Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226243
Identifier: 21226243
GI number: 21226243
Start: 176529
End: 177056
Strand: Direct
Name: 21226243
Synonym: MM_0141
Alternate gene names: NA
Gene position: 176529-177056 (Clockwise)
Preceding gene: 21226239
Following gene: 21226244
Centisome position: 4.31
GC content: 47.73
Gene sequence:
>528_bases ATGATCCCTGCTTACCTTTCCAATCCCTTCGCAGCTGTTTTCGGGGGCGGAAAACCGATTGATGGAGGCAGGACATATAA AGACGGGAGAAGGATCCTCGGAGACGGAAAGACATATAGAGGGCTCTTTTCAGGCATATTTTGCGGGTTTCTTGCAGGCT GTGTTGAGGTATGGCTGAGTTTCAGAGGGTTTGAGATACTGGGAATCGAAATGCCCGGATTCGGCCCGGATTATACAAGT TCGTTGATAGTTGTGCTTGCCCTTGCTTCAGGTGCGCTTTTCGGGGACATGTTCAAGAGCTTTTTCAAACGCAGGATGGG ACTGAAAAGGGGAGCGTCACTGCCTCTCGTGGACCAGCTTGACTTTGTGGTCGGAGCCTGGGTATTTACATACCTTGCTG CCCCGGAGTGGTTCGTGAGTAATTTTACTCCGGGAATCATGCTTACAGTTATTATAATAACGCCTCTACTACATCTTACG ACAAACATAATCGGATATTTTATAGGTGTAAAGAAAGAACCGTGGTGA
Upstream 100 bases:
>100_bases ATAAGGGTGTGGGAAGGATTAACTTCTGCCCCGGAAAAAAGTAACAAGGAATTAAAGAGATGATACCACGATAGAGCTGA TAATCAAAGCGTTCTGGCTG
Downstream 100 bases:
>100_bases AAATTTCCGGGGAATTTAATAATATCCTTACAGGAAAAATCTAAGAAAACACATATAGCATTAATAAGGCTGCAAATACC GGTGAGAAAATGAGCAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MIPAYLSNPFAAVFGGGKPIDGGRTYKDGRRILGDGKTYRGLFSGIFCGFLAGCVEVWLSFRGFEILGIEMPGFGPDYTS SLIVVLALASGALFGDMFKSFFKRRMGLKRGASLPLVDQLDFVVGAWVFTYLAAPEWFVSNFTPGIMLTVIIITPLLHLT TNIIGYFIGVKKEPW
Sequences:
>Translated_175_residues MIPAYLSNPFAAVFGGGKPIDGGRTYKDGRRILGDGKTYRGLFSGIFCGFLAGCVEVWLSFRGFEILGIEMPGFGPDYTS SLIVVLALASGALFGDMFKSFFKRRMGLKRGASLPLVDQLDFVVGAWVFTYLAAPEWFVSNFTPGIMLTVIIITPLLHLT TNIIGYFIGVKKEPW >Mature_175_residues MIPAYLSNPFAAVFGGGKPIDGGRTYKDGRRILGDGKTYRGLFSGIFCGFLAGCVEVWLSFRGFEILGIEMPGFGPDYTS SLIVVLALASGALFGDMFKSFFKRRMGLKRGASLPLVDQLDFVVGAWVFTYLAAPEWFVSNFTPGIMLTVIIITPLLHLT TNIIGYFIGVKKEPW
Specific function: Unknown
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0290 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y141_METMA (Q8Q0J5)
Other databases:
- EMBL: AE008384 - RefSeq: NP_632165.1 - GeneID: 1478483 - GenomeReviews: AE008384_GR - KEGG: mma:MM_0141 - NMPDR: fig|192952.1.peg.141 - HOGENOM: HBG297562 - OMA: GKTWRGT - ProtClustDB: PRK04032 - BioCyc: MMAZ192952:MM0141-MONOMER - HAMAP: MF_01117 - InterPro: IPR002726
Pfam domain/function: PF01864 DUF46
EC number: NA
Molecular weight: Translated: 19180; Mature: 19180
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x91f9ed4)-; HASH(0xaf4e56c)-; HASH(0xb08df88)-; HASH(0xbaaab60)-;
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPAYLSNPFAAVFGGGKPIDGGRTYKDGRRILGDGKTYRGLFSGIFCGFLAGCVEVWLS CCCCCCCCCHHEEECCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH FRGFEILGIEMPGFGPDYTSSLIVVLALASGALFGDMFKSFFKRRMGLKRGASLPLVDQL HCCCEEEEEECCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH DFVVGAWVFTYLAAPEWFVSNFTPGIMLTVIIITPLLHLTTNIIGYFIGVKKEPW HHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH >Mature Secondary Structure MIPAYLSNPFAAVFGGGKPIDGGRTYKDGRRILGDGKTYRGLFSGIFCGFLAGCVEVWLS CCCCCCCCCHHEEECCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH FRGFEILGIEMPGFGPDYTSSLIVVLALASGALFGDMFKSFFKRRMGLKRGASLPLVDQL HCCCEEEEEECCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH DFVVGAWVFTYLAAPEWFVSNFTPGIMLTVIIITPLLHLTTNIIGYFIGVKKEPW HHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12125824