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The map label for this gene is ybaA [H]

Identifier: 21226114

GI number: 21226114

Start: 14436

End: 14801

Strand: Direct

Name: ybaA [H]

Synonym: MM_0012

Alternate gene names: 21226114

Gene position: 14436-14801 (Clockwise)

Preceding gene: 21226113

Following gene: 21226115

Centisome position: 0.35

GC content: 37.98

Gene sequence:

>366_bases
ATGGAAAAGTACGTGGACGGATTTTTGATTCCTATCGCTAAAGACAAGGTAAACAAATACAGAGAAATTGCCCAAAAATC
AAGTCAGATATGGAAAGATCTTGGCGCTTTAGAGTATTACGAATGTATAGGGGACGACCTGGACATAGAAGAACTGGTTT
CTTTTAAAAAAGTAGTTAATGCCTCTGAAGAAGAAACCGTAATTTTCTCATGGATTGTCTACGAATCAAAAGAGCAGAGA
GACAAAGTAAATGAAGCAGTTATGAATGACCCGAGAATGAAAGAAATGATGGAAACCAGCGAATATGATCTGTTTGATTA
CAGGCGCATGTCATATGGGGGGTTCAAAACACTGGTGAGTCTTTAA

Upstream 100 bases:

>100_bases
TATCAGGGACAAACTGTGCCTCCTGATACAGATTTCCATGAAGCTCAAAATAAGAAAAAATTCAGAATAAGAGATACAAA
AGTAAAAGGAGAGAAAAAAT

Downstream 100 bases:

>100_bases
CCTGACACATTGTTGCAGCCTGCCTCAGTATTTCGGTGGCTTTTTAAAGAATTAAAAAAGGCTGAAGAAAATAGATAACT
GTCAGATATAAAGGGGATTT

Product: RNA signal recognition particle 4.5S RNA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MEKYVDGFLIPIAKDKVNKYREIAQKSSQIWKDLGALEYYECIGDDLDIEELVSFKKVVNASEEETVIFSWIVYESKEQR
DKVNEAVMNDPRMKEMMETSEYDLFDYRRMSYGGFKTLVSL

Sequences:

>Translated_121_residues
MEKYVDGFLIPIAKDKVNKYREIAQKSSQIWKDLGALEYYECIGDDLDIEELVSFKKVVNASEEETVIFSWIVYESKEQR
DKVNEAVMNDPRMKEMMETSEYDLFDYRRMSYGGFKTLVSL
>Mature_121_residues
MEKYVDGFLIPIAKDKVNKYREIAQKSSQIWKDLGALEYYECIGDDLDIEELVSFKKVVNASEEETVIFSWIVYESKEQR
DKVNEAVMNDPRMKEMMETSEYDLFDYRRMSYGGFKTLVSL

Specific function: Unknown

COG id: COG5507

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786661, Length=117, Percent_Identity=45.2991452991453, Blast_Score=110, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009874 [H]

Pfam domain/function: PF07237 DUF1428 [H]

EC number: NA

Molecular weight: Translated: 14293; Mature: 14293

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKYVDGFLIPIAKDKVNKYREIAQKSSQIWKDLGALEYYECIGDDLDIEELVSFKKVVN
CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC
ASEEETVIFSWIVYESKEQRDKVNEAVMNDPRMKEMMETSEYDLFDYRRMSYGGFKTLVS
CCCCCEEEEHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHCCCHHHHHHC
L
C
>Mature Secondary Structure
MEKYVDGFLIPIAKDKVNKYREIAQKSSQIWKDLGALEYYECIGDDLDIEELVSFKKVVN
CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC
ASEEETVIFSWIVYESKEQRDKVNEAVMNDPRMKEMMETSEYDLFDYRRMSYGGFKTLVS
CCCCCEEEEHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHCCCHHHHHHC
L
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]