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The map label for this gene is yccS [H]

Identifier: 209695576

GI number: 209695576

Start: 2285204

End: 2287408

Strand: Direct

Name: yccS [H]

Synonym: VSAL_I2135

Alternate gene names: 209695576

Gene position: 2285204-2287408 (Clockwise)

Preceding gene: 209695574

Following gene: 209695586

Centisome position: 68.72

GC content: 40.54

Gene sequence:

>2205_bases
ATGGGTTTTTCTCTTATAAAAAGTCATTTTGTGAATAGTCGTCAGCTTTTTCGTCAGTACTGGGCCAATAAAACCATTAA
TTACAGTGTTCGTGTATTACTTGCCTTAATCGGTGCAGTGATCCCTTGCTGGTATCTTGGTGAAAATACCGCGATCACCC
CATTAATTTTAGGGATTATTGCTGCTGCACTTGCTGAAACCGAAGACAAATTATCGGGACGATTAAAAGCACTTTTCTTT
ACGTTTATTTGCTTTGCTATTGCAGCGTTCTCTATTGAACTTTTATTTGATACTCCGATACTTTTTGCGATTGGTTTATT
CTTATCCACCATCAGCTTTATTATGCTTGGGGCTTTAGGTCCACGTTACGCCAGTATCGCTTTTGGATCATTACTCATCG
CTATTTACACCATGTTAGGTGCCGATCAAAGCCCTAATTTATGGTATCAACCGACCCTATTGCTCGGTGGTGCCGCTTGG
TATTATTCCATCTCTTTGACGTGGCAAATATTCTGGCCGTTGCAACCAGTTCAACAAAATTTAGCGACCGTCTTTGAAAC
CATGGCTACGTATTTAAACAATAAAAGTGAACTCTTTCACCCTGTCACTAATTTAACACCTCAACCTTATCGCCTCCAAG
AAGCCAAAAATAATGCGCAAATGGTAACGGCATTAAACAACAGCAAAACGTCATTATTAACCCGAGCTAAACGTGGTCAT
GTTGTTGGGGCAAGCGATCGATTCTTAAAAATTTATTTCATTGCACAAGACATTCATGAGCGAGTTAGCTCAAGTCATTA
TCGTTACCAAGACTTAGCAAATACATTTAATCGCAGTGACATTCTTTTTCGCTTTAAGCATCTTCTTCACAACCAATCTT
TAGCCTGTGAGGAAGTGGCTCGTTGCTTATCGTTAGGTTTGCCTTATCAACACGCACAAACTTCTATTTTCGCCTTGGAT
GAGTTACAACAATCGCTGCTTGCATTAAAAGAACAACATCGACCGGAGTGGCGATTGTCGTTAATTCAATTGGATTATTT
ATTTAATAACCTTGCAACCGTTGAACGTCAATTTGCCAATATCAGTAACCCTGAACGTGCATGTTTAGAAAATGAAGATG
ACACAGTTCTGTCAGACCAAGGCGCTCATACTCCAAAAGCAATGTGGCAACGACTGAGGGCGAATCTTACACCCGACTCC
ATGCTTTTTCGTCACGCGATACGTATGGCGATTGCCCTAACTGCGGGTTATGGCATTATTCAAGCATTCAATTTAAATCA
TGGGTATTGGATTTTATTAACCACATTGTTTGTCTGCCAACCAAACTACAGCGCAACAAAAGAAAAACTGGTCGCTCGTA
TTGCTGGTACGCTAATTGGTTTAGTTGTCGGTACGTTACTACTGGTTCTCTTTCCTTCAATCGACAGCCAATTAGTCTTG
ATGGTTATTGCGGGCGTGCTTTTCTTTGCATTTAGATTAGCGAATTACGGGTTTGCCACTGCCTTTATCACGATCTTAGT
CTTATTCTGCTTTAACCAATTAGGTGAAGGCTATGCGGTGATACTTCCGCGTCTTGGTGATACGATCGTAGGGTGTGCAT
TAGCAGTAGTTGCGGTTACTTACATACTTCCAGATTGGCAGTCAAAACGCTTGCATAAAGTCATGGCAGACACGGTAACA
GCACATCAAGATTACCTCTCAAATATCATTGCCCAATACCGCGCAGGGAAGAAAGACTCACTTCAATATCGTCTTTCTCG
CCGCCAAGCACACAATAATGAGGCCGCTTTAAGCTCTGCTATCAGTAACATGCTCATTGAACCCGGAAAATACCAAACCG
CGGTGGATGAATCATTCCGATTTCTTTGTTTATGTCATGCGATGCTCAGCTATATTTCGGCTTTAGGTGCTCACCGAACT
CGTTTAAAGGATGAAGAAACACATCAATTAGTTGCAGAGTCTCACCGTATTATTCATTCTCATTTGAACCAAATTCAATG
CCAATTAAACAATAAAGAATTTAACGTTGAGAATAATATTCGTAACGAGGAAGGGATTGAAAAACGTCTTTCAGAATGGC
GTGATGAAGATGAAAACTCAGTCAGAATGGTCTTACAGCAGCTTCATTTAATCCACCAAATATTACCTGAAATGCATTCT
TTGTCAGAAATATTAAGCACCCCAAGTAAACCTGAGTCAAAATAA

Upstream 100 bases:

>100_bases
AGACCGCATAGGATATCAGGTTATTTTTTTGTTGTCCCAGATCAGTATTAAGACATTGATTGATGAGCAAACGCTGTCTT
CTCTATATGACTTTGTTATG

Downstream 100 bases:

>100_bases
ATGGTTCTAAAGTAAAAATGGCAATAAGCGTACGGTCTTATTGCCATCTTATCTGTCTGTTATTCTTTAACTTATCGTCC
ACTGAGATAACGAACGTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 734; Mature: 733

Protein sequence:

>734_residues
MGFSLIKSHFVNSRQLFRQYWANKTINYSVRVLLALIGAVIPCWYLGENTAITPLILGIIAAALAETEDKLSGRLKALFF
TFICFAIAAFSIELLFDTPILFAIGLFLSTISFIMLGALGPRYASIAFGSLLIAIYTMLGADQSPNLWYQPTLLLGGAAW
YYSISLTWQIFWPLQPVQQNLATVFETMATYLNNKSELFHPVTNLTPQPYRLQEAKNNAQMVTALNNSKTSLLTRAKRGH
VVGASDRFLKIYFIAQDIHERVSSSHYRYQDLANTFNRSDILFRFKHLLHNQSLACEEVARCLSLGLPYQHAQTSIFALD
ELQQSLLALKEQHRPEWRLSLIQLDYLFNNLATVERQFANISNPERACLENEDDTVLSDQGAHTPKAMWQRLRANLTPDS
MLFRHAIRMAIALTAGYGIIQAFNLNHGYWILLTTLFVCQPNYSATKEKLVARIAGTLIGLVVGTLLLVLFPSIDSQLVL
MVIAGVLFFAFRLANYGFATAFITILVLFCFNQLGEGYAVILPRLGDTIVGCALAVVAVTYILPDWQSKRLHKVMADTVT
AHQDYLSNIIAQYRAGKKDSLQYRLSRRQAHNNEAALSSAISNMLIEPGKYQTAVDESFRFLCLCHAMLSYISALGAHRT
RLKDEETHQLVAESHRIIHSHLNQIQCQLNNKEFNVENNIRNEEGIEKRLSEWRDEDENSVRMVLQQLHLIHQILPEMHS
LSEILSTPSKPESK

Sequences:

>Translated_734_residues
MGFSLIKSHFVNSRQLFRQYWANKTINYSVRVLLALIGAVIPCWYLGENTAITPLILGIIAAALAETEDKLSGRLKALFF
TFICFAIAAFSIELLFDTPILFAIGLFLSTISFIMLGALGPRYASIAFGSLLIAIYTMLGADQSPNLWYQPTLLLGGAAW
YYSISLTWQIFWPLQPVQQNLATVFETMATYLNNKSELFHPVTNLTPQPYRLQEAKNNAQMVTALNNSKTSLLTRAKRGH
VVGASDRFLKIYFIAQDIHERVSSSHYRYQDLANTFNRSDILFRFKHLLHNQSLACEEVARCLSLGLPYQHAQTSIFALD
ELQQSLLALKEQHRPEWRLSLIQLDYLFNNLATVERQFANISNPERACLENEDDTVLSDQGAHTPKAMWQRLRANLTPDS
MLFRHAIRMAIALTAGYGIIQAFNLNHGYWILLTTLFVCQPNYSATKEKLVARIAGTLIGLVVGTLLLVLFPSIDSQLVL
MVIAGVLFFAFRLANYGFATAFITILVLFCFNQLGEGYAVILPRLGDTIVGCALAVVAVTYILPDWQSKRLHKVMADTVT
AHQDYLSNIIAQYRAGKKDSLQYRLSRRQAHNNEAALSSAISNMLIEPGKYQTAVDESFRFLCLCHAMLSYISALGAHRT
RLKDEETHQLVAESHRIIHSHLNQIQCQLNNKEFNVENNIRNEEGIEKRLSEWRDEDENSVRMVLQQLHLIHQILPEMHS
LSEILSTPSKPESK
>Mature_733_residues
GFSLIKSHFVNSRQLFRQYWANKTINYSVRVLLALIGAVIPCWYLGENTAITPLILGIIAAALAETEDKLSGRLKALFFT
FICFAIAAFSIELLFDTPILFAIGLFLSTISFIMLGALGPRYASIAFGSLLIAIYTMLGADQSPNLWYQPTLLLGGAAWY
YSISLTWQIFWPLQPVQQNLATVFETMATYLNNKSELFHPVTNLTPQPYRLQEAKNNAQMVTALNNSKTSLLTRAKRGHV
VGASDRFLKIYFIAQDIHERVSSSHYRYQDLANTFNRSDILFRFKHLLHNQSLACEEVARCLSLGLPYQHAQTSIFALDE
LQQSLLALKEQHRPEWRLSLIQLDYLFNNLATVERQFANISNPERACLENEDDTVLSDQGAHTPKAMWQRLRANLTPDSM
LFRHAIRMAIALTAGYGIIQAFNLNHGYWILLTTLFVCQPNYSATKEKLVARIAGTLIGLVVGTLLLVLFPSIDSQLVLM
VIAGVLFFAFRLANYGFATAFITILVLFCFNQLGEGYAVILPRLGDTIVGCALAVVAVTYILPDWQSKRLHKVMADTVTA
HQDYLSNIIAQYRAGKKDSLQYRLSRRQAHNNEAALSSAISNMLIEPGKYQTAVDESFRFLCLCHAMLSYISALGAHRTR
LKDEETHQLVAESHRIIHSHLNQIQCQLNNKEFNVENNIRNEEGIEKRLSEWRDEDENSVRMVLQQLHLIHQILPEMHSL
SEILSTPSKPESK

Specific function: Unknown

COG id: COG1289

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yccS/yhfK family [H]

Homologues:

Organism=Escherichia coli, GI87081808, Length=717, Percent_Identity=42.9567642956764, Blast_Score=551, Evalue=1e-158,
Organism=Escherichia coli, GI87082248, Length=615, Percent_Identity=26.1788617886179, Blast_Score=133, Evalue=4e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010019
- InterPro:   IPR010020 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 83013; Mature: 82882

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFSLIKSHFVNSRQLFRQYWANKTINYSVRVLLALIGAVIPCWYLGENTAITPLILGII
CCHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
AAALAETEDKLSGRLKALFFTFICFAIAAFSIELLFDTPILFAIGLFLSTISFIMLGALG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
PRYASIAFGSLLIAIYTMLGADQSPNLWYQPTLLLGGAAWYYSISLTWQIFWPLQPVQQN
CHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHEECEEEEEEEEEEEEEECCCHHHHHH
LATVFETMATYLNNKSELFHPVTNLTPQPYRLQEAKNNAQMVTALNNSKTSLLTRAKRGH
HHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHCCCCEEEEEECCCHHHHHHHHHCCC
VVGASDRFLKIYFIAQDIHERVSSSHYRYQDLANTFNRSDILFRFKHLLHNQSLACEEVA
EECCCCCEEEEEEHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHH
RCLSLGLPYQHAQTSIFALDELQQSLLALKEQHRPEWRLSLIQLDYLFNNLATVERQFAN
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC
ISNPERACLENEDDTVLSDQGAHTPKAMWQRLRANLTPDSMLFRHAIRMAIALTAGYGII
CCCCHHHHCCCCCCCEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHE
QAFNLNHGYWILLTTLFVCQPNYSATKEKLVARIAGTLIGLVVGTLLLVLFPSIDSQLVL
EEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
MVIAGVLFFAFRLANYGFATAFITILVLFCFNQLGEGYAVILPRLGDTIVGCALAVVAVT
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEECHHCHHHHHHHHHHHHHH
YILPDWQSKRLHKVMADTVTAHQDYLSNIIAQYRAGKKDSLQYRLSRRQAHNNEAALSSA
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHH
ISNMLIEPGKYQTAVDESFRFLCLCHAMLSYISALGAHRTRLKDEETHQLVAESHRIIHS
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
HLNQIQCQLNNKEFNVENNIRNEEGIEKRLSEWRDEDENSVRMVLQQLHLIHQILPEMHS
HHHHHHEEECCCEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LSEILSTPSKPESK
HHHHHCCCCCCCCC
>Mature Secondary Structure 
GFSLIKSHFVNSRQLFRQYWANKTINYSVRVLLALIGAVIPCWYLGENTAITPLILGII
CHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
AAALAETEDKLSGRLKALFFTFICFAIAAFSIELLFDTPILFAIGLFLSTISFIMLGALG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
PRYASIAFGSLLIAIYTMLGADQSPNLWYQPTLLLGGAAWYYSISLTWQIFWPLQPVQQN
CHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHEECEEEEEEEEEEEEEECCCHHHHHH
LATVFETMATYLNNKSELFHPVTNLTPQPYRLQEAKNNAQMVTALNNSKTSLLTRAKRGH
HHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHCCCCEEEEEECCCHHHHHHHHHCCC
VVGASDRFLKIYFIAQDIHERVSSSHYRYQDLANTFNRSDILFRFKHLLHNQSLACEEVA
EECCCCCEEEEEEHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHH
RCLSLGLPYQHAQTSIFALDELQQSLLALKEQHRPEWRLSLIQLDYLFNNLATVERQFAN
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC
ISNPERACLENEDDTVLSDQGAHTPKAMWQRLRANLTPDSMLFRHAIRMAIALTAGYGII
CCCCHHHHCCCCCCCEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHE
QAFNLNHGYWILLTTLFVCQPNYSATKEKLVARIAGTLIGLVVGTLLLVLFPSIDSQLVL
EEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
MVIAGVLFFAFRLANYGFATAFITILVLFCFNQLGEGYAVILPRLGDTIVGCALAVVAVT
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEECHHCHHHHHHHHHHHHHH
YILPDWQSKRLHKVMADTVTAHQDYLSNIIAQYRAGKKDSLQYRLSRRQAHNNEAALSSA
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHH
ISNMLIEPGKYQTAVDESFRFLCLCHAMLSYISALGAHRTRLKDEETHQLVAESHRIIHS
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
HLNQIQCQLNNKEFNVENNIRNEEGIEKRLSEWRDEDENSVRMVLQQLHLIHQILPEMHS
HHHHHHEEECCCEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LSEILSTPSKPESK
HHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]