Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226243

Identifier: 21226243

GI number: 21226243

Start: 176529

End: 177056

Strand: Direct

Name: 21226243

Synonym: MM_0141

Alternate gene names: NA

Gene position: 176529-177056 (Clockwise)

Preceding gene: 21226239

Following gene: 21226244

Centisome position: 4.31

GC content: 47.73

Gene sequence:

>528_bases
ATGATCCCTGCTTACCTTTCCAATCCCTTCGCAGCTGTTTTCGGGGGCGGAAAACCGATTGATGGAGGCAGGACATATAA
AGACGGGAGAAGGATCCTCGGAGACGGAAAGACATATAGAGGGCTCTTTTCAGGCATATTTTGCGGGTTTCTTGCAGGCT
GTGTTGAGGTATGGCTGAGTTTCAGAGGGTTTGAGATACTGGGAATCGAAATGCCCGGATTCGGCCCGGATTATACAAGT
TCGTTGATAGTTGTGCTTGCCCTTGCTTCAGGTGCGCTTTTCGGGGACATGTTCAAGAGCTTTTTCAAACGCAGGATGGG
ACTGAAAAGGGGAGCGTCACTGCCTCTCGTGGACCAGCTTGACTTTGTGGTCGGAGCCTGGGTATTTACATACCTTGCTG
CCCCGGAGTGGTTCGTGAGTAATTTTACTCCGGGAATCATGCTTACAGTTATTATAATAACGCCTCTACTACATCTTACG
ACAAACATAATCGGATATTTTATAGGTGTAAAGAAAGAACCGTGGTGA

Upstream 100 bases:

>100_bases
ATAAGGGTGTGGGAAGGATTAACTTCTGCCCCGGAAAAAAGTAACAAGGAATTAAAGAGATGATACCACGATAGAGCTGA
TAATCAAAGCGTTCTGGCTG

Downstream 100 bases:

>100_bases
AAATTTCCGGGGAATTTAATAATATCCTTACAGGAAAAATCTAAGAAAACACATATAGCATTAATAAGGCTGCAAATACC
GGTGAGAAAATGAGCAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MIPAYLSNPFAAVFGGGKPIDGGRTYKDGRRILGDGKTYRGLFSGIFCGFLAGCVEVWLSFRGFEILGIEMPGFGPDYTS
SLIVVLALASGALFGDMFKSFFKRRMGLKRGASLPLVDQLDFVVGAWVFTYLAAPEWFVSNFTPGIMLTVIIITPLLHLT
TNIIGYFIGVKKEPW

Sequences:

>Translated_175_residues
MIPAYLSNPFAAVFGGGKPIDGGRTYKDGRRILGDGKTYRGLFSGIFCGFLAGCVEVWLSFRGFEILGIEMPGFGPDYTS
SLIVVLALASGALFGDMFKSFFKRRMGLKRGASLPLVDQLDFVVGAWVFTYLAAPEWFVSNFTPGIMLTVIIITPLLHLT
TNIIGYFIGVKKEPW
>Mature_175_residues
MIPAYLSNPFAAVFGGGKPIDGGRTYKDGRRILGDGKTYRGLFSGIFCGFLAGCVEVWLSFRGFEILGIEMPGFGPDYTS
SLIVVLALASGALFGDMFKSFFKRRMGLKRGASLPLVDQLDFVVGAWVFTYLAAPEWFVSNFTPGIMLTVIIITPLLHLT
TNIIGYFIGVKKEPW

Specific function: Unknown

COG id: COG0575

COG function: function code I; CDP-diglyceride synthetase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0290 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y141_METMA (Q8Q0J5)

Other databases:

- EMBL:   AE008384
- RefSeq:   NP_632165.1
- GeneID:   1478483
- GenomeReviews:   AE008384_GR
- KEGG:   mma:MM_0141
- NMPDR:   fig|192952.1.peg.141
- HOGENOM:   HBG297562
- OMA:   GKTWRGT
- ProtClustDB:   PRK04032
- BioCyc:   MMAZ192952:MM0141-MONOMER
- HAMAP:   MF_01117
- InterPro:   IPR002726

Pfam domain/function: PF01864 DUF46

EC number: NA

Molecular weight: Translated: 19180; Mature: 19180

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x91f9ed4)-; HASH(0xaf4e56c)-; HASH(0xb08df88)-; HASH(0xbaaab60)-;

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPAYLSNPFAAVFGGGKPIDGGRTYKDGRRILGDGKTYRGLFSGIFCGFLAGCVEVWLS
CCCCCCCCCHHEEECCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
FRGFEILGIEMPGFGPDYTSSLIVVLALASGALFGDMFKSFFKRRMGLKRGASLPLVDQL
HCCCEEEEEECCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
DFVVGAWVFTYLAAPEWFVSNFTPGIMLTVIIITPLLHLTTNIIGYFIGVKKEPW
HHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
>Mature Secondary Structure
MIPAYLSNPFAAVFGGGKPIDGGRTYKDGRRILGDGKTYRGLFSGIFCGFLAGCVEVWLS
CCCCCCCCCHHEEECCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
FRGFEILGIEMPGFGPDYTSSLIVVLALASGALFGDMFKSFFKRRMGLKRGASLPLVDQL
HCCCEEEEEECCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
DFVVGAWVFTYLAAPEWFVSNFTPGIMLTVIIITPLLHLTTNIIGYFIGVKKEPW
HHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12125824