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The map label for this gene is torR [H]

Identifier: 209695444

GI number: 209695444

Start: 2126867

End: 2127565

Strand: Direct

Name: torR [H]

Synonym: VSAL_I1985

Alternate gene names: 209695444

Gene position: 2126867-2127565 (Clockwise)

Preceding gene: 209695435

Following gene: 209695445

Centisome position: 63.96

GC content: 39.77

Gene sequence:

>699_bases
ATGAGCTATCACATTTTAGTTGTTGAAGACGAAGTGGTAACTCGCTCTAAGCTTGTAGGCTATTTTGAAGCCGAGGGATA
TCAAGTGAGCGAGGCTGAAACGGGCGCAGAAATGCGAACTGTTTTGGCTGAACAAAAAGTTGATTTAATTATGCTTGATA
TAAACCTACCAGGAGAGGATGGTTTATTATTGGCGCGTGAATTACGCAGCCAGTCTAATATTGGTATTATTTTAGTTACA
GGACGAACTGATAGTATTGACCGCATCGTAGGTTTAGAGATGGGTGCGGATGATTACGTAACAAAACCTGTGGAGTTACG
TGAGCTTTTAGTCCGAGTTAAAAATCTATTTTGGCGTATGTCATTAGCAAATGAACCCGTAGAATTAGATGAATCAAATT
TAATTCGTTTTGGGGAATGGACGTTTGATATTCAACGTCGTGCTTTATCGAACAATGGTGAGCCAGTTAAGTTAACGAAA
GCCGAATATGAGCTATTAGTTGCTTTGTCGTCTTATCCGAACACGGTATTATCACGTGAACGTATTTTAAATATGATTAG
CCACCGTGTTGATGCGCCAAATGACAGAATGATTGATGTTTTGATCAGGCGAATGCGTGCCAAAATGGAAGTGGATCCAA
AAAATCCTCAAATATTTGTTACTGTTCATGGCGAAGGGTACATGTTTGCTGGTGATTGA

Upstream 100 bases:

>100_bases
AATAATATACAGAAATATCAATTGAGAATTGGCATTATTACAATATATGAATAGAATGTAATAAGAACCATCCTAATAAC
CATAAAAAAAAGAGAAAATT

Downstream 100 bases:

>100_bases
TTTTAGTTTAATCATCGATAAAAAAGATAATGTTAAAGCCGCTCTTATTTGAGCGGCTTTTTTTATACCTATAATGCAGT
CGTTATAATTAATCGTGAAC

Product: DNA-binding transcriptional regulator TorR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MSYHILVVEDEVVTRSKLVGYFEAEGYQVSEAETGAEMRTVLAEQKVDLIMLDINLPGEDGLLLARELRSQSNIGIILVT
GRTDSIDRIVGLEMGADDYVTKPVELRELLVRVKNLFWRMSLANEPVELDESNLIRFGEWTFDIQRRALSNNGEPVKLTK
AEYELLVALSSYPNTVLSRERILNMISHRVDAPNDRMIDVLIRRMRAKMEVDPKNPQIFVTVHGEGYMFAGD

Sequences:

>Translated_232_residues
MSYHILVVEDEVVTRSKLVGYFEAEGYQVSEAETGAEMRTVLAEQKVDLIMLDINLPGEDGLLLARELRSQSNIGIILVT
GRTDSIDRIVGLEMGADDYVTKPVELRELLVRVKNLFWRMSLANEPVELDESNLIRFGEWTFDIQRRALSNNGEPVKLTK
AEYELLVALSSYPNTVLSRERILNMISHRVDAPNDRMIDVLIRRMRAKMEVDPKNPQIFVTVHGEGYMFAGD
>Mature_231_residues
SYHILVVEDEVVTRSKLVGYFEAEGYQVSEAETGAEMRTVLAEQKVDLIMLDINLPGEDGLLLARELRSQSNIGIILVTG
RTDSIDRIVGLEMGADDYVTKPVELRELLVRVKNLFWRMSLANEPVELDESNLIRFGEWTFDIQRRALSNNGEPVKLTKA
EYELLVALSSYPNTVLSRERILNMISHRVDAPNDRMIDVLIRRMRAKMEVDPKNPQIFVTVHGEGYMFAGD

Specific function: Member of the two-component regulatory system torS/torR involved in the anaerobic utilization of trimethylamine-N-oxide (TMAO). Phosphorylated torR activates the transcription of the torCAD operon by binding to four decameric boxes located in the torCAD p

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1787229, Length=233, Percent_Identity=55.793991416309, Blast_Score=264, Evalue=4e-72,
Organism=Escherichia coli, GI1790863, Length=231, Percent_Identity=46.7532467532467, Blast_Score=220, Evalue=7e-59,
Organism=Escherichia coli, GI1789809, Length=234, Percent_Identity=40.5982905982906, Blast_Score=171, Evalue=3e-44,
Organism=Escherichia coli, GI1788394, Length=229, Percent_Identity=38.4279475982533, Blast_Score=139, Evalue=2e-34,
Organism=Escherichia coli, GI1786911, Length=226, Percent_Identity=33.6283185840708, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1786599, Length=233, Percent_Identity=34.7639484978541, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1787375, Length=228, Percent_Identity=35.0877192982456, Blast_Score=117, Evalue=6e-28,
Organism=Escherichia coli, GI1790860, Length=228, Percent_Identity=31.140350877193, Blast_Score=111, Evalue=5e-26,
Organism=Escherichia coli, GI1790552, Length=229, Percent_Identity=32.3144104803493, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI145693140, Length=231, Percent_Identity=29.8701298701299, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI87082012, Length=227, Percent_Identity=29.5154185022026, Blast_Score=98, Evalue=5e-22,
Organism=Escherichia coli, GI1786784, Length=226, Percent_Identity=31.858407079646, Blast_Score=95, Evalue=3e-21,
Organism=Escherichia coli, GI2367329, Length=226, Percent_Identity=30.9734513274336, Blast_Score=94, Evalue=6e-21,
Organism=Escherichia coli, GI1789402, Length=227, Percent_Identity=28.6343612334802, Blast_Score=86, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26400; Mature: 26269

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYHILVVEDEVVTRSKLVGYFEAEGYQVSEAETGAEMRTVLAEQKVDLIMLDINLPGED
CCEEEEEEECCHHHHHHHEEEEECCCEEECCHHCCHHHHHHHHHCCCCEEEEEEECCCCC
GLLLARELRSQSNIGIILVTGRTDSIDRIVGLEMGADDYVTKPVELRELLVRVKNLFWRM
CEEHHHHHCCCCCCEEEEEECCCCCCHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHEEH
SLANEPVELDESNLIRFGEWTFDIQRRALSNNGEPVKLTKAEYELLVALSSYPNTVLSRE
HCCCCCCCCCCCCEEEECCEEHHHHHHHHCCCCCEEEEECCCEEEEEEECCCCCHHHHHH
RILNMISHRVDAPNDRMIDVLIRRMRAKMEVDPKNPQIFVTVHGEGYMFAGD
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEECC
>Mature Secondary Structure 
SYHILVVEDEVVTRSKLVGYFEAEGYQVSEAETGAEMRTVLAEQKVDLIMLDINLPGED
CEEEEEEECCHHHHHHHEEEEECCCEEECCHHCCHHHHHHHHHCCCCEEEEEEECCCCC
GLLLARELRSQSNIGIILVTGRTDSIDRIVGLEMGADDYVTKPVELRELLVRVKNLFWRM
CEEHHHHHCCCCCCEEEEEECCCCCCHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHEEH
SLANEPVELDESNLIRFGEWTFDIQRRALSNNGEPVKLTKAEYELLVALSSYPNTVLSRE
HCCCCCCCCCCCCEEEECCEEHHHHHHHHCCCCCEEEEECCCEEEEEEECCCCCHHHHHH
RILNMISHRVDAPNDRMIDVLIRRMRAKMEVDPKNPQIFVTVHGEGYMFAGD
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]