Definition | Thermococcus onnurineus NA1, complete genome. |
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Accession | NC_011529 |
Length | 1,847,607 |
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The map label for this gene is 212224560
Identifier: 212224560
GI number: 212224560
Start: 1285390
End: 1286136
Strand: Reverse
Name: 212224560
Synonym: TON_1409
Alternate gene names: NA
Gene position: 1286136-1285390 (Counterclockwise)
Preceding gene: 212224564
Following gene: 212224559
Centisome position: 69.61
GC content: 53.28
Gene sequence:
>747_bases ATGAACGTTGACGAACTGAGGGCCAGGCTGTCCCGTCTCGAGGAGCTCCACGCTCAATTTGAGCATCAGTTTCCTGGCAT CTACGAGGAGAAGGACTATGAGGCTCTTCTTGCAAGGATCAAGGGACTTTACATGCTCTCCAGAGAGAAGCTTGAGATAG CCTCTGTTCTCTACCGGGAGATGGCCCAGATTGGTGGAAGAGCTGAGGAACTTGCCAAGGAGCTCCACAGGAACGAGCAC CAGATGAAGTTCCGCCTTGAGGAGATCCTGTCTCTGCTGGCGAAAGCAACCGACTATGACGCTCGGCTACGGCTGAACAC TGCTCTTGACAGACTTGTTCATTTCCACCGGGTTTACGATTACGCTGTGAGCAGGGCAATTCAAGAACTTGCCACTGAGG TTGAGGGACTCACCCTTCTGGCCGAGGGCGAAAAGGAGAAAAAGGTACCCGTGAGTATAATGGACAAGCTCCGGAAGATT GAAGAGCTTGAGGCTGAGCTTGAGGTTGTGAAAACCTTCATGCTCAGGCTTTACTCTCACCCTGGCGACGTTCACAAGGT TGAGGAGGCCCTAAAGGACTGGCATTCAAGGGGCCTGTTGTGGGTCGAGGCGAGGAACGTGGAGAAGCTCAGCGGCGTTG GGAGAGCCGGCGAGATACTCGAAGGTCTGACGCTCATAGGAGTGGTGGAAAAGAAAATGAGGGGTGGTGAAAGTGTCTAC AGACACAGGAGTTTCAGTTCGGGTTAG
Upstream 100 bases:
>100_bases GGCTTAAAAAAAGGTTTGGGTAAGTGATTCTGTTTACCCAACGATTATCGAAAACTACAAGTAGGGGGAGAAATCTAGAT AACCCTCAGGGGGTTTTCGC
Downstream 100 bases:
>100_bases GGGCATCTACAGCACGGCCCTCACGAAGCTCTTCCTCGACAGGGGCTTTGGCATCTCCCAGCCGAGCCAGAAGATCGTCG AGCGCTTCAACCTCGAAAAG
Product: protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MNVDELRARLSRLEELHAQFEHQFPGIYEEKDYEALLARIKGLYMLSREKLEIASVLYREMAQIGGRAEELAKELHRNEH QMKFRLEEILSLLAKATDYDARLRLNTALDRLVHFHRVYDYAVSRAIQELATEVEGLTLLAEGEKEKKVPVSIMDKLRKI EELEAELEVVKTFMLRLYSHPGDVHKVEEALKDWHSRGLLWVEARNVEKLSGVGRAGEILEGLTLIGVVEKKMRGGESVY RHRSFSSG
Sequences:
>Translated_248_residues MNVDELRARLSRLEELHAQFEHQFPGIYEEKDYEALLARIKGLYMLSREKLEIASVLYREMAQIGGRAEELAKELHRNEH QMKFRLEEILSLLAKATDYDARLRLNTALDRLVHFHRVYDYAVSRAIQELATEVEGLTLLAEGEKEKKVPVSIMDKLRKI EELEAELEVVKTFMLRLYSHPGDVHKVEEALKDWHSRGLLWVEARNVEKLSGVGRAGEILEGLTLIGVVEKKMRGGESVY RHRSFSSG >Mature_248_residues MNVDELRARLSRLEELHAQFEHQFPGIYEEKDYEALLARIKGLYMLSREKLEIASVLYREMAQIGGRAEELAKELHRNEH QMKFRLEEILSLLAKATDYDARLRLNTALDRLVHFHRVYDYAVSRAIQELATEVEGLTLLAEGEKEKKVPVSIMDKLRKI EELEAELEVVKTFMLRLYSHPGDVHKVEEALKDWHSRGLLWVEARNVEKLSGVGRAGEILEGLTLIGVVEKKMRGGESVY RHRSFSSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28653; Mature: 28653
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVDELRARLSRLEELHAQFEHQFPGIYEEKDYEALLARIKGLYMLSREKLEIASVLYRE CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAQIGGRAEELAKELHRNEHQMKFRLEEILSLLAKATDYDARLRLNTALDRLVHFHRVYD HHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH YAVSRAIQELATEVEGLTLLAEGEKEKKVPVSIMDKLRKIEELEAELEVVKTFMLRLYSH HHHHHHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PGDVHKVEEALKDWHSRGLLWVEARNVEKLSGVGRAGEILEGLTLIGVVEKKMRGGESVY CCHHHHHHHHHHHHHHCCEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHH RHRSFSSG HHCCCCCC >Mature Secondary Structure MNVDELRARLSRLEELHAQFEHQFPGIYEEKDYEALLARIKGLYMLSREKLEIASVLYRE CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAQIGGRAEELAKELHRNEHQMKFRLEEILSLLAKATDYDARLRLNTALDRLVHFHRVYD HHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH YAVSRAIQELATEVEGLTLLAEGEKEKKVPVSIMDKLRKIEELEAELEVVKTFMLRLYSH HHHHHHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PGDVHKVEEALKDWHSRGLLWVEARNVEKLSGVGRAGEILEGLTLIGVVEKKMRGGESVY CCHHHHHHHHHHHHHHCCEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHH RHRSFSSG HHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA