Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226337

Identifier: 21226337

GI number: 21226337

Start: 317354

End: 318631

Strand: Reverse

Name: 21226337

Synonym: MM_0235

Alternate gene names: NA

Gene position: 318631-317354 (Counterclockwise)

Preceding gene: 21226339

Following gene: 21226336

Centisome position: 7.78

GC content: 45.54

Gene sequence:

>1278_bases
TTGAAATGGATTAAAAAGCTCTTCGGAAAGCAGGAAAGCTCACACGAGAAGAATGCTTCTATCGAGATCGGTTTTGATGA
ACTGCCTGCATGGCTTGAGGAAAGCTCTCAAAAAATATCTTCAGAAATAAAGGGGGATGTCTCAGGGCTTTTTAAAGAGC
TTGAGGCTGCGATTTCCGAGCTCAGGGAAAGCAATGACAATCTTCTGGAGGCAAAAGTTGAGGGAAATTTCGACATAAGA
GCTGTTAAGCGGGCGAAGAGTAACCGTGAAAACGTAACAAAACAGGTAGGAGTATTTATAGATAAGCTTGGGATTCCGGA
AAACACGGATTTTAAATCCCTTAAAGCGTTTCATGAATCAGCCATGCAGAGCCTGAACACCTGCCTTGAACATATGAACA
GGAGCTTCCGGTATACCAGGCCTGTCTTTCCTCAGGAGTCAAAGGACGTTACTGACAGCCTCGGCAGGCTTGGCAAGGTC
CTTAATGAGCTCAGGGAAACAATCCAGGGTCACAGGCGTGAAATGGAATCTATTGAAGAAGCTTCTAAAGGCATAAAAGA
GGTCAGAGAAACCTGTTCTTTAATAAAAGCTGAAGAGGGCGAACTCGAAGCTAAAAACCGGAAACTCCAGGCTCTGAAAG
ATGAAATAGCCAGCAACAGTCGGGCTCTCGAAGAGCTTAAACAGGGAAAAGCCTGGCAAAAACTGCAAAGACTTCAGGAA
GAGTCAACTCTTGCCGAAGGCAGGCTCAAAAAAGCCGAAGCAGGCCTGAACTCCCTGATTCTGCCTTTTTCAGGTAACCT
CTCAAGAATAAAGAAACTCCATGAAAGCGGCAAATATACACTGAAGCCTGAGGTAAAGAAACAGCTCGATATCTGCCTTG
AAAACCCTGTAAACCTTGAACCTTCCTTTTTCCCGGAGCTCCAGAAAGTTTTCGAGGACCATGCTCTTGATATACAGGCT
CAGAAAAAAGAGAAAGCTCTGGCACAGGTCAGGTCCGCAGCCTCGGGTTTTGAAGAGAAGAAAAAAGAGTATATTGAAGC
CCGGAAGGCGTTTGACTCCAGAAAATCAGAACTTGCAAGCTCGGATACCGGAGAACTTGCCTCGCTCGAACATAAGGAAG
CAGAACTTCTTTCGAGAACCCTCCTGCTTGAAGAAGAGACCGAAAGTTCCGAAAAGAAACTGGCTGCCTTAAGAGACGAT
CTCAAAACCAGAGAAGAAAAACTTCAGGCCAGTGTTGCTGCAATTGATAGCGGCGTCAAGATAGGATTCCCATCCTGA

Upstream 100 bases:

>100_bases
TTCAGGTATTAAATCTTACTGAATCACAAATATTATAAAGTTTTCTGCCTTTAAATTTATTAACCTGTATCTATCTTATC
AAATTCCGGGAAGGCCTATA

Downstream 100 bases:

>100_bases
CTTAATTCTGGTTTTTTCTCTTTTCCGGGAAGGCCGCCTCCGGTGTCGAGCGCGCAGGAATGGTTCATTATCGCGTATAA
GGTCACACCGGTCAGAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MKWIKKLFGKQESSHEKNASIEIGFDELPAWLEESSQKISSEIKGDVSGLFKELEAAISELRESNDNLLEAKVEGNFDIR
AVKRAKSNRENVTKQVGVFIDKLGIPENTDFKSLKAFHESAMQSLNTCLEHMNRSFRYTRPVFPQESKDVTDSLGRLGKV
LNELRETIQGHRREMESIEEASKGIKEVRETCSLIKAEEGELEAKNRKLQALKDEIASNSRALEELKQGKAWQKLQRLQE
ESTLAEGRLKKAEAGLNSLILPFSGNLSRIKKLHESGKYTLKPEVKKQLDICLENPVNLEPSFFPELQKVFEDHALDIQA
QKKEKALAQVRSAASGFEEKKKEYIEARKAFDSRKSELASSDTGELASLEHKEAELLSRTLLLEEETESSEKKLAALRDD
LKTREEKLQASVAAIDSGVKIGFPS

Sequences:

>Translated_425_residues
MKWIKKLFGKQESSHEKNASIEIGFDELPAWLEESSQKISSEIKGDVSGLFKELEAAISELRESNDNLLEAKVEGNFDIR
AVKRAKSNRENVTKQVGVFIDKLGIPENTDFKSLKAFHESAMQSLNTCLEHMNRSFRYTRPVFPQESKDVTDSLGRLGKV
LNELRETIQGHRREMESIEEASKGIKEVRETCSLIKAEEGELEAKNRKLQALKDEIASNSRALEELKQGKAWQKLQRLQE
ESTLAEGRLKKAEAGLNSLILPFSGNLSRIKKLHESGKYTLKPEVKKQLDICLENPVNLEPSFFPELQKVFEDHALDIQA
QKKEKALAQVRSAASGFEEKKKEYIEARKAFDSRKSELASSDTGELASLEHKEAELLSRTLLLEEETESSEKKLAALRDD
LKTREEKLQASVAAIDSGVKIGFPS
>Mature_425_residues
MKWIKKLFGKQESSHEKNASIEIGFDELPAWLEESSQKISSEIKGDVSGLFKELEAAISELRESNDNLLEAKVEGNFDIR
AVKRAKSNRENVTKQVGVFIDKLGIPENTDFKSLKAFHESAMQSLNTCLEHMNRSFRYTRPVFPQESKDVTDSLGRLGKV
LNELRETIQGHRREMESIEEASKGIKEVRETCSLIKAEEGELEAKNRKLQALKDEIASNSRALEELKQGKAWQKLQRLQE
ESTLAEGRLKKAEAGLNSLILPFSGNLSRIKKLHESGKYTLKPEVKKQLDICLENPVNLEPSFFPELQKVFEDHALDIQA
QKKEKALAQVRSAASGFEEKKKEYIEARKAFDSRKSELASSDTGELASLEHKEAELLSRTLLLEEETESSEKKLAALRDD
LKTREEKLQASVAAIDSGVKIGFPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47958; Mature: 47958

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWIKKLFGKQESSHEKNASIEIGFDELPAWLEESSQKISSEIKGDVSGLFKELEAAISE
CCHHHHHHCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRESNDNLLEAKVEGNFDIRAVKRAKSNRENVTKQVGVFIDKLGIPENTDFKSLKAFHES
HHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
AMQSLNTCLEHMNRSFRYTRPVFPQESKDVTDSLGRLGKVLNELRETIQGHRREMESIEE
HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASKGIKEVRETCSLIKAEEGELEAKNRKLQALKDEIASNSRALEELKQGKAWQKLQRLQE
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHH
ESTLAEGRLKKAEAGLNSLILPFSGNLSRIKKLHESGKYTLKPEVKKQLDICLENPVNLE
HHHHHHHHHHHHHCCHHCEECCCCCCHHHHHHHHHCCCEEECHHHHHHHHHHHCCCCCCC
PSFFPELQKVFEDHALDIQAQKKEKALAQVRSAASGFEEKKKEYIEARKAFDSRKSELAS
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC
SDTGELASLEHKEAELLSRTLLLEEETESSEKKLAALRDDLKTREEKLQASVAAIDSGVK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IGFPS
CCCCC
>Mature Secondary Structure
MKWIKKLFGKQESSHEKNASIEIGFDELPAWLEESSQKISSEIKGDVSGLFKELEAAISE
CCHHHHHHCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRESNDNLLEAKVEGNFDIRAVKRAKSNRENVTKQVGVFIDKLGIPENTDFKSLKAFHES
HHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
AMQSLNTCLEHMNRSFRYTRPVFPQESKDVTDSLGRLGKVLNELRETIQGHRREMESIEE
HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASKGIKEVRETCSLIKAEEGELEAKNRKLQALKDEIASNSRALEELKQGKAWQKLQRLQE
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHH
ESTLAEGRLKKAEAGLNSLILPFSGNLSRIKKLHESGKYTLKPEVKKQLDICLENPVNLE
HHHHHHHHHHHHHCCHHCEECCCCCCHHHHHHHHHCCCEEECHHHHHHHHHHHCCCCCCC
PSFFPELQKVFEDHALDIQAQKKEKALAQVRSAASGFEEKKKEYIEARKAFDSRKSELAS
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC
SDTGELASLEHKEAELLSRTLLLEEETESSEKKLAALRDDLKTREEKLQASVAAIDSGVK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IGFPS
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA