Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is accA
Identifier: 209695835
GI number: 209695835
Start: 2578658
End: 2579617
Strand: Reverse
Name: accA
Synonym: VSAL_I2411
Alternate gene names: 209695835
Gene position: 2579617-2578658 (Counterclockwise)
Preceding gene: 209695836
Following gene: 209695834
Centisome position: 77.58
GC content: 39.48
Gene sequence:
>960_bases ATGAGCCTAAATTTTCTTGAATTTGAAAAACCAATTGCAGAACTAGAAGCTAAAATTGAAGCGCTGCGTGATATTTCTCG TCGTGGTGGTGATAATGCACTTGATCTAGATAAAGAAATTAAGCAATTAGAAGATAAATGTTTAGATCTTAAAAAGAAAA CATTTAGTGATTTAGGTGCGTGGGAAGTTGCTCAACTTGCTCGTCACCCAGAACGTCCATATGTATTAGATTACATTGAA CTTATGTTTACTGAGTTTGATGAATTAGCCGGTGATCGTGCTTTTGCTGATGATAAAGCATTAGTGGGTGGTATGGCTCG TTTAGATGGCCGTCCTGTGATGATAATTGGTCATCAAAAAGGACGTGGCACGAAAGAAAAAGTACGTCGCAATTTTGGTA TGCCAAAACCTGAAGGTTACCGTAAGGCAAAACGTTTAATGCAAATGGCTGAGCGTTTTAAAATGCCGATCATTACTTTT ATTGATACTGCTGGTGCTTATCCAGGTGTTGGTGCTGAAGAACGTGGTCAATCTGAAGCCATTGCTACGAACCTTAAAAT CATGTCTGAGCTAAGTGTTCCTGTGATTTGTAATGTTGTTGGTGAAGGCGGTTCTGGTGGTGCTCTTGCTATCGGTGTAG GTGATTATGTTAACATGCTTCAATACTCTACGTATTCAGTGATTTCTCCTGAAGGTTGTGCTTCAATTTTATGGCGTGAT TCAGATAAAGCACCTCAAGCGGCTGAAGCAATGGGACTTGTTGCTCCTCGTTTAAAAGAGCTAGAGTTGATTGATACGAT CATTGATGAACCATTAGGTGGTGCGCATCGTAATCATAAAGCAACGGCTGAGAATATTAAGCAACGTTTAATTGAACAAT TGAACGAGCTTGAAGGTTTTGATGAAGAAGCGTTGCTTGAACGTCGTTATCAACGTTTAATGAATTACGGTTACTGCTAA
Upstream 100 bases:
>100_bases TTTGAAGTCGTTGCTTGGCGAACAGCAAGTCGAGCTTGAATTTAACTAGAATAAGTAAGGCTGCTAATTTGAGCGGCCTT GAACTAACAAGGATTCTTTA
Downstream 100 bases:
>100_bases TAATTATGAGTAAAGTTCGGAACTAGATTCGCGAATTTTAATAATATAGAGTAAAGTGAAAACGAGCCTTAGTGCTCGTT TTTTTCATTTTTAGGTTTTA
Product: acetyl-CoA carboxylase carboxyltransferase subunit alpha
Products: NA
Alternate protein names: ACCase subunit alpha; Acetyl-CoA carboxylase carboxyltransferase subunit alpha
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MSLNFLEFEKPIAELEAKIEALRDISRRGGDNALDLDKEIKQLEDKCLDLKKKTFSDLGAWEVAQLARHPERPYVLDYIE LMFTEFDELAGDRAFADDKALVGGMARLDGRPVMIIGHQKGRGTKEKVRRNFGMPKPEGYRKAKRLMQMAERFKMPIITF IDTAGAYPGVGAEERGQSEAIATNLKIMSELSVPVICNVVGEGGSGGALAIGVGDYVNMLQYSTYSVISPEGCASILWRD SDKAPQAAEAMGLVAPRLKELELIDTIIDEPLGGAHRNHKATAENIKQRLIEQLNELEGFDEEALLERRYQRLMNYGYC
Sequences:
>Translated_319_residues MSLNFLEFEKPIAELEAKIEALRDISRRGGDNALDLDKEIKQLEDKCLDLKKKTFSDLGAWEVAQLARHPERPYVLDYIE LMFTEFDELAGDRAFADDKALVGGMARLDGRPVMIIGHQKGRGTKEKVRRNFGMPKPEGYRKAKRLMQMAERFKMPIITF IDTAGAYPGVGAEERGQSEAIATNLKIMSELSVPVICNVVGEGGSGGALAIGVGDYVNMLQYSTYSVISPEGCASILWRD SDKAPQAAEAMGLVAPRLKELELIDTIIDEPLGGAHRNHKATAENIKQRLIEQLNELEGFDEEALLERRYQRLMNYGYC >Mature_318_residues SLNFLEFEKPIAELEAKIEALRDISRRGGDNALDLDKEIKQLEDKCLDLKKKTFSDLGAWEVAQLARHPERPYVLDYIEL MFTEFDELAGDRAFADDKALVGGMARLDGRPVMIIGHQKGRGTKEKVRRNFGMPKPEGYRKAKRLMQMAERFKMPIITFI DTAGAYPGVGAEERGQSEAIATNLKIMSELSVPVICNVVGEGGSGGALAIGVGDYVNMLQYSTYSVISPEGCASILWRDS DKAPQAAEAMGLVAPRLKELELIDTIIDEPLGGAHRNHKATAENIKQRLIEQLNELEGFDEEALLERRYQRLMNYGYC
Specific function: Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-Co
COG id: COG0825
COG function: function code I; Acetyl-CoA carboxylase alpha subunit
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AccA family
Homologues:
Organism=Escherichia coli, GI1786382, Length=319, Percent_Identity=73.0407523510972, Blast_Score=491, Evalue=1e-140,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ACCA_ALISL (B6EJW4)
Other databases:
- EMBL: FM178379 - RefSeq: YP_002263765.1 - GeneID: 6989298 - GenomeReviews: FM178379_GR - KEGG: vsa:VSAL_I2411 - HOGENOM: HBG286557 - OMA: QLTKDIY - ProtClustDB: PRK05724 - HAMAP: MF_00823 - InterPro: IPR001095 - InterPro: IPR011763 - PANTHER: PTHR22855:SF3 - PRINTS: PR01069 - TIGRFAMs: TIGR00513
Pfam domain/function: PF03255 ACCA
EC number: =6.4.1.2
Molecular weight: Translated: 35587; Mature: 35456
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS50989 COA_CT_CTER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLNFLEFEKPIAELEAKIEALRDISRRGGDNALDLDKEIKQLEDKCLDLKKKTFSDLGA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH WEVAQLARHPERPYVLDYIELMFTEFDELAGDRAFADDKALVGGMARLDGRPVMIIGHQK HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEECCC GRGTKEKVRRNFGMPKPEGYRKAKRLMQMAERFKMPIITFIDTAGAYPGVGAEERGQSEA CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHEEHHCCCCCCCCCCHHCCCHHH IATNLKIMSELSVPVICNVVGEGGSGGALAIGVGDYVNMLQYSTYSVISPEGCASILWRD HHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHCCC SDKAPQAAEAMGLVAPRLKELELIDTIIDEPLGGAHRNHKATAENIKQRLIEQLNELEGF CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC DEEALLERRYQRLMNYGYC CHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SLNFLEFEKPIAELEAKIEALRDISRRGGDNALDLDKEIKQLEDKCLDLKKKTFSDLGA CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH WEVAQLARHPERPYVLDYIELMFTEFDELAGDRAFADDKALVGGMARLDGRPVMIIGHQK HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEECCC GRGTKEKVRRNFGMPKPEGYRKAKRLMQMAERFKMPIITFIDTAGAYPGVGAEERGQSEA CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHEEHHCCCCCCCCCCHHCCCHHH IATNLKIMSELSVPVICNVVGEGGSGGALAIGVGDYVNMLQYSTYSVISPEGCASILWRD HHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHCCC SDKAPQAAEAMGLVAPRLKELELIDTIIDEPLGGAHRNHKATAENIKQRLIEQLNELEGF CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC DEEALLERRYQRLMNYGYC CHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA