Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is 209695951
Identifier: 209695951
GI number: 209695951
Start: 2715627
End: 2715998
Strand: Reverse
Name: 209695951
Synonym: VSAL_I2533
Alternate gene names: NA
Gene position: 2715998-2715627 (Counterclockwise)
Preceding gene: 209695952
Following gene: 209695949
Centisome position: 81.68
GC content: 34.41
Gene sequence:
>372_bases GTTAGGGTAAACCTTACCTTTTCATATATCGCCTATCTTTGTCTTTATGGCAGTTTTTTCTGTATAGGGTGGGCGGTATT ATTGTTAAATATAATCCCTTTTCCTCTTATTCCTTTTCTTTTTTATTTCCTCTATCAACAGAGTAAATTGGCTTACCATG CGTTACTTACTCAACAAGGTATGTATAACTTTGTTAATAAAGAGTCGGATGATGATCGAGATTGGATTGTCAGTCATTCT CTATGGGTCAGTCGGTCGTTAATCATTATTAAATGCCATAACTTATATGACCATCGTACGATGTATTTATTAAAAGACAG TTGTCGATCTTCTTTTTTTAATGAGCTATCTATCATGATGCGGCACAGGTAA
Upstream 100 bases:
>100_bases CCAGATTTATTTACTTGGATCATGGGACATGGCCGCAGTGATAATTTAGCTCATGCTTCTATGATAGATAAAATTGTTGC GCATAATCACAGCAAACTCC
Downstream 100 bases:
>100_bases TTATCTGGTAAATCTATTTTTTAGTAATGCGATAAAATTAAAAAGCCCTACATAGATAAGATTCTATATAGGGCTTTTAT TGATCGTTTTACTTAGATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MRVNLTFSYIAYLCLYGSFFCIGWAVLLLNIIPFPLIPFLFYFLYQQSKLAYHALLTQQGMYNFVNKESDDDRDWIVSHS LWVSRSLIIIKCHNLYDHRTMYLLKDSCRSSFFNELSIMMRHR
Sequences:
>Translated_123_residues VRVNLTFSYIAYLCLYGSFFCIGWAVLLLNIIPFPLIPFLFYFLYQQSKLAYHALLTQQGMYNFVNKESDDDRDWIVSHS LWVSRSLIIIKCHNLYDHRTMYLLKDSCRSSFFNELSIMMRHR >Mature_123_residues VRVNLTFSYIAYLCLYGSFFCIGWAVLLLNIIPFPLIPFLFYFLYQQSKLAYHALLTQQGMYNFVNKESDDDRDWIVSHS LWVSRSLIIIKCHNLYDHRTMYLLKDSCRSSFFNELSIMMRHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14750; Mature: 14750
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure VRVNLTFSYIAYLCLYGSFFCIGWAVLLLNIIPFPLIPFLFYFLYQQSKLAYHALLTQQG CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MYNFVNKESDDDRDWIVSHSLWVSRSLIIIKCHNLYDHRTMYLLKDSCRSSFFNELSIMM HHHHHCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH RHR CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA