Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

Click here to switch to the map view.

The map label for this gene is 209695494

Identifier: 209695494

GI number: 209695494

Start: 2191622

End: 2192140

Strand: Direct

Name: 209695494

Synonym: VSAL_I2046

Alternate gene names: NA

Gene position: 2191622-2192140 (Clockwise)

Preceding gene: 209695490

Following gene: 209695495

Centisome position: 65.91

GC content: 38.54

Gene sequence:

>519_bases
TTGCGCCTCATTCCTAATTCCTCGTTTGGTATCAACATGGATCCAGTTATTCGCCGAGCAAAAGAAATTGATCTCTTTCG
CTTAAACTCAATGATGTATCAGCTACACGATGAACATCATCAGCAATGCCCTGAACTATTTAAAACCGCGTCTGAAATAG
AAGAAGAGAAAAGCATCTCTCGGTATTTAGATGATCCTGAGTGCATGGTTTATGTTGCTGAAAAAGACGATGATATTGTG
GGCTTTGTCACTGGGCATTTTTGTGAGTTAGTCTCTACAGTAAGTAAACCCGTAATGATGGCTACGATCGATGAGCTGTA
TGTTGAAAAAGCATGCCGTAGAGATAAAATAGCGGATAAATTGATGACGCGTATTGAACAAGAATTACGAGATTACGGCG
TAAAAGAAATTTTTGTTGAAGTATGGGGATTTAACCAATCAGCATTGGACTTCTATTATCAGCAAGGCTTAAAAGAGCAT
ATCCATTATTTACGTAAACCTCTAGTCGATAACGAGTAA

Upstream 100 bases:

>100_bases
GCCATACTTTCTAATTTAATTCATAAAACTGATAGGTTGCTTAATGAATATAGACTCTGATGCATCGGAGTCTTTTTTTT
GTTTATAAATAATGGTCTAA

Downstream 100 bases:

>100_bases
TAGAGACAATGATAAAAATAGTATTCCGATACATCATATTACTTTGTGCATTGTTTTCTACGCATATTTTTGCAGGAGAA
GGCATGGAACCTAAAGGGGC

Product: acetyltransferase (GNAT) family protein

Products: NA

Alternate protein names: Acetyltransferase Family Protein

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MRLIPNSSFGINMDPVIRRAKEIDLFRLNSMMYQLHDEHHQQCPELFKTASEIEEEKSISRYLDDPECMVYVAEKDDDIV
GFVTGHFCELVSTVSKPVMMATIDELYVEKACRRDKIADKLMTRIEQELRDYGVKEIFVEVWGFNQSALDFYYQQGLKEH
IHYLRKPLVDNE

Sequences:

>Translated_172_residues
MRLIPNSSFGINMDPVIRRAKEIDLFRLNSMMYQLHDEHHQQCPELFKTASEIEEEKSISRYLDDPECMVYVAEKDDDIV
GFVTGHFCELVSTVSKPVMMATIDELYVEKACRRDKIADKLMTRIEQELRDYGVKEIFVEVWGFNQSALDFYYQQGLKEH
IHYLRKPLVDNE
>Mature_172_residues
MRLIPNSSFGINMDPVIRRAKEIDLFRLNSMMYQLHDEHHQQCPELFKTASEIEEEKSISRYLDDPECMVYVAEKDDDIV
GFVTGHFCELVSTVSKPVMMATIDELYVEKACRRDKIADKLMTRIEQELRDYGVKEIFVEVWGFNQSALDFYYQQGLKEH
IHYLRKPLVDNE

Specific function: Unknown

COG id: COG0454

COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20289; Mature: 20289

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLIPNSSFGINMDPVIRRAKEIDLFRLNSMMYQLHDEHHQQCPELFKTASEIEEEKSIS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYLDDPECMVYVAEKDDDIVGFVTGHFCELVSTVSKPVMMATIDELYVEKACRRDKIADK
HHCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LMTRIEQELRDYGVKEIFVEVWGFNQSALDFYYQQGLKEHIHYLRKPLVDNE
HHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRLIPNSSFGINMDPVIRRAKEIDLFRLNSMMYQLHDEHHQQCPELFKTASEIEEEKSIS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYLDDPECMVYVAEKDDDIVGFVTGHFCELVSTVSKPVMMATIDELYVEKACRRDKIADK
HHCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LMTRIEQELRDYGVKEIFVEVWGFNQSALDFYYQQGLKEHIHYLRKPLVDNE
HHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA