| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is 209695494
Identifier: 209695494
GI number: 209695494
Start: 2191622
End: 2192140
Strand: Direct
Name: 209695494
Synonym: VSAL_I2046
Alternate gene names: NA
Gene position: 2191622-2192140 (Clockwise)
Preceding gene: 209695490
Following gene: 209695495
Centisome position: 65.91
GC content: 38.54
Gene sequence:
>519_bases TTGCGCCTCATTCCTAATTCCTCGTTTGGTATCAACATGGATCCAGTTATTCGCCGAGCAAAAGAAATTGATCTCTTTCG CTTAAACTCAATGATGTATCAGCTACACGATGAACATCATCAGCAATGCCCTGAACTATTTAAAACCGCGTCTGAAATAG AAGAAGAGAAAAGCATCTCTCGGTATTTAGATGATCCTGAGTGCATGGTTTATGTTGCTGAAAAAGACGATGATATTGTG GGCTTTGTCACTGGGCATTTTTGTGAGTTAGTCTCTACAGTAAGTAAACCCGTAATGATGGCTACGATCGATGAGCTGTA TGTTGAAAAAGCATGCCGTAGAGATAAAATAGCGGATAAATTGATGACGCGTATTGAACAAGAATTACGAGATTACGGCG TAAAAGAAATTTTTGTTGAAGTATGGGGATTTAACCAATCAGCATTGGACTTCTATTATCAGCAAGGCTTAAAAGAGCAT ATCCATTATTTACGTAAACCTCTAGTCGATAACGAGTAA
Upstream 100 bases:
>100_bases GCCATACTTTCTAATTTAATTCATAAAACTGATAGGTTGCTTAATGAATATAGACTCTGATGCATCGGAGTCTTTTTTTT GTTTATAAATAATGGTCTAA
Downstream 100 bases:
>100_bases TAGAGACAATGATAAAAATAGTATTCCGATACATCATATTACTTTGTGCATTGTTTTCTACGCATATTTTTGCAGGAGAA GGCATGGAACCTAAAGGGGC
Product: acetyltransferase (GNAT) family protein
Products: NA
Alternate protein names: Acetyltransferase Family Protein
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MRLIPNSSFGINMDPVIRRAKEIDLFRLNSMMYQLHDEHHQQCPELFKTASEIEEEKSISRYLDDPECMVYVAEKDDDIV GFVTGHFCELVSTVSKPVMMATIDELYVEKACRRDKIADKLMTRIEQELRDYGVKEIFVEVWGFNQSALDFYYQQGLKEH IHYLRKPLVDNE
Sequences:
>Translated_172_residues MRLIPNSSFGINMDPVIRRAKEIDLFRLNSMMYQLHDEHHQQCPELFKTASEIEEEKSISRYLDDPECMVYVAEKDDDIV GFVTGHFCELVSTVSKPVMMATIDELYVEKACRRDKIADKLMTRIEQELRDYGVKEIFVEVWGFNQSALDFYYQQGLKEH IHYLRKPLVDNE >Mature_172_residues MRLIPNSSFGINMDPVIRRAKEIDLFRLNSMMYQLHDEHHQQCPELFKTASEIEEEKSISRYLDDPECMVYVAEKDDDIV GFVTGHFCELVSTVSKPVMMATIDELYVEKACRRDKIADKLMTRIEQELRDYGVKEIFVEVWGFNQSALDFYYQQGLKEH IHYLRKPLVDNE
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20289; Mature: 20289
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLIPNSSFGINMDPVIRRAKEIDLFRLNSMMYQLHDEHHQQCPELFKTASEIEEEKSIS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RYLDDPECMVYVAEKDDDIVGFVTGHFCELVSTVSKPVMMATIDELYVEKACRRDKIADK HHCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LMTRIEQELRDYGVKEIFVEVWGFNQSALDFYYQQGLKEHIHYLRKPLVDNE HHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRLIPNSSFGINMDPVIRRAKEIDLFRLNSMMYQLHDEHHQQCPELFKTASEIEEEKSIS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RYLDDPECMVYVAEKDDDIVGFVTGHFCELVSTVSKPVMMATIDELYVEKACRRDKIADK HHCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LMTRIEQELRDYGVKEIFVEVWGFNQSALDFYYQQGLKEHIHYLRKPLVDNE HHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA