Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is czcD [C]

Identifier: 21226269

GI number: 21226269

Start: 217859

End: 218950

Strand: Direct

Name: czcD [C]

Synonym: MM_0167

Alternate gene names: 21226269

Gene position: 217859-218950 (Clockwise)

Preceding gene: 21226268

Following gene: 21226275

Centisome position: 5.32

GC content: 47.44

Gene sequence:

>1092_bases
ATGTCAGAAAAGCATTCCAATTATCATTCACACGGGAAGAAGGAAAGTTCCGAACAGTCACATAAGAGTTATGAGCACGC
CTGTACTCATTCCAGAACTCACTCCCACAGGCACAGTCATACTCACGGAGCTGTAGATCCTTCAATAACTGCTACCAGCA
GAGGGCTCTGGGCTGTCAAATGGTCTTTCATAGGGCTTATGGTCACAGCCGTCCTGCAGATTTTCATTGTGTATGTCTCG
GGCAGTGTTGCCCTTCTTGCTGATACCATCCATAACTTCGGAGACGCATCAACAGCAATCCCCCTTGCAATAGCTTTTTC
CCTCGCAAAAAGGAAGCCGAGCAAAAGCTTTTCTTACGGATACGGCAGGGTAGAAGATCTTGCAGGTGTAATCATTGTTT
TTCTGATCCTTTTCAGCGCAGCAGTTGCAGGCTATGAGTCCGTAACCCGCTTTTTAAATCCCCAGCCCGTAGATCATTTG
GAAGCTGTAGCTCTTGCAGCAATCATAGGCTGTATCGGAAACGAAGTTGTTGCCGAATTCCGCATGAAAGTTGGAAAAGA
AATCGGGAGTGCAGCCCTTGTCGCAGATGGATATCATGCCAGGGTGGACGGCTTTACCAGCCTTGCTGTCCTGTTAGGGG
CAATCGGTGTGTGGTCAGGATTTCCGGTCCTTGACCCTCTTATAGGCATGCTGATAACAATAACCATTCTCAAAATAGTT
CTTGATTCCAGTAAACTCGTATTTACTCGCCTGCTTGACGGCGTTGAGCCTGAAATTATCGACAGGGTAAAAAATATTGC
TGAAAGCGTTGAAGGTGTCTGTGAAGTAACAGACCTCAGGGTGCGCTGGATAGGGCACAGGCTCCATGCAGAGATCAAGG
CATCCGTTTCCTCTTCACTTTCCGTTGAAGAGGGGCACGAAATTGCCAGCGCAGTGGAAAAAAAGCTTCTGGAGAATTTT
TCCTATCTTTCCTACACCACTATCCGCGTAGACCCCCTGAAAGCCTCAGGGGAATGCTGTCACAGCGGGACCGAAAATCC
AGATATGCAACATGGAAAACAAACACACGTTGTAAATGTCTATCCTCAATGA

Upstream 100 bases:

>100_bases
AATTAAATCTTCTTCTATGAATTTCAGATGAGCATATAATAGTCAATAGAGTATCCGATAAAAAAATTGTTTTAAAAAAT
CTTATTGATCTGGAGTAATC

Downstream 100 bases:

>100_bases
GTCCAGATAGTTGGTTTCATCAAACCTTTATAGGATTTCCACAACTGAACTGAAAAAAGGGCTTTATATTTCTTTTTAGG
GATCATTGCTTAAGTATATC

Product: cobalt-zinc-cadmium resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:

>363_residues
MSEKHSNYHSHGKKESSEQSHKSYEHACTHSRTHSHRHSHTHGAVDPSITATSRGLWAVKWSFIGLMVTAVLQIFIVYVS
GSVALLADTIHNFGDASTAIPLAIAFSLAKRKPSKSFSYGYGRVEDLAGVIIVFLILFSAAVAGYESVTRFLNPQPVDHL
EAVALAAIIGCIGNEVVAEFRMKVGKEIGSAALVADGYHARVDGFTSLAVLLGAIGVWSGFPVLDPLIGMLITITILKIV
LDSSKLVFTRLLDGVEPEIIDRVKNIAESVEGVCEVTDLRVRWIGHRLHAEIKASVSSSLSVEEGHEIASAVEKKLLENF
SYLSYTTIRVDPLKASGECCHSGTENPDMQHGKQTHVVNVYPQ

Sequences:

>Translated_363_residues
MSEKHSNYHSHGKKESSEQSHKSYEHACTHSRTHSHRHSHTHGAVDPSITATSRGLWAVKWSFIGLMVTAVLQIFIVYVS
GSVALLADTIHNFGDASTAIPLAIAFSLAKRKPSKSFSYGYGRVEDLAGVIIVFLILFSAAVAGYESVTRFLNPQPVDHL
EAVALAAIIGCIGNEVVAEFRMKVGKEIGSAALVADGYHARVDGFTSLAVLLGAIGVWSGFPVLDPLIGMLITITILKIV
LDSSKLVFTRLLDGVEPEIIDRVKNIAESVEGVCEVTDLRVRWIGHRLHAEIKASVSSSLSVEEGHEIASAVEKKLLENF
SYLSYTTIRVDPLKASGECCHSGTENPDMQHGKQTHVVNVYPQ
>Mature_362_residues
SEKHSNYHSHGKKESSEQSHKSYEHACTHSRTHSHRHSHTHGAVDPSITATSRGLWAVKWSFIGLMVTAVLQIFIVYVSG
SVALLADTIHNFGDASTAIPLAIAFSLAKRKPSKSFSYGYGRVEDLAGVIIVFLILFSAAVAGYESVTRFLNPQPVDHLE
AVALAAIIGCIGNEVVAEFRMKVGKEIGSAALVADGYHARVDGFTSLAVLLGAIGVWSGFPVLDPLIGMLITITILKIVL
DSSKLVFTRLLDGVEPEIIDRVKNIAESVEGVCEVTDLRVRWIGHRLHAEIKASVSSSLSVEEGHEIASAVEKKLLENFS
YLSYTTIRVDPLKASGECCHSGTENPDMQHGKQTHVVNVYPQ

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=256, Percent_Identity=26.953125, Blast_Score=75, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 39407; Mature: 39275

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKHSNYHSHGKKESSEQSHKSYEHACTHSRTHSHRHSHTHGAVDPSITATSRGLWAVK
CCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH
WSFIGLMVTAVLQIFIVYVSGSVALLADTIHNFGDASTAIPLAIAFSLAKRKPSKSFSYG
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCC
YGRVEDLAGVIIVFLILFSAAVAGYESVTRFLNPQPVDHLEAVALAAIIGCIGNEVVAEF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RMKVGKEIGSAALVADGYHARVDGFTSLAVLLGAIGVWSGFPVLDPLIGMLITITILKIV
HHHHHHHHCCHHEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LDSSKLVFTRLLDGVEPEIIDRVKNIAESVEGVCEVTDLRVRWIGHRLHAEIKASVSSSL
HCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SVEEGHEIASAVEKKLLENFSYLSYTTIRVDPLKASGECCHSGTENPDMQHGKQTHVVNV
CHHHHHHHHHHHHHHHHHCCCHHEEEEEEEECCCCCCHHHCCCCCCCCCCCCCCCCEEEE
YPQ
CCC
>Mature Secondary Structure 
SEKHSNYHSHGKKESSEQSHKSYEHACTHSRTHSHRHSHTHGAVDPSITATSRGLWAVK
CCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH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CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]