Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is pstA [H]
Identifier: 209695876
GI number: 209695876
Start: 2623564
End: 2625093
Strand: Reverse
Name: pstA [H]
Synonym: VSAL_I2453
Alternate gene names: 209695876
Gene position: 2625093-2623564 (Counterclockwise)
Preceding gene: 209695877
Following gene: 209695875
Centisome position: 78.95
GC content: 38.89
Gene sequence:
>1530_bases ATGAAAATAAAGCATTGGATTAAATCAGGATCACCTTGGATATGGTTAACGGCTGGCTCAGTAAGCATCAGTATGATCAC CGTGCTTGGGATCTTATTGCTTATCGGGTGGAAAGGGTTATCTTATTTTTGGCCTACGTCTTTGCAAGAATGGAAGACTG TAGAAGGTAATGTTGTTATTGGGCAACTTTATGACGTGCAAAAAATCCACAGTAATAATACGGAGAAAAAAGAACGTTTA GTGATTAAAGTCGGCAACAGAGACGTCAATGGTTTTGACTTTATTAGCTTAGACAGAGACCAAATAGCATCGGTGAGCAA ACCAAAAGACTTAGTGGTGGTCGATAGAGTTCAGCACGGTAAGTTTTTTGGGACAATAATTAAAGCCTCAAGTGGTTTAG AACTTACTCGCCAACAAGTCGAATCTTGGGTGAAAAGTGAAAAAGCAAAAATAGATTTATTAGAGCAAGAACAACACAAG TTATATAAATTATTGGACGATCTTCCTGCGTTAAATTTGTCGAATGATGCATTTACACAAAAAGAGAAAACGTTAACGGA AGAGCTAACGTCGATTTCAAATCAGCTAACTCAAAGCTATTTAGTGTTAAAAGACAGCCAAAATCAATCTTACTTATTAA GCAGCGATAATGTCGTTAATATTTGGTACCCGAATGCGATGATCTTAAGTGAACAGCTTTCTCATTGGGTAAATACATTA TATGACTTTTTATCTGAGCCTCCACGTGAAGCGAATTCTGAAGGCGGTGTATTTCCTGCCATTTTTGGTACCATTTTATT GGTGTTATTGATGTCAATTATCGTGATGCCATTAGGGGTGATCGCGGCTATTTATTTACATGAGTATGCAAAGCCAAATA TATTAACTCGATTAGTTCGGATTGCCGTTATCAATTTAGCGGGTGTTCCTTCTATTGTTTATGGTGTTTTTGGGTTGGGA TTTTTTGTTTATGTTGTTGGTGGAACGATTGACCAATTATTTTACTCAAACCAATTACCTACACCAACGTTTGGTACTCC TGGTCTATTATGGTCAGCACTTACGTTGGCAATTCTCACATTGCCCGTTGTTATTGTTGCTACAGAAGAGGGTTTAAGTC GTATCCCTAATTCAGTTCGTCATGGTTCGTTAGCGCTTGGGGCAACTCAATTTGAAACCTTATGGAAAATTGTGTTACCG ATGGCCAGTCCTGCGATAATGACGGGATTAATTCTAGCAGTAGCAAGGGCAGCAGGAGAGGTTGCCCCATTAATGTTGGT CGGAGTGGTAAAGCTTGCACCATCATTGCCGATTGATAGCGTTGCACCTTATTTACATTTAGACCGAAAATTTATGCACC TTGGCTATCATATTTATGACGTTGGTTTTCAAAGCCCAAATGTAGAAGCCGCTCGACCAATTGTGTATGCCACGGCCTTT TTATTAGTGACTGTGATTATTGGTTTGAACTTAACCGCTATCGCGATTCGTAATAATTTACGAGAAAAATACAGAACGTT GGAGTTGTAG
Upstream 100 bases:
>100_bases GCCTTTTTATTATTTGTTTTCACTTTCTTTGTGAACTCGTTGGCGGAGTGGGTTCGCCAAGGGTTACGCGAAAAGTACCG TAGTTTGTAGGCTGGTTTAA
Downstream 100 bases:
>100_bases TTATATGTATTCATTATCACCAGATCTGTCTTTTTTATCATCAATGGATGTCAATGATTTAGCTGATGAAAGTACAGCGA TAGAGATCAATAATCTGAGT
Product: phosphate import protein, transmembrane component PstA
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 509; Mature: 509
Protein sequence:
>509_residues MKIKHWIKSGSPWIWLTAGSVSISMITVLGILLLIGWKGLSYFWPTSLQEWKTVEGNVVIGQLYDVQKIHSNNTEKKERL VIKVGNRDVNGFDFISLDRDQIASVSKPKDLVVVDRVQHGKFFGTIIKASSGLELTRQQVESWVKSEKAKIDLLEQEQHK LYKLLDDLPALNLSNDAFTQKEKTLTEELTSISNQLTQSYLVLKDSQNQSYLLSSDNVVNIWYPNAMILSEQLSHWVNTL YDFLSEPPREANSEGGVFPAIFGTILLVLLMSIIVMPLGVIAAIYLHEYAKPNILTRLVRIAVINLAGVPSIVYGVFGLG FFVYVVGGTIDQLFYSNQLPTPTFGTPGLLWSALTLAILTLPVVIVATEEGLSRIPNSVRHGSLALGATQFETLWKIVLP MASPAIMTGLILAVARAAGEVAPLMLVGVVKLAPSLPIDSVAPYLHLDRKFMHLGYHIYDVGFQSPNVEAARPIVYATAF LLVTVIIGLNLTAIAIRNNLREKYRTLEL
Sequences:
>Translated_509_residues MKIKHWIKSGSPWIWLTAGSVSISMITVLGILLLIGWKGLSYFWPTSLQEWKTVEGNVVIGQLYDVQKIHSNNTEKKERL VIKVGNRDVNGFDFISLDRDQIASVSKPKDLVVVDRVQHGKFFGTIIKASSGLELTRQQVESWVKSEKAKIDLLEQEQHK LYKLLDDLPALNLSNDAFTQKEKTLTEELTSISNQLTQSYLVLKDSQNQSYLLSSDNVVNIWYPNAMILSEQLSHWVNTL YDFLSEPPREANSEGGVFPAIFGTILLVLLMSIIVMPLGVIAAIYLHEYAKPNILTRLVRIAVINLAGVPSIVYGVFGLG FFVYVVGGTIDQLFYSNQLPTPTFGTPGLLWSALTLAILTLPVVIVATEEGLSRIPNSVRHGSLALGATQFETLWKIVLP MASPAIMTGLILAVARAAGEVAPLMLVGVVKLAPSLPIDSVAPYLHLDRKFMHLGYHIYDVGFQSPNVEAARPIVYATAF LLVTVIIGLNLTAIAIRNNLREKYRTLEL >Mature_509_residues MKIKHWIKSGSPWIWLTAGSVSISMITVLGILLLIGWKGLSYFWPTSLQEWKTVEGNVVIGQLYDVQKIHSNNTEKKERL VIKVGNRDVNGFDFISLDRDQIASVSKPKDLVVVDRVQHGKFFGTIIKASSGLELTRQQVESWVKSEKAKIDLLEQEQHK LYKLLDDLPALNLSNDAFTQKEKTLTEELTSISNQLTQSYLVLKDSQNQSYLLSSDNVVNIWYPNAMILSEQLSHWVNTL YDFLSEPPREANSEGGVFPAIFGTILLVLLMSIIVMPLGVIAAIYLHEYAKPNILTRLVRIAVINLAGVPSIVYGVFGLG FFVYVVGGTIDQLFYSNQLPTPTFGTPGLLWSALTLAILTLPVVIVATEEGLSRIPNSVRHGSLALGATQFETLWKIVLP MASPAIMTGLILAVARAAGEVAPLMLVGVVKLAPSLPIDSVAPYLHLDRKFMHLGYHIYDVGFQSPNVEAARPIVYATAF LLVTVIIGLNLTAIAIRNNLREKYRTLEL
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0581
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790163, Length=191, Percent_Identity=34.5549738219895, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1790164, Length=174, Percent_Identity=31.6091954022989, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 56406; Mature: 56406
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKHWIKSGSPWIWLTAGSVSISMITVLGILLLIGWKGLSYFWPTSLQEWKTVEGNVVI CCCHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCEEE GQLYDVQKIHSNNTEKKERLVIKVGNRDVNGFDFISLDRDQIASVSKPKDLVVVDRVQHG EEHHHHHHHHCCCCCCHHEEEEEECCCCCCCCEEEEECHHHHHCCCCCCCEEEEECHHCC KFFGTIIKASSGLELTRQQVESWVKSEKAKIDLLEQEQHKLYKLLDDLPALNLSNDAFTQ CHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH KEKTLTEELTSISNQLTQSYLVLKDSQNQSYLLSSDNVVNIWYPNAMILSEQLSHWVNTL HHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHH YDFLSEPPREANSEGGVFPAIFGTILLVLLMSIIVMPLGVIAAIYLHEYAKPNILTRLVR HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH IAVINLAGVPSIVYGVFGLGFFVYVVGGTIDQLFYSNQLPTPTFGTPGLLWSALTLAILT HHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH LPVVIVATEEGLSRIPNSVRHGSLALGATQFETLWKIVLPMASPAIMTGLILAVARAAGE HCEEEEEECHHHHHCCHHHCCCCEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC VAPLMLVGVVKLAPSLPIDSVAPYLHLDRKFMHLGYHIYDVGFQSPNVEAARPIVYATAF HHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHCEEEEEECCCCCCCCHHHHHHHHHHH LLVTVIIGLNLTAIAIRNNLREKYRTLEL HHHHHHHHCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKIKHWIKSGSPWIWLTAGSVSISMITVLGILLLIGWKGLSYFWPTSLQEWKTVEGNVVI CCCHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCEEE GQLYDVQKIHSNNTEKKERLVIKVGNRDVNGFDFISLDRDQIASVSKPKDLVVVDRVQHG EEHHHHHHHHCCCCCCHHEEEEEECCCCCCCCEEEEECHHHHHCCCCCCCEEEEECHHCC KFFGTIIKASSGLELTRQQVESWVKSEKAKIDLLEQEQHKLYKLLDDLPALNLSNDAFTQ CHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH KEKTLTEELTSISNQLTQSYLVLKDSQNQSYLLSSDNVVNIWYPNAMILSEQLSHWVNTL HHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHH YDFLSEPPREANSEGGVFPAIFGTILLVLLMSIIVMPLGVIAAIYLHEYAKPNILTRLVR HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH IAVINLAGVPSIVYGVFGLGFFVYVVGGTIDQLFYSNQLPTPTFGTPGLLWSALTLAILT HHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH LPVVIVATEEGLSRIPNSVRHGSLALGATQFETLWKIVLPMASPAIMTGLILAVARAAGE HCEEEEEECHHHHHCCHHHCCCCEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC VAPLMLVGVVKLAPSLPIDSVAPYLHLDRKFMHLGYHIYDVGFQSPNVEAARPIVYATAF HHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHCEEEEEECCCCCCCCHHHHHHHHHHH LLVTVIIGLNLTAIAIRNNLREKYRTLEL HHHHHHHHCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]