Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226113
Identifier: 21226113
GI number: 21226113
Start: 12748
End: 13155
Strand: Direct
Name: 21226113
Synonym: MM_0011
Alternate gene names: NA
Gene position: 12748-13155 (Clockwise)
Preceding gene: 21226109
Following gene: 21226114
Centisome position: 0.31
GC content: 43.14
Gene sequence:
>408_bases ATGAGAATAAGAGTTGTCAGTTCAAGGGAAGAAATTTTTACACTTAATCCGAATGAGCGTATTGTTCACCTGGCTTTCAG GCCGTCTAACAAGGACATCTTCGGACTGGTTGAAACCTGCCCGAAGATTGAGGTTATCCAGTTACCCAAATCATACATGC GTACAGTTTCAAGGTCCATAGAGATGTTCCTTCAGATGCAGAGAGTCCAGCTCCTTGAGGGAGATGTGTGGGGACACAGG AAAGATATAAACGAATATTACGAAATTCCGTCCTCAGTGATCGAGAAAATAAAAGAAATGAAGAACGAAGGAAAAACCGC AGAGGAAATTGAGAAAAAGGTTGCAAGGGAAAGCAAGCTTAACCCGGGAATGGTAGGCTATATCCTGAACAAGGAAGCTT CTGCCTGA
Upstream 100 bases:
>100_bases ATTAGATACAAAAATCAACCTAAAAGAAAATAACCTAAAAGAAAATCAACTTAAAAGATTAACTTTAATCAAGAAATAAC TTTAGAGTGGGGGAAAAAAT
Downstream 100 bases:
>100_bases ATACAATGCATGATAAAAAAGCTGGTGGGTGTTTTTAGGAGATCAGGTAAGACAGAAATGGGAAAATCTGTTATTATCCA ATCTCCTTCTTAAATCATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MRIRVVSSREEIFTLNPNERIVHLAFRPSNKDIFGLVETCPKIEVIQLPKSYMRTVSRSIEMFLQMQRVQLLEGDVWGHR KDINEYYEIPSSVIEKIKEMKNEGKTAEEIEKKVARESKLNPGMVGYILNKEASA
Sequences:
>Translated_135_residues MRIRVVSSREEIFTLNPNERIVHLAFRPSNKDIFGLVETCPKIEVIQLPKSYMRTVSRSIEMFLQMQRVQLLEGDVWGHR KDINEYYEIPSSVIEKIKEMKNEGKTAEEIEKKVARESKLNPGMVGYILNKEASA >Mature_135_residues MRIRVVSSREEIFTLNPNERIVHLAFRPSNKDIFGLVETCPKIEVIQLPKSYMRTVSRSIEMFLQMQRVQLLEGDVWGHR KDINEYYEIPSSVIEKIKEMKNEGKTAEEIEKKVARESKLNPGMVGYILNKEASA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15697; Mature: 15697
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIRVVSSREEIFTLNPNERIVHLAFRPSNKDIFGLVETCPKIEVIQLPKSYMRTVSRSI CEEEEECCCCCEEEECCCCEEEEEEECCCCCCCHHHHHCCCCCEEEECCHHHHHHHHHHH EMFLQMQRVQLLEGDVWGHRKDINEYYEIPSSVIEKIKEMKNEGKTAEEIEKKVARESKL HHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC NPGMVGYILNKEASA CCCEEEEEECCCCCC >Mature Secondary Structure MRIRVVSSREEIFTLNPNERIVHLAFRPSNKDIFGLVETCPKIEVIQLPKSYMRTVSRSI CEEEEECCCCCEEEECCCCEEEEEEECCCCCCCHHHHHCCCCCEEEECCHHHHHHHHHHH EMFLQMQRVQLLEGDVWGHRKDINEYYEIPSSVIEKIKEMKNEGKTAEEIEKKVARESKL HHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC NPGMVGYILNKEASA CCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA