Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226302
Identifier: 21226302
GI number: 21226302
Start: 277460
End: 277798
Strand: Direct
Name: 21226302
Synonym: MM_0200
Alternate gene names: NA
Gene position: 277460-277798 (Clockwise)
Preceding gene: 21226299
Following gene: 21226303
Centisome position: 6.77
GC content: 34.81
Gene sequence:
>339_bases ATGGATGTAGTCACTTTATTAAATTGTTTATCTGAAATTGAAATAGATAATCTACGTGCTACATATCATTTTCAAGAAAG AATTCGGGAACGTAAAAGTGAAATACATCCAGACTTAAATGAAATATACAACATAATCCTTAAAGAACAGCCTGTTGGTA TCCTTAAACAGGAGCAAGAAAAGTTCAAACTCTATTACGAAAGAAACGAGAGTTATGACCTTATCGTCATAGTAAGTATT AAGAGCACAAATCCAACAATACTTAACCTTGTGACCTGTTTCCTTGAAGATGCAAAAAAGAGGAGGCGGCCGGATGAGGC AAGAATCCCTGGTAACTAA
Upstream 100 bases:
>100_bases TACAGAAATAATATGTTACCTACCTTCGACAAAAGAAATCTAAGACTATAAATAGAATAAGACAACATCTTAAATTTTAA AGCAACCGTGAGGTCACTGG
Downstream 100 bases:
>100_bases GTACGATTACGATTTCGAAAATGATAGCATTTTCTTTTACGGAAGCAACAAGAAGTACAGGTCTTCCATAGATCTGGACG GAATAATCCTTGATATTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MDVVTLLNCLSEIEIDNLRATYHFQERIRERKSEIHPDLNEIYNIILKEQPVGILKQEQEKFKLYYERNESYDLIVIVSI KSTNPTILNLVTCFLEDAKKRRRPDEARIPGN
Sequences:
>Translated_112_residues MDVVTLLNCLSEIEIDNLRATYHFQERIRERKSEIHPDLNEIYNIILKEQPVGILKQEQEKFKLYYERNESYDLIVIVSI KSTNPTILNLVTCFLEDAKKRRRPDEARIPGN >Mature_112_residues MDVVTLLNCLSEIEIDNLRATYHFQERIRERKSEIHPDLNEIYNIILKEQPVGILKQEQEKFKLYYERNESYDLIVIVSI KSTNPTILNLVTCFLEDAKKRRRPDEARIPGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13290; Mature: 13290
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVVTLLNCLSEIEIDNLRATYHFQERIRERKSEIHPDLNEIYNIILKEQPVGILKQEQE CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHH KFKLYYERNESYDLIVIVSIKSTNPTILNLVTCFLEDAKKRRRPDEARIPGN HHHHHEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MDVVTLLNCLSEIEIDNLRATYHFQERIRERKSEIHPDLNEIYNIILKEQPVGILKQEQE CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHH KFKLYYERNESYDLIVIVSIKSTNPTILNLVTCFLEDAKKRRRPDEARIPGN HHHHHEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA