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The map label for this gene is dsbB [H]

Identifier: 209695590

GI number: 209695590

Start: 2307336

End: 2307851

Strand: Direct

Name: dsbB [H]

Synonym: VSAL_I2149

Alternate gene names: 209695590

Gene position: 2307336-2307851 (Clockwise)

Preceding gene: 209695589

Following gene: 209695592

Centisome position: 69.39

GC content: 40.12

Gene sequence:

>516_bases
ATGCAAGCCCTTAACCATTTTTCACGCATTCGCCTCTCTTGGCTTATTTTGCTTATCTTCATTCTCTTTTTTGAAGCTTG
TGCACTGACCTTCCAACACATCATAAAACTACCACCATGCGTCATGTGCATTTACGAACGAGTGGCCATGATGGGTATTG
CTGGTGCTGCCATTATTGGACTCTTAAACCCTAATAACATTATTTTCAGATGGTGTGGTCTTATTGCTTGGGGGATAAGT
GCTGGCTGGGGCTTAAAACTTGCTATGCAACATGTTGATTTTCAATTAAACCCTTCACCATTCTCAACGTGTGATTTATT
TGTCACGTTCCCATCATGGGCACCATTAAATAAATGGGCACCTTGGATGTTTGAAGCTTATGGTGACTGCAGCAAAATCG
TTTGGCAATTTCTAACACTTACCATGCCACAATGGTTAGTTATTATCTTTGCAGGTAATTTAGTTGCTCTCGCTATTATT
GTTATCGCTCAGTTCTTCAATAAGAAAAGCGCATAA

Upstream 100 bases:

>100_bases
CTAATGCCGTTTCTAGTGGTCATTAATAATGGCATAGCCACTTTTGATTGACTAAAAGGCTCTGTTTATACGGAGCCTTT
CTTTTTACTAAGGAATAATA

Downstream 100 bases:

>100_bases
TTAACTATTTATATTGCTAATAACAAAAAAGCCATCGGGTAATAATTACCAGATGGCTTTTTTATTTAAATCAGAAAATA
GAAATCTACCTATTTACCAC

Product: disulfide bond formation protein B

Products: NA

Alternate protein names: Disulfide oxidoreductase [H]

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MQALNHFSRIRLSWLILLIFILFFEACALTFQHIIKLPPCVMCIYERVAMMGIAGAAIIGLLNPNNIIFRWCGLIAWGIS
AGWGLKLAMQHVDFQLNPSPFSTCDLFVTFPSWAPLNKWAPWMFEAYGDCSKIVWQFLTLTMPQWLVIIFAGNLVALAII
VIAQFFNKKSA

Sequences:

>Translated_171_residues
MQALNHFSRIRLSWLILLIFILFFEACALTFQHIIKLPPCVMCIYERVAMMGIAGAAIIGLLNPNNIIFRWCGLIAWGIS
AGWGLKLAMQHVDFQLNPSPFSTCDLFVTFPSWAPLNKWAPWMFEAYGDCSKIVWQFLTLTMPQWLVIIFAGNLVALAII
VIAQFFNKKSA
>Mature_171_residues
MQALNHFSRIRLSWLILLIFILFFEACALTFQHIIKLPPCVMCIYERVAMMGIAGAAIIGLLNPNNIIFRWCGLIAWGIS
AGWGLKLAMQHVDFQLNPSPFSTCDLFVTFPSWAPLNKWAPWMFEAYGDCSKIVWQFLTLTMPQWLVIIFAGNLVALAII
VIAQFFNKKSA

Specific function: Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein [H]

COG id: COG1495

COG function: function code O; Disulfide bond formation protein DsbB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DsbB family [H]

Homologues:

Organism=Escherichia coli, GI1787433, Length=170, Percent_Identity=45.2941176470588, Blast_Score=155, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003752
- InterPro:   IPR022920 [H]

Pfam domain/function: PF02600 DsbB [H]

EC number: NA

Molecular weight: Translated: 19415; Mature: 19415

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQALNHFSRIRLSWLILLIFILFFEACALTFQHIIKLPPCVMCIYERVAMMGIAGAAIIG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHE
LLNPNNIIFRWCGLIAWGISAGWGLKLAMQHVDFQLNPSPFSTCDLFVTFPSWAPLNKWA
ECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEECCCCCCCEEEEEECCCCCCCCCCC
PWMFEAYGDCSKIVWQFLTLTMPQWLVIIFAGNLVALAIIVIAQFFNKKSA
CHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQALNHFSRIRLSWLILLIFILFFEACALTFQHIIKLPPCVMCIYERVAMMGIAGAAIIG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHE
LLNPNNIIFRWCGLIAWGISAGWGLKLAMQHVDFQLNPSPFSTCDLFVTFPSWAPLNKWA
ECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEECCCCCCCEEEEEECCCCCCCCCCC
PWMFEAYGDCSKIVWQFLTLTMPQWLVIIFAGNLVALAIIVIAQFFNKKSA
CHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA