Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226255
Identifier: 21226255
GI number: 21226255
Start: 193892
End: 194464
Strand: Direct
Name: 21226255
Synonym: MM_0153
Alternate gene names: NA
Gene position: 193892-194464 (Clockwise)
Preceding gene: 21226252
Following gene: 21226256
Centisome position: 4.73
GC content: 37.7
Gene sequence:
>573_bases ATGAAACTTGAAGAGCGTCTGGAACTCTTTAAAGAAAAGATAAAAACAACGGATTTTCTGGAATGTAAAGGATTGGGAAA TGAAATCCCATACTGGATATTTGATTATGAGCCTGATAAAGAGCTTCTAGTCAGAGACACAATTGAAAAGATGGTTACAG GCTTTGAGACCAAATATTCTCTTAAAATAATTGAGATTAACCTGTACGATCTGTGTCTCAAAATACTAAGTCAGAAGCTT AGTGATGAAAAAATAACCCAGTTTGAAAGGAAAAAGGGTTCAGACGCCTTACTTGAGAAGATAAGACTTATTCTTAACCA GGATGCTACAAAGAAAGAAATCTCCGAGATACTTCAGGGAAACTATGATATTATTTTCCTGACAGGAGTGGGAAATGCCT GGCCAATGGTCAGAGCTCATTCTGTCCTTAATAACCTTCATTCCGTTACAGGTAAAAAGCCTCTTGTGATGTTTTATCCT GGAAAATTCAGCGGGCTTGACCTGAGCTTATTTGGAGAATTCAAAAGCAAGAACTACTACAGAGCTTTCCGCTTGATGCC AGAGGCAATGTAA
Upstream 100 bases:
>100_bases AACAGCTTACTGAGACTTTTGACTCAGAAGCTTAAAAAAGATAATACAGTACTGGCTGAAAATAATAACCGATTTATAGA TAGTGCTGTATTCTAAATTT
Downstream 100 bases:
>100_bases ATTTTAGAAATTTGTTCGGGACTACTCTATGGAGAGTTTCAGGTTTTCAGATAACATCCAGAATCTTAAATTTAACTCAC ATAGAAACTCAATTCAAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MKLEERLELFKEKIKTTDFLECKGLGNEIPYWIFDYEPDKELLVRDTIEKMVTGFETKYSLKIIEINLYDLCLKILSQKL SDEKITQFERKKGSDALLEKIRLILNQDATKKEISEILQGNYDIIFLTGVGNAWPMVRAHSVLNNLHSVTGKKPLVMFYP GKFSGLDLSLFGEFKSKNYYRAFRLMPEAM
Sequences:
>Translated_190_residues MKLEERLELFKEKIKTTDFLECKGLGNEIPYWIFDYEPDKELLVRDTIEKMVTGFETKYSLKIIEINLYDLCLKILSQKL SDEKITQFERKKGSDALLEKIRLILNQDATKKEISEILQGNYDIIFLTGVGNAWPMVRAHSVLNNLHSVTGKKPLVMFYP GKFSGLDLSLFGEFKSKNYYRAFRLMPEAM >Mature_190_residues MKLEERLELFKEKIKTTDFLECKGLGNEIPYWIFDYEPDKELLVRDTIEKMVTGFETKYSLKIIEINLYDLCLKILSQKL SDEKITQFERKKGSDALLEKIRLILNQDATKKEISEILQGNYDIIFLTGVGNAWPMVRAHSVLNNLHSVTGKKPLVMFYP GKFSGLDLSLFGEFKSKNYYRAFRLMPEAM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22147; Mature: 22147
Theoretical pI: Translated: 8.16; Mature: 8.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLEERLELFKEKIKTTDFLECKGLGNEIPYWIFDYEPDKELLVRDTIEKMVTGFETKYS CCHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEE LKIIEINLYDLCLKILSQKLSDEKITQFERKKGSDALLEKIRLILNQDATKKEISEILQG EEEEEECHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHCC NYDIIFLTGVGNAWPMVRAHSVLNNLHSVTGKKPLVMFYPGKFSGLDLSLFGEFKSKNYY CCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHEEECCCCCCHH RAFRLMPEAM HHHHHCCCCC >Mature Secondary Structure MKLEERLELFKEKIKTTDFLECKGLGNEIPYWIFDYEPDKELLVRDTIEKMVTGFETKYS CCHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEE LKIIEINLYDLCLKILSQKLSDEKITQFERKKGSDALLEKIRLILNQDATKKEISEILQG EEEEEECHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHCC NYDIIFLTGVGNAWPMVRAHSVLNNLHSVTGKKPLVMFYPGKFSGLDLSLFGEFKSKNYY CCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHEEECCCCCCHH RAFRLMPEAM HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA