Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is pstC [H]
Identifier: 209695877
GI number: 209695877
Start: 2625104
End: 2627311
Strand: Reverse
Name: pstC [H]
Synonym: VSAL_I2454
Alternate gene names: 209695877
Gene position: 2627311-2625104 (Counterclockwise)
Preceding gene: 209695878
Following gene: 209695876
Centisome position: 79.01
GC content: 40.44
Gene sequence:
>2208_bases ATGGCATACGCCAAACCTAATCAGATCACTCGAGATAAACAACGTCGTGTTGTTGATCTGATTATACGTGTTTGGGTGAA ATCCAGTGGCGTAGGGATCATTGCGGCACTTATGCTTATCTGTTTTTATTTACTTGCTGTCATTGCCCCCATTTTTACGC CGGTCTCTGTTGAACCGTCTCATCAATATACTGCTCAATACTCGAATGCGACGTTAGCGATTGGCTCGGATGAACAAGGT AAAATGGTTTATCGTATTGATGACAGTGGTAAGGTGCAATTTATTGATTTAACCAATAACGAATTTGTTAGCGAACAACA AATTGTTGAACATCCAACCACATTTACGGCCACTATCGAAAGCCAAGATTGGTTTGCTTTTGGTGACGATAAAGGGAAAG TGACATTTTCTCAGATAGGTTTTCAGACCAATTATAAAAATGGTAAGCGACAACTTATCCCCTTTGCTGAGAAGTTTACG CCTTTTCCATCAATTCAAGTGGATGATAAAAAACAACCACTGACACAATTAGCGTTAAGTTTAACTCCCATTGAAGGTGT TATTTTAGCCAAAACTCAAGATGAACGATTTTTGGGTGTGGAACTCGATGGTTCTGTAAATAAAATGACAGGGGAAACTA TTTGGAAAGCACAAGCGATTGAATTTAAAGCGATGGGCAGCACCAAAGGATTGCTTTCAATGGTCATTACACCAAATAAC GATTTCATTTATTTATTGTTTGAGCATGAACTCCAAGTATGGACATTAAAAGATCATAAAGCGGAATTGCGAGAGAGCAT TACTCTTAATGGCGTCGCGCAAAAATTAACATTGTTAGCAGGGGCAAACTCGGTATTAATCCAGTTTGCAGATGGCAGCG TGTCTCAATGGTTTGATACGATTAATAATGAAAAACGCTCATTAACGTCTATTCGTTCGTTCACGTTTGATGCTCCAATA GCACAATTAGCCCCTGAAGTTTACCGAAAAGGGGTAAGCGTGATTGATACTGAAGGTCAGTTATCCATTATTCATACGAC GACAGAAAAAACATTATTCAGCCAACATCTGTTTAATAATAAAGTACTCGCTGTTACTCAACCACCGAATGCTGAGAAAT TAATTGTTTTAACGGACAAGGGATGGGAATGCTTTAGTGTGACCAACCCTCACCCTGAAGTGAGCGTTCAATCATTGTTT GGGAAAATGTGGTACGAAGGGTACCCTGAGCCGACGTATACTTGGCAATCAACCGCAGCTAATGATGATTTTGAATCTAA ATTCAGTTTAATGCCACTGGCTTTTGGTACGTTAAAAGCCGCATTTTATGCGTTGATATTTGCGGGTCCAATTGCGATTG GTAGCGCAATTTATACTGCGTATTTTATGTCAGCGAATGTACGTCGTTATGTTAAACCTACCATTGAAATTATGGAGGCT TTACCAACGGTTATTATTGGTTTGTTAGCGGGAATTTGGCTAGCTCCCATTATCGAAAATAATTTAACCGCCGTATTTAG CCTATTTATACTTTTTCCCTTAAGCATGATGATTATTGCCTTTATCTGGCATATTTTACCTGCTCATATAATGAGAAGGC TGCCTCGTGGTCAGCATGCCATTTTATTGATCCCCGCGCTGATTGGTGTGGGTTATCTCACATTTAACTATGGTTATGTT ATTGAAGGGTGGTTTTTTGCTGGGGATTTAAGAAATTACCTTGGTGATAAAGGGTTAGGTTACGATCAACGTAATGCATT GGTCGTTGGTTTAGCCATGGGGGCCGCTATTATCCCTACTATTTATACCATTGCAGAAGACGCGATCTTCTCTGTTCCTA AGCATTTATCCGAAGGGTCATTAGCACTGGGTGCTACTCAATGGCAAACGTTAACTAAAGTGGTGTTATTAACCGCAAGC CCGGGTATATTTTCTGCCGTGATGATGGGATTAGGGCGTGCCGTAGGTGAAACGATGATCGTATTAATGGCGACAGGTAA CACACCAATCATGGACGGAAACATTCTAGAGGGCATGAGAACATTGGCTGCGAATATTGCGATTGAAATGCCTGAATCTG AAATGGGAAGTACACACTTTAGAATGCTCTTTTTAGCGGCCTTTTTATTATTTGTTTTCACTTTCTTTGTGAACTCGTTG GCGGAGTGGGTTCGCCAAGGGTTACGCGAAAAGTACCGTAGTTTGTAG
Upstream 100 bases:
>100_bases CATTAAGTAAATTAAAGAATCAGGAATGATGAACGTTTGTTGTCATTCAATTGTCACCCATATTTATTAATATCAATAAG AAAACAGAGGTTAACTCATC
Downstream 100 bases:
>100_bases GCTGGTTTAAATGAAAATAAAGCATTGGATTAAATCAGGATCACCTTGGATATGGTTAACGGCTGGCTCAGTAAGCATCA GTATGATCACCGTGCTTGGG
Product: phosphate import protein, transmembrane component PstC
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 735; Mature: 734
Protein sequence:
>735_residues MAYAKPNQITRDKQRRVVDLIIRVWVKSSGVGIIAALMLICFYLLAVIAPIFTPVSVEPSHQYTAQYSNATLAIGSDEQG KMVYRIDDSGKVQFIDLTNNEFVSEQQIVEHPTTFTATIESQDWFAFGDDKGKVTFSQIGFQTNYKNGKRQLIPFAEKFT PFPSIQVDDKKQPLTQLALSLTPIEGVILAKTQDERFLGVELDGSVNKMTGETIWKAQAIEFKAMGSTKGLLSMVITPNN DFIYLLFEHELQVWTLKDHKAELRESITLNGVAQKLTLLAGANSVLIQFADGSVSQWFDTINNEKRSLTSIRSFTFDAPI AQLAPEVYRKGVSVIDTEGQLSIIHTTTEKTLFSQHLFNNKVLAVTQPPNAEKLIVLTDKGWECFSVTNPHPEVSVQSLF GKMWYEGYPEPTYTWQSTAANDDFESKFSLMPLAFGTLKAAFYALIFAGPIAIGSAIYTAYFMSANVRRYVKPTIEIMEA LPTVIIGLLAGIWLAPIIENNLTAVFSLFILFPLSMMIIAFIWHILPAHIMRRLPRGQHAILLIPALIGVGYLTFNYGYV IEGWFFAGDLRNYLGDKGLGYDQRNALVVGLAMGAAIIPTIYTIAEDAIFSVPKHLSEGSLALGATQWQTLTKVVLLTAS PGIFSAVMMGLGRAVGETMIVLMATGNTPIMDGNILEGMRTLAANIAIEMPESEMGSTHFRMLFLAAFLLFVFTFFVNSL AEWVRQGLREKYRSL
Sequences:
>Translated_735_residues MAYAKPNQITRDKQRRVVDLIIRVWVKSSGVGIIAALMLICFYLLAVIAPIFTPVSVEPSHQYTAQYSNATLAIGSDEQG KMVYRIDDSGKVQFIDLTNNEFVSEQQIVEHPTTFTATIESQDWFAFGDDKGKVTFSQIGFQTNYKNGKRQLIPFAEKFT PFPSIQVDDKKQPLTQLALSLTPIEGVILAKTQDERFLGVELDGSVNKMTGETIWKAQAIEFKAMGSTKGLLSMVITPNN DFIYLLFEHELQVWTLKDHKAELRESITLNGVAQKLTLLAGANSVLIQFADGSVSQWFDTINNEKRSLTSIRSFTFDAPI AQLAPEVYRKGVSVIDTEGQLSIIHTTTEKTLFSQHLFNNKVLAVTQPPNAEKLIVLTDKGWECFSVTNPHPEVSVQSLF GKMWYEGYPEPTYTWQSTAANDDFESKFSLMPLAFGTLKAAFYALIFAGPIAIGSAIYTAYFMSANVRRYVKPTIEIMEA LPTVIIGLLAGIWLAPIIENNLTAVFSLFILFPLSMMIIAFIWHILPAHIMRRLPRGQHAILLIPALIGVGYLTFNYGYV IEGWFFAGDLRNYLGDKGLGYDQRNALVVGLAMGAAIIPTIYTIAEDAIFSVPKHLSEGSLALGATQWQTLTKVVLLTAS PGIFSAVMMGLGRAVGETMIVLMATGNTPIMDGNILEGMRTLAANIAIEMPESEMGSTHFRMLFLAAFLLFVFTFFVNSL AEWVRQGLREKYRSL >Mature_734_residues AYAKPNQITRDKQRRVVDLIIRVWVKSSGVGIIAALMLICFYLLAVIAPIFTPVSVEPSHQYTAQYSNATLAIGSDEQGK MVYRIDDSGKVQFIDLTNNEFVSEQQIVEHPTTFTATIESQDWFAFGDDKGKVTFSQIGFQTNYKNGKRQLIPFAEKFTP FPSIQVDDKKQPLTQLALSLTPIEGVILAKTQDERFLGVELDGSVNKMTGETIWKAQAIEFKAMGSTKGLLSMVITPNND FIYLLFEHELQVWTLKDHKAELRESITLNGVAQKLTLLAGANSVLIQFADGSVSQWFDTINNEKRSLTSIRSFTFDAPIA QLAPEVYRKGVSVIDTEGQLSIIHTTTEKTLFSQHLFNNKVLAVTQPPNAEKLIVLTDKGWECFSVTNPHPEVSVQSLFG KMWYEGYPEPTYTWQSTAANDDFESKFSLMPLAFGTLKAAFYALIFAGPIAIGSAIYTAYFMSANVRRYVKPTIEIMEAL PTVIIGLLAGIWLAPIIENNLTAVFSLFILFPLSMMIIAFIWHILPAHIMRRLPRGQHAILLIPALIGVGYLTFNYGYVI EGWFFAGDLRNYLGDKGLGYDQRNALVVGLAMGAAIIPTIYTIAEDAIFSVPKHLSEGSLALGATQWQTLTKVVLLTASP GIFSAVMMGLGRAVGETMIVLMATGNTPIMDGNILEGMRTLAANIAIEMPESEMGSTHFRMLFLAAFLLFVFTFFVNSLA EWVRQGLREKYRSL
Specific function: Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4590
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=306, Percent_Identity=26.1437908496732, Blast_Score=79, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 81670; Mature: 81539
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYAKPNQITRDKQRRVVDLIIRVWVKSSGVGIIAALMLICFYLLAVIAPIFTPVSVEPS CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC HQYTAQYSNATLAIGSDEQGKMVYRIDDSGKVQFIDLTNNEFVSEQQIVEHPTTFTATIE CCCEEEECCEEEEECCCCCCCEEEEECCCCCEEEEEECCCCCCCHHHHHHCCCEEEEEEE SQDWFAFGDDKGKVTFSQIGFQTNYKNGKRQLIPFAEKFTPFPSIQVDDKKQPLTQLALS CCCCEEECCCCCCEEHHHHCCEECCCCCCEEECCHHHHCCCCCCEEECCCCCHHHHHHHH LTPIEGVILAKTQDERFLGVELDGSVNKMTGETIWKAQAIEFKAMGSTKGLLSMVITPNN CCCCCCEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHEEEEEECCCCCCEEEEEEECCC DFIYLLFEHELQVWTLKDHKAELRESITLNGVAQKLTLLAGANSVLIQFADGSVSQWFDT CEEEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHH INNEKRSLTSIRSFTFDAPIAQLAPEVYRKGVSVIDTEGQLSIIHTTTEKTLFSQHLFNN HCCCHHHHHHHHHHCCCCCHHHHCHHHHHCCCEEEECCCCEEEEEECHHHHHHHHHHCCC KVLAVTQPPNAEKLIVLTDKGWECFSVTNPHPEVSVQSLFGKMWYEGYPEPTYTWQSTAA CEEEEECCCCCCEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEECCCCC NDDFESKFSLMPLAFGTLKAAFYALIFAGPIAIGSAIYTAYFMSANVRRYVKPTIEIMEA CCCCHHHHHEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LPTVIIGLLAGIWLAPIIENNLTAVFSLFILFPLSMMIIAFIWHILPAHIMRRLPRGQHA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE ILLIPALIGVGYLTFNYGYVIEGWFFAGDLRNYLGDKGLGYDQRNALVVGLAMGAAIIPT EEEHHHHHHHHHHEEECCEEEEEEEEHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHH IYTIAEDAIFSVPKHLSEGSLALGATQWQTLTKVVLLTASPGIFSAVMMGLGRAVGETMI HHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHEEEEEECCCHHHHHHHHHHHHHHCCEEE VLMATGNTPIMDGNILEGMRTLAANIAIEMPESEMGSTHFRMLFLAAFLLFVFTFFVNSL EEEECCCCCCCCCHHHHHHHHHHHHEEEECCCHHCCCHHHHHHHHHHHHHHHHHHHHHHH AEWVRQGLREKYRSL HHHHHHHHHHHHHCC >Mature Secondary Structure AYAKPNQITRDKQRRVVDLIIRVWVKSSGVGIIAALMLICFYLLAVIAPIFTPVSVEPS CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC HQYTAQYSNATLAIGSDEQGKMVYRIDDSGKVQFIDLTNNEFVSEQQIVEHPTTFTATIE CCCEEEECCEEEEECCCCCCCEEEEECCCCCEEEEEECCCCCCCHHHHHHCCCEEEEEEE SQDWFAFGDDKGKVTFSQIGFQTNYKNGKRQLIPFAEKFTPFPSIQVDDKKQPLTQLALS CCCCEEECCCCCCEEHHHHCCEECCCCCCEEECCHHHHCCCCCCEEECCCCCHHHHHHHH LTPIEGVILAKTQDERFLGVELDGSVNKMTGETIWKAQAIEFKAMGSTKGLLSMVITPNN CCCCCCEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHEEEEEECCCCCCEEEEEEECCC DFIYLLFEHELQVWTLKDHKAELRESITLNGVAQKLTLLAGANSVLIQFADGSVSQWFDT CEEEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHH INNEKRSLTSIRSFTFDAPIAQLAPEVYRKGVSVIDTEGQLSIIHTTTEKTLFSQHLFNN HCCCHHHHHHHHHHCCCCCHHHHCHHHHHCCCEEEECCCCEEEEEECHHHHHHHHHHCCC KVLAVTQPPNAEKLIVLTDKGWECFSVTNPHPEVSVQSLFGKMWYEGYPEPTYTWQSTAA CEEEEECCCCCCEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEECCCCC NDDFESKFSLMPLAFGTLKAAFYALIFAGPIAIGSAIYTAYFMSANVRRYVKPTIEIMEA CCCCHHHHHEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LPTVIIGLLAGIWLAPIIENNLTAVFSLFILFPLSMMIIAFIWHILPAHIMRRLPRGQHA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE ILLIPALIGVGYLTFNYGYVIEGWFFAGDLRNYLGDKGLGYDQRNALVVGLAMGAAIIPT EEEHHHHHHHHHHEEECCEEEEEEEEHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHH IYTIAEDAIFSVPKHLSEGSLALGATQWQTLTKVVLLTASPGIFSAVMMGLGRAVGETMI HHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHEEEEEECCCHHHHHHHHHHHHHHCCEEE VLMATGNTPIMDGNILEGMRTLAANIAIEMPESEMGSTHFRMLFLAAFLLFVFTFFVNSL EEEECCCCCCCCCHHHHHHHHHHHHEEEECCCHHCCCHHHHHHHHHHHHHHHHHHHHHHH AEWVRQGLREKYRSL HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]