKWIKKLFGKQESSHEKNASIEIGFDELPAWLEESSQKISSEIKGDVSGLFKELEAAISE CCHHHHHHCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRESNDNLLEAKVEGNFDIRAVKRAKSNRENVTKQVGVFIDKLGIPENTDFKSLKAFHES HHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH AMQSLNTCLEHMNRSFRYTRPVFPQESKDVTDSLGRLGKVLNELRETIQGHRREMESIEE HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASKGIKEVRETCSLIKAEEGELEAKNRKLQALKDEIASNSRALEELKQGKAWQKLQRLQE HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHH ESTLAEGRLKKAEAGLNSLILPFSGNLSRIKKLHESGKYTLKPEVKKQLDICLENPVNLE HHHHHHHHHHHHHCCHHCEECCCCCCHHHHHHHHHCCCEEECHHHHHHHHHHHCCCCCCC PSFFPELQKVFEDHALDIQAQKKEKALAQVRSAASGFEEKKKEYIEARKAFDSRKSELAS CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC SDTGELASLEHKEAELLSRTLLLEEETESSEKKLAALRDDLKTREEKLQASVAAIDSGVK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC IGFPS CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA