Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21226255

Identifier: 21226255

GI number: 21226255

Start: 193892

End: 194464

Strand: Direct

Name: 21226255

Synonym: MM_0153

Alternate gene names: NA

Gene position: 193892-194464 (Clockwise)

Preceding gene: 21226252

Following gene: 21226256

Centisome position: 4.73

GC content: 37.7

Gene sequence:

>573_bases
ATGAAACTTGAAGAGCGTCTGGAACTCTTTAAAGAAAAGATAAAAACAACGGATTTTCTGGAATGTAAAGGATTGGGAAA
TGAAATCCCATACTGGATATTTGATTATGAGCCTGATAAAGAGCTTCTAGTCAGAGACACAATTGAAAAGATGGTTACAG
GCTTTGAGACCAAATATTCTCTTAAAATAATTGAGATTAACCTGTACGATCTGTGTCTCAAAATACTAAGTCAGAAGCTT
AGTGATGAAAAAATAACCCAGTTTGAAAGGAAAAAGGGTTCAGACGCCTTACTTGAGAAGATAAGACTTATTCTTAACCA
GGATGCTACAAAGAAAGAAATCTCCGAGATACTTCAGGGAAACTATGATATTATTTTCCTGACAGGAGTGGGAAATGCCT
GGCCAATGGTCAGAGCTCATTCTGTCCTTAATAACCTTCATTCCGTTACAGGTAAAAAGCCTCTTGTGATGTTTTATCCT
GGAAAATTCAGCGGGCTTGACCTGAGCTTATTTGGAGAATTCAAAAGCAAGAACTACTACAGAGCTTTCCGCTTGATGCC
AGAGGCAATGTAA

Upstream 100 bases:

>100_bases
AACAGCTTACTGAGACTTTTGACTCAGAAGCTTAAAAAAGATAATACAGTACTGGCTGAAAATAATAACCGATTTATAGA
TAGTGCTGTATTCTAAATTT

Downstream 100 bases:

>100_bases
ATTTTAGAAATTTGTTCGGGACTACTCTATGGAGAGTTTCAGGTTTTCAGATAACATCCAGAATCTTAAATTTAACTCAC
ATAGAAACTCAATTCAAACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MKLEERLELFKEKIKTTDFLECKGLGNEIPYWIFDYEPDKELLVRDTIEKMVTGFETKYSLKIIEINLYDLCLKILSQKL
SDEKITQFERKKGSDALLEKIRLILNQDATKKEISEILQGNYDIIFLTGVGNAWPMVRAHSVLNNLHSVTGKKPLVMFYP
GKFSGLDLSLFGEFKSKNYYRAFRLMPEAM

Sequences:

>Translated_190_residues
MKLEERLELFKEKIKTTDFLECKGLGNEIPYWIFDYEPDKELLVRDTIEKMVTGFETKYSLKIIEINLYDLCLKILSQKL
SDEKITQFERKKGSDALLEKIRLILNQDATKKEISEILQGNYDIIFLTGVGNAWPMVRAHSVLNNLHSVTGKKPLVMFYP
GKFSGLDLSLFGEFKSKNYYRAFRLMPEAM
>Mature_190_residues
MKLEERLELFKEKIKTTDFLECKGLGNEIPYWIFDYEPDKELLVRDTIEKMVTGFETKYSLKIIEINLYDLCLKILSQKL
SDEKITQFERKKGSDALLEKIRLILNQDATKKEISEILQGNYDIIFLTGVGNAWPMVRAHSVLNNLHSVTGKKPLVMFYP
GKFSGLDLSLFGEFKSKNYYRAFRLMPEAM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22147; Mature: 22147

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLEERLELFKEKIKTTDFLECKGLGNEIPYWIFDYEPDKELLVRDTIEKMVTGFETKYS
CCHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEE
LKIIEINLYDLCLKILSQKLSDEKITQFERKKGSDALLEKIRLILNQDATKKEISEILQG
EEEEEECHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHCC
NYDIIFLTGVGNAWPMVRAHSVLNNLHSVTGKKPLVMFYPGKFSGLDLSLFGEFKSKNYY
CCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHEEECCCCCCHH
RAFRLMPEAM
HHHHHCCCCC
>Mature Secondary Structure
MKLEERLELFKEKIKTTDFLECKGLGNEIPYWIFDYEPDKELLVRDTIEKMVTGFETKYS
CCHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEE
LKIIEINLYDLCLKILSQKLSDEKITQFERKKGSDALLEKIRLILNQDATKKEISEILQG
EEEEEECHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHCC
NYDIIFLTGVGNAWPMVRAHSVLNNLHSVTGKKPLVMFYPGKFSGLDLSLFGEFKSKNYY
CCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHEEECCCCCCHH
RAFRLMPEAM
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA