Definition | Thermococcus onnurineus NA1, complete genome. |
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Accession | NC_011529 |
Length | 1,847,607 |
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The map label for this gene is 212224514
Identifier: 212224514
GI number: 212224514
Start: 1234414
End: 1235316
Strand: Reverse
Name: 212224514
Synonym: TON_1363
Alternate gene names: NA
Gene position: 1235316-1234414 (Counterclockwise)
Preceding gene: 212224516
Following gene: 212224513
Centisome position: 66.86
GC content: 53.82
Gene sequence:
>903_bases ATGCGCGTCATCCCACTCGCGTCGGAGAGCCTCGGCGTGAGGAGCTTAGCCACCTTCGTAGAGGCCTCTGGAATAAAAAT CCTCATCGACCCCGGTGTCGCCCTCGGGCCGAAGCGCTACGGCCTTCCACCGGCTAAGGCCGAGATGGAGGTACTCCAGA AGATGAGACGGAAGCTTCAGGGCTACGCGCGGAGGAGTGAGGTTGTCGTTATTTCCCACTATCATTACGACCACCACACA CCGTTCTTCGAAGGTCTGTACGAGAGTTCAAGCGAGAGCTACGCGAGGGAGATATACGAGGGAAAGCCCCTCTTCATAAA GCACCCCCGGGAAAACATAAACTTCAGCCAGAGGAAGCGCGCTTGGGCCTTCCTCAAAAACACCGAACCGATAGCGGGGA AGATTGAGTTCGCGGACGGCAAATCTTTTGACCTCGGCGGCGTTGAGTTGGAGTTCTCTCCAGCCGTTCCCCATGGAAGC GAAGGTTCCAGGCTCGGCTTCGTTGTGATGACGCTCATTGATGACGGCTCTAAGAGAGTAATCCACGCGAGCGATATTCA GATGCTCAACAGAAAATCTGTAGAGTGGATAATCGAGAAGGTTCCAGATTTGCTCATAACTGGGGGACCACCGACATACC TCGGTAAGCGCGCTGAGGGAAGCTGGCAGGCTGGCATTAAAAACCTCAACGAGATAATCCGCGAAACAGGAGCGGAGATA ATACTCGACCACCATATCATCAGGGATAAGAACTATCCGAGGTTCTTCGACGAGCTCGAGGAGATACCAAAGACCTTCGC GGGCTACCTGAAGGTTGAAGATCGACCGTTGGAGGCTTACAGGCGGGAACTTCACAAAATCGAGAAAGGTGGGGAGGCAG AGATACCGTTCAAACTAAGTTGA
Upstream 100 bases:
>100_bases ATGCCTCCTCGTTCGGGTAGAGATCCCACTCATCATCGGTCAACCTCACTAATGGGTAGGGCTTATTAAGGTTTGGCCCT CCATTTTGTTAGGTGATGGA
Downstream 100 bases:
>100_bases GGAAGCCGCCGTCCCTAGGGATAATCACTCGTCGAGTGCGTGAAAGGACAGTTCCTATATAATCACCAGATTGTGGTCGT CAACATTGGGTTTTTCGGTG
Product: protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MRVIPLASESLGVRSLATFVEASGIKILIDPGVALGPKRYGLPPAKAEMEVLQKMRRKLQGYARRSEVVVISHYHYDHHT PFFEGLYESSSESYAREIYEGKPLFIKHPRENINFSQRKRAWAFLKNTEPIAGKIEFADGKSFDLGGVELEFSPAVPHGS EGSRLGFVVMTLIDDGSKRVIHASDIQMLNRKSVEWIIEKVPDLLITGGPPTYLGKRAEGSWQAGIKNLNEIIRETGAEI ILDHHIIRDKNYPRFFDELEEIPKTFAGYLKVEDRPLEAYRRELHKIEKGGEAEIPFKLS
Sequences:
>Translated_300_residues MRVIPLASESLGVRSLATFVEASGIKILIDPGVALGPKRYGLPPAKAEMEVLQKMRRKLQGYARRSEVVVISHYHYDHHT PFFEGLYESSSESYAREIYEGKPLFIKHPRENINFSQRKRAWAFLKNTEPIAGKIEFADGKSFDLGGVELEFSPAVPHGS EGSRLGFVVMTLIDDGSKRVIHASDIQMLNRKSVEWIIEKVPDLLITGGPPTYLGKRAEGSWQAGIKNLNEIIRETGAEI ILDHHIIRDKNYPRFFDELEEIPKTFAGYLKVEDRPLEAYRRELHKIEKGGEAEIPFKLS >Mature_300_residues MRVIPLASESLGVRSLATFVEASGIKILIDPGVALGPKRYGLPPAKAEMEVLQKMRRKLQGYARRSEVVVISHYHYDHHT PFFEGLYESSSESYAREIYEGKPLFIKHPRENINFSQRKRAWAFLKNTEPIAGKIEFADGKSFDLGGVELEFSPAVPHGS EGSRLGFVVMTLIDDGSKRVIHASDIQMLNRKSVEWIIEKVPDLLITGGPPTYLGKRAEGSWQAGIKNLNEIIRETGAEI ILDHHIIRDKNYPRFFDELEEIPKTFAGYLKVEDRPLEAYRRELHKIEKGGEAEIPFKLS
Specific function: Unknown
COG id: COG2248
COG function: function code R; Predicted hydrolase (metallo-beta-lactamase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0282 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1363_THEON (B6YXP0)
Other databases:
- EMBL: CP000855 - RefSeq: YP_002307750.1 - GeneID: 7018392 - GenomeReviews: CP000855_GR - KEGG: ton:TON_1363 - HOGENOM: HBG542311 - OMA: GGPPTYL - ProtClustDB: PRK04286 - HAMAP: MF_01406 - InterPro: IPR001279 - InterPro: IPR014426 - PIRSF: PIRSF004944 - SMART: SM00849
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33999; Mature: 33999
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVIPLASESLGVRSLATFVEASGIKILIDPGVALGPKRYGLPPAKAEMEVLQKMRRKLQ CEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCEECCCCCCCCCCHHHHHHHHHHHHHHH GYARRSEVVVISHYHYDHHTPFFEGLYESSSESYAREIYEGKPLFIKHPRENINFSQRKR HHHCCCCEEEEEEEECCCCCHHHHHHHHCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHH AWAFLKNTEPIAGKIEFADGKSFDLGGVELEFSPAVPHGSEGSRLGFVVMTLIDDGSKRV HHHHHCCCCCCCEEEEECCCCEECCCCEEEEECCCCCCCCCCCEEEEEEEEEECCCCCEE IHASDIQMLNRKSVEWIIEKVPDLLITGGPPTYLGKRAEGSWQAGIKNLNEIIRETGAEI EEHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHCCCCCCCCHHHHHHHHHHHHHHCCCCE ILDHHIIRDKNYPRFFDELEEIPKTFAGYLKVEDRPLEAYRRELHKIEKGGEAEIPFKLS EEHHHHCCCCCCCHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCCCCEECC >Mature Secondary Structure MRVIPLASESLGVRSLATFVEASGIKILIDPGVALGPKRYGLPPAKAEMEVLQKMRRKLQ CEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCEECCCCCCCCCCHHHHHHHHHHHHHHH GYARRSEVVVISHYHYDHHTPFFEGLYESSSESYAREIYEGKPLFIKHPRENINFSQRKR HHHCCCCEEEEEEEECCCCCHHHHHHHHCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHH AWAFLKNTEPIAGKIEFADGKSFDLGGVELEFSPAVPHGSEGSRLGFVVMTLIDDGSKRV HHHHHCCCCCCCEEEEECCCCEECCCCEEEEECCCCCCCCCCCEEEEEEEEEECCCCCEE IHASDIQMLNRKSVEWIIEKVPDLLITGGPPTYLGKRAEGSWQAGIKNLNEIIRETGAEI EEHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHCCCCCCCCHHHHHHHHHHHHHHCCCCE ILDHHIIRDKNYPRFFDELEEIPKTFAGYLKVEDRPLEAYRRELHKIEKGGEAEIPFKLS EEHHHHCCCCCCCHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA