Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212224560

Identifier: 212224560

GI number: 212224560

Start: 1285390

End: 1286136

Strand: Reverse

Name: 212224560

Synonym: TON_1409

Alternate gene names: NA

Gene position: 1286136-1285390 (Counterclockwise)

Preceding gene: 212224564

Following gene: 212224559

Centisome position: 69.61

GC content: 53.28

Gene sequence:

>747_bases
ATGAACGTTGACGAACTGAGGGCCAGGCTGTCCCGTCTCGAGGAGCTCCACGCTCAATTTGAGCATCAGTTTCCTGGCAT
CTACGAGGAGAAGGACTATGAGGCTCTTCTTGCAAGGATCAAGGGACTTTACATGCTCTCCAGAGAGAAGCTTGAGATAG
CCTCTGTTCTCTACCGGGAGATGGCCCAGATTGGTGGAAGAGCTGAGGAACTTGCCAAGGAGCTCCACAGGAACGAGCAC
CAGATGAAGTTCCGCCTTGAGGAGATCCTGTCTCTGCTGGCGAAAGCAACCGACTATGACGCTCGGCTACGGCTGAACAC
TGCTCTTGACAGACTTGTTCATTTCCACCGGGTTTACGATTACGCTGTGAGCAGGGCAATTCAAGAACTTGCCACTGAGG
TTGAGGGACTCACCCTTCTGGCCGAGGGCGAAAAGGAGAAAAAGGTACCCGTGAGTATAATGGACAAGCTCCGGAAGATT
GAAGAGCTTGAGGCTGAGCTTGAGGTTGTGAAAACCTTCATGCTCAGGCTTTACTCTCACCCTGGCGACGTTCACAAGGT
TGAGGAGGCCCTAAAGGACTGGCATTCAAGGGGCCTGTTGTGGGTCGAGGCGAGGAACGTGGAGAAGCTCAGCGGCGTTG
GGAGAGCCGGCGAGATACTCGAAGGTCTGACGCTCATAGGAGTGGTGGAAAAGAAAATGAGGGGTGGTGAAAGTGTCTAC
AGACACAGGAGTTTCAGTTCGGGTTAG

Upstream 100 bases:

>100_bases
GGCTTAAAAAAAGGTTTGGGTAAGTGATTCTGTTTACCCAACGATTATCGAAAACTACAAGTAGGGGGAGAAATCTAGAT
AACCCTCAGGGGGTTTTCGC

Downstream 100 bases:

>100_bases
GGGCATCTACAGCACGGCCCTCACGAAGCTCTTCCTCGACAGGGGCTTTGGCATCTCCCAGCCGAGCCAGAAGATCGTCG
AGCGCTTCAACCTCGAAAAG

Product: protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MNVDELRARLSRLEELHAQFEHQFPGIYEEKDYEALLARIKGLYMLSREKLEIASVLYREMAQIGGRAEELAKELHRNEH
QMKFRLEEILSLLAKATDYDARLRLNTALDRLVHFHRVYDYAVSRAIQELATEVEGLTLLAEGEKEKKVPVSIMDKLRKI
EELEAELEVVKTFMLRLYSHPGDVHKVEEALKDWHSRGLLWVEARNVEKLSGVGRAGEILEGLTLIGVVEKKMRGGESVY
RHRSFSSG

Sequences:

>Translated_248_residues
MNVDELRARLSRLEELHAQFEHQFPGIYEEKDYEALLARIKGLYMLSREKLEIASVLYREMAQIGGRAEELAKELHRNEH
QMKFRLEEILSLLAKATDYDARLRLNTALDRLVHFHRVYDYAVSRAIQELATEVEGLTLLAEGEKEKKVPVSIMDKLRKI
EELEAELEVVKTFMLRLYSHPGDVHKVEEALKDWHSRGLLWVEARNVEKLSGVGRAGEILEGLTLIGVVEKKMRGGESVY
RHRSFSSG
>Mature_248_residues
MNVDELRARLSRLEELHAQFEHQFPGIYEEKDYEALLARIKGLYMLSREKLEIASVLYREMAQIGGRAEELAKELHRNEH
QMKFRLEEILSLLAKATDYDARLRLNTALDRLVHFHRVYDYAVSRAIQELATEVEGLTLLAEGEKEKKVPVSIMDKLRKI
EELEAELEVVKTFMLRLYSHPGDVHKVEEALKDWHSRGLLWVEARNVEKLSGVGRAGEILEGLTLIGVVEKKMRGGESVY
RHRSFSSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28653; Mature: 28653

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVDELRARLSRLEELHAQFEHQFPGIYEEKDYEALLARIKGLYMLSREKLEIASVLYRE
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAQIGGRAEELAKELHRNEHQMKFRLEEILSLLAKATDYDARLRLNTALDRLVHFHRVYD
HHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
YAVSRAIQELATEVEGLTLLAEGEKEKKVPVSIMDKLRKIEELEAELEVVKTFMLRLYSH
HHHHHHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PGDVHKVEEALKDWHSRGLLWVEARNVEKLSGVGRAGEILEGLTLIGVVEKKMRGGESVY
CCHHHHHHHHHHHHHHCCEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHH
RHRSFSSG
HHCCCCCC
>Mature Secondary Structure
MNVDELRARLSRLEELHAQFEHQFPGIYEEKDYEALLARIKGLYMLSREKLEIASVLYRE
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAQIGGRAEELAKELHRNEHQMKFRLEEILSLLAKATDYDARLRLNTALDRLVHFHRVYD
HHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
YAVSRAIQELATEVEGLTLLAEGEKEKKVPVSIMDKLRKIEELEAELEVVKTFMLRLYSH
HHHHHHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PGDVHKVEEALKDWHSRGLLWVEARNVEKLSGVGRAGEILEGLTLIGVVEKKMRGGESVY
CCHHHHHHHHHHHHHHCCEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHH
RHRSFSSG
HHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA