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The map label for this gene is yxaC [H]

Identifier: 21226209

GI number: 21226209

Start: 134330

End: 135046

Strand: Reverse

Name: yxaC [H]

Synonym: MM_0107

Alternate gene names: 21226209

Gene position: 135046-134330 (Counterclockwise)

Preceding gene: 21226210

Following gene: 21226207

Centisome position: 3.3

GC content: 46.72

Gene sequence:

>717_bases
GTGCAGGCCGATTTTTTGAATGAATTTCTAGGCACGCCTCTTTTTGGGATTCTTCTTTCCCTTGCTGCTTTTCAGGCAGG
CAGCCTGCTCTATAAGAAAACCCGTTTTTCCGTCTTCAATCCTCTCCTTGTGGGCATTGTGCTTGTGATTCTCGTCCTTC
TTTACTTCAGGATAGATTTTGAAACCTATAATGTAGGTGGAGATTACATTTCGTTCTTTCTCGGACCTGCAACTGTAGTC
CTTGCCGTTCCCCTCTACAAAAAAATCCAGCTCCTGAAAAATGACGCCGTGCCTATAATTGCAGGCATAAGTGCAGGCTG
CATTGCGGGCATTTCAAGCATTTTGATCTTCTCAAGTCTTTTGGGACTTGATAATGTCATAACCAGTTCTCTTGTTCCCA
AGTCCGTAACCACGCCCATAGGTATAGAGATTTCAAAACAGATAGGTGGCATGCCTGCAATAACAGTGGCTGCAATTTCG
ATAACCGGAATTATAGGAGCTGTACTGGGTCCGTTCATCTGCCGCTCTTTCCGGATAAAAGATAGCGTTGCAGTCGGGAT
CGCGATCGGGACTTCTTCTCATGCTCTCGGGACAACCAGGGCAATAGAGCTTGGAGAAACCGAAGGAGCAATGAGCGGAC
TTGCAATAGGAATCGCCGGGCTAATTACGGTTTTTCTGGCGCCTGCGCTTCTTTACGTGTTCGGGGTTCTTCCATAA

Upstream 100 bases:

>100_bases
GGATTGACAGTTGAATTTGTCAAAAAGTTAAGTGGAAAAGAGGTCATGGTGCATAAAAAAGCGAAGTCATCCGACAGGAA
GACAGAAGAGGTGACCTGAA

Downstream 100 bases:

>100_bases
TGATTGTTCTGAAACTATAGGACGATCCCTGATTCTGTCCTGAAACGTCTCCGCATGGTCTGATTACCGGTATGTTACAT
ACCCGAAATACTGTCATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MQADFLNEFLGTPLFGILLSLAAFQAGSLLYKKTRFSVFNPLLVGIVLVILVLLYFRIDFETYNVGGDYISFFLGPATVV
LAVPLYKKIQLLKNDAVPIIAGISAGCIAGISSILIFSSLLGLDNVITSSLVPKSVTTPIGIEISKQIGGMPAITVAAIS
ITGIIGAVLGPFICRSFRIKDSVAVGIAIGTSSHALGTTRAIELGETEGAMSGLAIGIAGLITVFLAPALLYVFGVLP

Sequences:

>Translated_238_residues
MQADFLNEFLGTPLFGILLSLAAFQAGSLLYKKTRFSVFNPLLVGIVLVILVLLYFRIDFETYNVGGDYISFFLGPATVV
LAVPLYKKIQLLKNDAVPIIAGISAGCIAGISSILIFSSLLGLDNVITSSLVPKSVTTPIGIEISKQIGGMPAITVAAIS
ITGIIGAVLGPFICRSFRIKDSVAVGIAIGTSSHALGTTRAIELGETEGAMSGLAIGIAGLITVFLAPALLYVFGVLP
>Mature_238_residues
MQADFLNEFLGTPLFGILLSLAAFQAGSLLYKKTRFSVFNPLLVGIVLVILVLLYFRIDFETYNVGGDYISFFLGPATVV
LAVPLYKKIQLLKNDAVPIIAGISAGCIAGISSILIFSSLLGLDNVITSSLVPKSVTTPIGIEISKQIGGMPAITVAAIS
ITGIIGAVLGPFICRSFRIKDSVAVGIAIGTSSHALGTTRAIELGETEGAMSGLAIGIAGLITVFLAPALLYVFGVLP

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=216, Percent_Identity=37.5, Blast_Score=138, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 24778; Mature: 24778

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: PS01108 RIBOSOMAL_L24

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQADFLNEFLGTPLFGILLSLAAFQAGSLLYKKTRFSVFNPLLVGIVLVILVLLYFRIDF
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ETYNVGGDYISFFLGPATVVLAVPLYKKIQLLKNDAVPIIAGISAGCIAGISSILIFSSL
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHH
LGLDNVITSSLVPKSVTTPIGIEISKQIGGMPAITVAAISITGIIGAVLGPFICRSFRIK
HHHHHHHHHHCCCCCCCCCCCEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DSVAVGIAIGTSSHALGTTRAIELGETEGAMSGLAIGIAGLITVFLAPALLYVFGVLP
CCEEEEEEECCCCCCCCCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQADFLNEFLGTPLFGILLSLAAFQAGSLLYKKTRFSVFNPLLVGIVLVILVLLYFRIDF
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ETYNVGGDYISFFLGPATVVLAVPLYKKIQLLKNDAVPIIAGISAGCIAGISSILIFSSL
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHH
LGLDNVITSSLVPKSVTTPIGIEISKQIGGMPAITVAAISITGIIGAVLGPFICRSFRIK
HHHHHHHHHHCCCCCCCCCCCEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DSVAVGIAIGTSSHALGTTRAIELGETEGAMSGLAIGIAGLITVFLAPALLYVFGVLP
CCEEEEEEECCCCCCCCCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584049; 9384377; 10568751 [H]