Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226302

Identifier: 21226302

GI number: 21226302

Start: 277460

End: 277798

Strand: Direct

Name: 21226302

Synonym: MM_0200

Alternate gene names: NA

Gene position: 277460-277798 (Clockwise)

Preceding gene: 21226299

Following gene: 21226303

Centisome position: 6.77

GC content: 34.81

Gene sequence:

>339_bases
ATGGATGTAGTCACTTTATTAAATTGTTTATCTGAAATTGAAATAGATAATCTACGTGCTACATATCATTTTCAAGAAAG
AATTCGGGAACGTAAAAGTGAAATACATCCAGACTTAAATGAAATATACAACATAATCCTTAAAGAACAGCCTGTTGGTA
TCCTTAAACAGGAGCAAGAAAAGTTCAAACTCTATTACGAAAGAAACGAGAGTTATGACCTTATCGTCATAGTAAGTATT
AAGAGCACAAATCCAACAATACTTAACCTTGTGACCTGTTTCCTTGAAGATGCAAAAAAGAGGAGGCGGCCGGATGAGGC
AAGAATCCCTGGTAACTAA

Upstream 100 bases:

>100_bases
TACAGAAATAATATGTTACCTACCTTCGACAAAAGAAATCTAAGACTATAAATAGAATAAGACAACATCTTAAATTTTAA
AGCAACCGTGAGGTCACTGG

Downstream 100 bases:

>100_bases
GTACGATTACGATTTCGAAAATGATAGCATTTTCTTTTACGGAAGCAACAAGAAGTACAGGTCTTCCATAGATCTGGACG
GAATAATCCTTGATATTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MDVVTLLNCLSEIEIDNLRATYHFQERIRERKSEIHPDLNEIYNIILKEQPVGILKQEQEKFKLYYERNESYDLIVIVSI
KSTNPTILNLVTCFLEDAKKRRRPDEARIPGN

Sequences:

>Translated_112_residues
MDVVTLLNCLSEIEIDNLRATYHFQERIRERKSEIHPDLNEIYNIILKEQPVGILKQEQEKFKLYYERNESYDLIVIVSI
KSTNPTILNLVTCFLEDAKKRRRPDEARIPGN
>Mature_112_residues
MDVVTLLNCLSEIEIDNLRATYHFQERIRERKSEIHPDLNEIYNIILKEQPVGILKQEQEKFKLYYERNESYDLIVIVSI
KSTNPTILNLVTCFLEDAKKRRRPDEARIPGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13290; Mature: 13290

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVVTLLNCLSEIEIDNLRATYHFQERIRERKSEIHPDLNEIYNIILKEQPVGILKQEQE
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHH
KFKLYYERNESYDLIVIVSIKSTNPTILNLVTCFLEDAKKRRRPDEARIPGN
HHHHHEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MDVVTLLNCLSEIEIDNLRATYHFQERIRERKSEIHPDLNEIYNIILKEQPVGILKQEQE
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHH
KFKLYYERNESYDLIVIVSIKSTNPTILNLVTCFLEDAKKRRRPDEARIPGN
HHHHHEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA