Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226336

Identifier: 21226336

GI number: 21226336

Start: 313694

End: 315154

Strand: Reverse

Name: 21226336

Synonym: MM_0234

Alternate gene names: NA

Gene position: 315154-313694 (Counterclockwise)

Preceding gene: 21226337

Following gene: 21226335

Centisome position: 7.69

GC content: 46.89

Gene sequence:

>1461_bases
ATGTATGAACAGGCATCAGGAGCTACTTCTACTCTTACTGTGAAGCCTAGCGGTGGTGGGGATTTTTCTTCAATCTCAGA
TGCGGTAAACTACAGCAGACCAGGGGACTCAATTTTTGTATATCCGGGAATATACCGGGAAAATATAGACCTTCCCTGGT
CCCTTAACTTAAGTTCTGCTTCCGGGAAGCCTGAAGACACAGTTCTGGAAGCTGAAAACTTACAGGAGCCTGTTCTTCAT
GTGACTGCAAATTCCGTAAACATCACAGGATTCAGAATAAACGGCCCTTCAGGGGCTGGCATTTATCTCGAAAGTGTGGG
AAGCTGTGAACTTAAAAATAACAGAATATCAGGTTGCACGCAGGGAGTCCTGTTTGAGGGTTCATCAAACAACACCCTTC
AGGGCAATAATCTCTCAAACAATACGGAAGGGCTCAGGTTAACGGATTCTTTCCTCAATACAATCTTCGAAAATGAATTT
GAAAATGGAATCAATGTTAATGAAAGCTTAAGTCAAAACTTTCCGGAAGAAGAAAGGTTTTCAGGTCTTCCAAACAACTG
GAACACGGCTGAAGGTATAAAATATCTCTATAACGGCGGGATTTACGAAAGCCGTTTTGGAAACTTTTACTCTGATTACC
AGGGCACGGACGCAAACGGAAGCGGGATAGGGGACCTTCCTTACGGCAGTGATTCCTTCCCACTTACTGCCAGACCGGCA
TCATATTCCACGGGTTTCGAGATAGGGAATATAAGTCCTGCACGGGACTCAGCCTCAGTTGAAGGGGATGTGCTGGATTT
TGGAGTCAGGTCCACGAGAAACTGCACTTTTAGCTGGCTTATAAACGGAACCCTGGTGCAGACAAATGAATCTGCTTCTT
CTGCTGTTTTTTCAATTAATACTGGGGAGTTGAGAGGCATAATTACAGAAAACAGCGACACCGATTCTCACGGGTCTAAA
TACAATCTGACAGTTATTGCAGCAAACGGCTCTTCACTCCTGCAACACAGCTGGAACTGGACTGTTTATCCTGCAGAAAC
AGGGGCAAACACATCCGGGAATGTGAGTGAAGATAATATAATCAGGAGCATCAGTTATGAAGGGAATGGCGGTAAGAGTA
CGGGAGGGAAAGCGGGCGAAGGACGCGGCGGGATTTCCAGTTTTCCTGAGCCTTCGGGTAATGTCGAGAACAGGGGAACA
GCCGGTACCTCACCTTTTTCAGCCGCCGGTCAGGAGCAGGGCGAGCCTTTGCAGTTCTCCTCTCATACCGCGCAGAATAA
TTCTCCTGGAAAAGGTCCTGACGGGGCTCCGGAACTCTGGGTCGCACGTGAAAATGAAAGCGGCTCATCAGAAGAAGAAA
GCGGAGAGGACAGAAATGTTCCCAGGAATGTCCCTTCTCTCACGTCAGGGACATCTATCTTTATCCTGCTTACAGGTGCA
CTGTGCATTAAAAGGGAATGA

Upstream 100 bases:

>100_bases
GGCTATGGATATAAGGCGGCTGCTCTATACTTCTTCGACAGACCTCGGTAATCCCGGCTATGATACTATTTTCGGCCACG
GGCTTGTGGATGCTTTAAAA

Downstream 100 bases:

>100_bases
AATGAATATTAGGAAATGAAATGGAGATCCAAAAATCTGGGTGCAATGAATAAAGGCTGTCTCCAGGCCCTGAATCTTTA
ATTTTGAACCTCTAACTATG

Product: hypothetical protein

Products: NA

Alternate protein names: Cell Surface Glycoprotein; Surface Layer Protein B; Cell Surfacr Protein; Parallel Beta-Helix Repeat-Containing Protein

Number of amino acids: Translated: 486; Mature: 486

Protein sequence:

>486_residues
MYEQASGATSTLTVKPSGGGDFSSISDAVNYSRPGDSIFVYPGIYRENIDLPWSLNLSSASGKPEDTVLEAENLQEPVLH
VTANSVNITGFRINGPSGAGIYLESVGSCELKNNRISGCTQGVLFEGSSNNTLQGNNLSNNTEGLRLTDSFLNTIFENEF
ENGINVNESLSQNFPEEERFSGLPNNWNTAEGIKYLYNGGIYESRFGNFYSDYQGTDANGSGIGDLPYGSDSFPLTARPA
SYSTGFEIGNISPARDSASVEGDVLDFGVRSTRNCTFSWLINGTLVQTNESASSAVFSINTGELRGIITENSDTDSHGSK
YNLTVIAANGSSLLQHSWNWTVYPAETGANTSGNVSEDNIIRSISYEGNGGKSTGGKAGEGRGGISSFPEPSGNVENRGT
AGTSPFSAAGQEQGEPLQFSSHTAQNNSPGKGPDGAPELWVARENESGSSEEESGEDRNVPRNVPSLTSGTSIFILLTGA
LCIKRE

Sequences:

>Translated_486_residues
MYEQASGATSTLTVKPSGGGDFSSISDAVNYSRPGDSIFVYPGIYRENIDLPWSLNLSSASGKPEDTVLEAENLQEPVLH
VTANSVNITGFRINGPSGAGIYLESVGSCELKNNRISGCTQGVLFEGSSNNTLQGNNLSNNTEGLRLTDSFLNTIFENEF
ENGINVNESLSQNFPEEERFSGLPNNWNTAEGIKYLYNGGIYESRFGNFYSDYQGTDANGSGIGDLPYGSDSFPLTARPA
SYSTGFEIGNISPARDSASVEGDVLDFGVRSTRNCTFSWLINGTLVQTNESASSAVFSINTGELRGIITENSDTDSHGSK
YNLTVIAANGSSLLQHSWNWTVYPAETGANTSGNVSEDNIIRSISYEGNGGKSTGGKAGEGRGGISSFPEPSGNVENRGT
AGTSPFSAAGQEQGEPLQFSSHTAQNNSPGKGPDGAPELWVARENESGSSEEESGEDRNVPRNVPSLTSGTSIFILLTGA
LCIKRE
>Mature_486_residues
MYEQASGATSTLTVKPSGGGDFSSISDAVNYSRPGDSIFVYPGIYRENIDLPWSLNLSSASGKPEDTVLEAENLQEPVLH
VTANSVNITGFRINGPSGAGIYLESVGSCELKNNRISGCTQGVLFEGSSNNTLQGNNLSNNTEGLRLTDSFLNTIFENEF
ENGINVNESLSQNFPEEERFSGLPNNWNTAEGIKYLYNGGIYESRFGNFYSDYQGTDANGSGIGDLPYGSDSFPLTARPA
SYSTGFEIGNISPARDSASVEGDVLDFGVRSTRNCTFSWLINGTLVQTNESASSAVFSINTGELRGIITENSDTDSHGSK
YNLTVIAANGSSLLQHSWNWTVYPAETGANTSGNVSEDNIIRSISYEGNGGKSTGGKAGEGRGGISSFPEPSGNVENRGT
AGTSPFSAAGQEQGEPLQFSSHTAQNNSPGKGPDGAPELWVARENESGSSEEESGEDRNVPRNVPSLTSGTSIFILLTGA
LCIKRE

Specific function: Unknown

COG id: COG1404

COG function: function code O; Subtilisin-like serine proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51507; Mature: 51507

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYEQASGATSTLTVKPSGGGDFSSISDAVNYSRPGDSIFVYPGIYRENIDLPWSLNLSSA
CCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCEEEECCCEEECCCCCCEEEECCCC
SGKPEDTVLEAENLQEPVLHVTANSVNITGFRINGPSGAGIYLESVGSCELKNNRISGCT
CCCCCCEEEEHHCCCCCEEEEEECEEEEEEEEEECCCCCCEEEECCCCEEECCCCCCCCC
QGVLFEGSSNNTLQGNNLSNNTEGLRLTDSFLNTIFENEFENGINVNESLSQNFPEEERF
CCEEEECCCCCEEECCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHH
SGLPNNWNTAEGIKYLYNGGIYESRFGNFYSDYQGTDANGSGIGDLPYGSDSFPLTARPA
CCCCCCCCHHHHHHHHHCCCEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC
SYSTGFEIGNISPARDSASVEGDVLDFGVRSTRNCTFSWLINGTLVQTNESASSAVFSIN
CCCCCEEECCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECEEEECCCCCCCEEEEEE
TGELRGIITENSDTDSHGSKYNLTVIAANGSSLLQHSWNWTVYPAETGANTSGNVSEDNI
CCCEEEEEECCCCCCCCCCEEEEEEEEECCCHHHHCCCCEEEEECCCCCCCCCCCCCCCE
IRSISYEGNGGKSTGGKAGEGRGGISSFPEPSGNVENRGTAGTSPFSAAGQEQGEPLQFS
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
SHTAQNNSPGKGPDGAPELWVARENESGSSEEESGEDRNVPRNVPSLTSGTSIFILLTGA
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC
LCIKRE
EEEECC
>Mature Secondary Structure
MYEQASGATSTLTVKPSGGGDFSSISDAVNYSRPGDSIFVYPGIYRENIDLPWSLNLSSA
CCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCEEEECCCEEECCCCCCEEEECCCC
SGKPEDTVLEAENLQEPVLHVTANSVNITGFRINGPSGAGIYLESVGSCELKNNRISGCT
CCCCCCEEEEHHCCCCCEEEEEECEEEEEEEEEECCCCCCEEEECCCCEEECCCCCCCCC
QGVLFEGSSNNTLQGNNLSNNTEGLRLTDSFLNTIFENEFENGINVNESLSQNFPEEERF
CCEEEECCCCCEEECCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHH
SGLPNNWNTAEGIKYLYNGGIYESRFGNFYSDYQGTDANGSGIGDLPYGSDSFPLTARPA
CCCCCCCCHHHHHHHHHCCCEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC
SYSTGFEIGNISPARDSASVEGDVLDFGVRSTRNCTFSWLINGTLVQTNESASSAVFSIN
CCCCCEEECCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECEEEECCCCCCCEEEEEE
TGELRGIITENSDTDSHGSKYNLTVIAANGSSLLQHSWNWTVYPAETGANTSGNVSEDNI
CCCEEEEEECCCCCCCCCCEEEEEEEEECCCHHHHCCCCEEEEECCCCCCCCCCCCCCCE
IRSISYEGNGGKSTGGKAGEGRGGISSFPEPSGNVENRGTAGTSPFSAAGQEQGEPLQFS
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
SHTAQNNSPGKGPDGAPELWVARENESGSSEEESGEDRNVPRNVPSLTSGTSIFILLTGA
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC
LCIKRE
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA