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The map label for this gene is otaC [H]

Identifier: 21226144

GI number: 21226144

Start: 53778

End: 54698

Strand: Direct

Name: otaC [H]

Synonym: MM_0042

Alternate gene names: 21226144

Gene position: 53778-54698 (Clockwise)

Preceding gene: 21226143

Following gene: 21226146

Centisome position: 1.31

GC content: 47.45

Gene sequence:

>921_bases
GTGAAATTAAATAAGAAAAAACTGAAATCATTATTTATAGTCGGGCTTGTACTTGGCCTCTTTATTTTCGGGGCAGGCTG
TGCGGACGATACACAGGAAGGCACTGAAGAAACAGCAGATGCTGCTGAATACAATCAGCCAGTGGAAATCGGGTACGTCC
TCTGGGACGGAGAAATTGCCAGTACCAACGTGATCCAGCAGGTTCTCCAGCAGGCAGGGTATACTGATGTGGAGATAATT
GCAGTGGATGCGGGACCCCTTTATCAGGGTGTGGCTTCCGGAGAATTCGATTTCACAACATCAGCATGGCTTCCCCAGAC
CCAGGCGAACTACTGGGAAACATACGGAGACAGGATTGACTCTGTCAGGGTGAACCTGGAAGATTGCACAATCGGGCTTG
CTGTCCCGACTTATGTAGAAGAGGTCAATTCCATTGAAGACCTGAATGATAATAAAGAAATGTTTAATGGAGAAATCATC
GGCATCGACCCGGGAGCTGGAGTCATGCAGATTACCGAAGATGTAATCGAAGCGTATGACCTTGACTACACTCTCGTCTC
TAGCAGCAGTGCAGGCATGACCGCAGCTCTGCAAAGAGCCATAAATAACGAAGAGCCTGTTGTTGTGACGCTCTGGTCCC
CTCACTGGGCTTTTAACCGCTGGGACCTCAAGTACCTTGACGACCCCCAGGGATATTACGGAGAAGCAGATAATGTTGAG
ACTCTTGCAAGGCAGGGCCTCGAAGAAGATATGCCTAACCTTTATGGTATCCTTGAAAGATTTGCCTGGACCCACGAGGA
TATTCAGTCTGTTATGGTAGATATTGAAAGTGGAATGGCTCCTGAAGAAGCTGCAGCAAAATGGGTCGAGAACAATCCGG
AAAAAGTCAATGAATGGATAGGAGAAGAAGTAGAAGAGTAA

Upstream 100 bases:

>100_bases
AATTTTATATTAGACACAACAACGGCCAGATTATAACCATAATAAATTGATTGTGTTGTGGAACTGGTTGTGTCATATTG
AACAATGCAAAGGTGAAAAG

Downstream 100 bases:

>100_bases
AATTCCCTTCTTCCTATTTTTTTACCTGATTTATAATTTCTATGGTTCTTTATTCATTTCTATTTCTACAATTCAATTTT
TGAAAATGACCGACTTACCT

Product: glycine betaine transporter, substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MKLNKKKLKSLFIVGLVLGLFIFGAGCADDTQEGTEETADAAEYNQPVEIGYVLWDGEIASTNVIQQVLQQAGYTDVEII
AVDAGPLYQGVASGEFDFTTSAWLPQTQANYWETYGDRIDSVRVNLEDCTIGLAVPTYVEEVNSIEDLNDNKEMFNGEII
GIDPGAGVMQITEDVIEAYDLDYTLVSSSSAGMTAALQRAINNEEPVVVTLWSPHWAFNRWDLKYLDDPQGYYGEADNVE
TLARQGLEEDMPNLYGILERFAWTHEDIQSVMVDIESGMAPEEAAAKWVENNPEKVNEWIGEEVEE

Sequences:

>Translated_306_residues
MKLNKKKLKSLFIVGLVLGLFIFGAGCADDTQEGTEETADAAEYNQPVEIGYVLWDGEIASTNVIQQVLQQAGYTDVEII
AVDAGPLYQGVASGEFDFTTSAWLPQTQANYWETYGDRIDSVRVNLEDCTIGLAVPTYVEEVNSIEDLNDNKEMFNGEII
GIDPGAGVMQITEDVIEAYDLDYTLVSSSSAGMTAALQRAINNEEPVVVTLWSPHWAFNRWDLKYLDDPQGYYGEADNVE
TLARQGLEEDMPNLYGILERFAWTHEDIQSVMVDIESGMAPEEAAAKWVENNPEKVNEWIGEEVEE
>Mature_306_residues
MKLNKKKLKSLFIVGLVLGLFIFGAGCADDTQEGTEETADAAEYNQPVEIGYVLWDGEIASTNVIQQVLQQAGYTDVEII
AVDAGPLYQGVASGEFDFTTSAWLPQTQANYWETYGDRIDSVRVNLEDCTIGLAVPTYVEEVNSIEDLNDNKEMFNGEII
GIDPGAGVMQITEDVIEAYDLDYTLVSSSSAGMTAALQRAINNEEPVVVTLWSPHWAFNRWDLKYLDDPQGYYGEADNVE
TLARQGLEEDMPNLYGILERFAWTHEDIQSVMVDIESGMAPEEAAAKWVENNPEKVNEWIGEEVEE

Specific function: Involved in a multicomponent binding-protein-dependent transport system for glycine betaine [H]

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 34033; Mature: 34033

Theoretical pI: Translated: 3.65; Mature: 3.65

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNKKKLKSLFIVGLVLGLFIFGAGCADDTQEGTEETADAAEYNQPVEIGYVLWDGEIA
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCC
STNVIQQVLQQAGYTDVEIIAVDAGPLYQGVASGEFDFTTSAWLPQTQANYWETYGDRID
HHHHHHHHHHHCCCCCEEEEEECCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHH
SVRVNLEDCTIGLAVPTYVEEVNSIEDLNDNKEMFNGEIIGIDPGAGVMQITEDVIEAYD
HEEEEHHHCEEEEEHHHHHHHHHHHHCCCCCHHHHCCEEEEECCCCCHHHHHHHHHHHHC
LDYTLVSSSSAGMTAALQRAINNEEPVVVTLWSPHWAFNRWDLKYLDDPQGYYGEADNVE
CCEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEECCCCCCCCCCCCCHH
TLARQGLEEDMPNLYGILERFAWTHEDIQSVMVDIESGMAPEEAAAKWVENNPEKVNEWI
HHHHCCHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHH
GEEVEE
HHHCCC
>Mature Secondary Structure
MKLNKKKLKSLFIVGLVLGLFIFGAGCADDTQEGTEETADAAEYNQPVEIGYVLWDGEIA
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCC
STNVIQQVLQQAGYTDVEIIAVDAGPLYQGVASGEFDFTTSAWLPQTQANYWETYGDRID
HHHHHHHHHHHCCCCCEEEEEECCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHH
SVRVNLEDCTIGLAVPTYVEEVNSIEDLNDNKEMFNGEIIGIDPGAGVMQITEDVIEAYD
HEEEEHHHCEEEEEHHHHHHHHHHHHCCCCCHHHHCCEEEEECCCCCHHHHHHHHHHHHC
LDYTLVSSSSAGMTAALQRAINNEEPVVVTLWSPHWAFNRWDLKYLDDPQGYYGEADNVE
CCEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEECCCCCCCCCCCCCHH
TLARQGLEEDMPNLYGILERFAWTHEDIQSVMVDIESGMAPEEAAAKWVENNPEKVNEWI
HHHHCCHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHH
GEEVEE
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7622480; 8969502; 9384377 [H]