Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21226105

Identifier: 21226105

GI number: 21226105

Start: 4334

End: 4546

Strand: Direct

Name: 21226105

Synonym: MM_0003

Alternate gene names: NA

Gene position: 4334-4546 (Clockwise)

Preceding gene: 21226104

Following gene: 21226106

Centisome position: 0.11

GC content: 32.39

Gene sequence:

>213_bases
ATGCTGATTAAAGTGAGAGATTCTGCCACTTTAATAAACTGCGCTTTGAATCCCCTTTTTATTTGGCATGAAAGTGCTTT
CAAGTACTTTCATTTTTTGGGCATGTTATTCGAAGAATATCATGTGTGTTTTTTATTTACAGCCATAACTGAGAGTACAA
ATGTAAGATACCTGGAGAATCTATTTCAACCTTTGGATAAGAATATTAATTGA

Upstream 100 bases:

>100_bases
AATATCTACGAGTGGACAAGGACAAGTGCAACCGATACAGCTCAGAAATGAGTTATACTAAAAAAAGAGTAATGGTTCAA
AGCGAATGACGATTAAATAA

Downstream 100 bases:

>100_bases
AATAATAACAAATATTGCAATAATCCTGAAGTAAGTTTATTATCAAGTAACAATAATGAGGGAAGAGTGTGCCGGATACC
GAAAAAATAGCGAGTTTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 70; Mature: 70

Protein sequence:

>70_residues
MLIKVRDSATLINCALNPLFIWHESAFKYFHFLGMLFEEYHVCFLFTAITESTNVRYLENLFQPLDKNIN

Sequences:

>Translated_70_residues
MLIKVRDSATLINCALNPLFIWHESAFKYFHFLGMLFEEYHVCFLFTAITESTNVRYLENLFQPLDKNIN
>Mature_70_residues
MLIKVRDSATLINCALNPLFIWHESAFKYFHFLGMLFEEYHVCFLFTAITESTNVRYLENLFQPLDKNIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8333; Mature: 8333

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIKVRDSATLINCALNPLFIWHESAFKYFHFLGMLFEEYHVCFLFTAITESTNVRYLEN
CEEEECCCCEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LFQPLDKNIN
HHHHHCCCCC
>Mature Secondary Structure
MLIKVRDSATLINCALNPLFIWHESAFKYFHFLGMLFEEYHVCFLFTAITESTNVRYLEN
CEEEECCCCEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LFQPLDKNIN
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA