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The map label for this gene is 209695434

Identifier: 209695434

GI number: 209695434

Start: 2116807

End: 2117469

Strand: Direct

Name: 209695434

Synonym: VSAL_I1975

Alternate gene names: NA

Gene position: 2116807-2117469 (Clockwise)

Preceding gene: 209695430

Following gene: 209695435

Centisome position: 63.66

GC content: 38.76

Gene sequence:

>663_bases
ATGCCTAAGTGGGCAAAAACGATCTTGATAGCGGCGGCGTTTTTTCCTTGTATTGTGTTTGCTCATCCTCATTCTTGGGT
TGATATGACAACAACAATTGAAGGTACCGAAAATACAATTACTGGTTTAGCAATGAATTGGACGTTTGATGCAATGACAT
CTGCATATGCTCTTGATGGGGAGGATTTATCTTCTGAGAATAGAGTGGAAACGATGAGAAAATTGGCTGATTCAATGATA
AATAATGTTTCAGGTTCACATTATTACACCTATTTTGATGAGAATAAAACACCGATAAAATTTACACTGCATCAGCATGG
GCGATTAACTCAAAAGAAAGGGAAACTAACGCTTTCTTTTGATTTACGCTTGGATAAACCTCAAAAAATCACATCATCGT
CGCTTAACTTAAGGGTTTTTGAGCCCAGTTTTTATGTTGATATGGCATGGAAAAATGAGACATCAATTACGCTTTCGAAA
GCATTATCTCAACAATGTCGGGTTGAAATCATAACCCCTCATCCAACCGCAAAACAGATGGCTTACGCGATGTCATTGCC
TCAAGATGCCGCCCCTGATAATGCATTGGGGCAACTGTTTACACAACGTGCGGTTGTTCATTGCAAAGCAGATATGAATC
AAAAAGGTGAAGTGAGTGAATAA

Upstream 100 bases:

>100_bases
TTATATTAAACGTAATAAGAGAGGGTAATACGAGGTATTAGATTTAATGGATAACCGAGAGAGTAAAGTAAAAGAATCAG
AAAAAAATGAAAGTAATAAA

Downstream 100 bases:

>100_bases
AATGATAAGTTCAAAAATGTTCAAACAGGCAATGAAACCGGTTATCAATATCTTAGTTTTTATTACGGTAAGTATTATTG
CTCTGGATGTTTTATGGCAG

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MPKWAKTILIAAAFFPCIVFAHPHSWVDMTTTIEGTENTITGLAMNWTFDAMTSAYALDGEDLSSENRVETMRKLADSMI
NNVSGSHYYTYFDENKTPIKFTLHQHGRLTQKKGKLTLSFDLRLDKPQKITSSSLNLRVFEPSFYVDMAWKNETSITLSK
ALSQQCRVEIITPHPTAKQMAYAMSLPQDAAPDNALGQLFTQRAVVHCKADMNQKGEVSE

Sequences:

>Translated_220_residues
MPKWAKTILIAAAFFPCIVFAHPHSWVDMTTTIEGTENTITGLAMNWTFDAMTSAYALDGEDLSSENRVETMRKLADSMI
NNVSGSHYYTYFDENKTPIKFTLHQHGRLTQKKGKLTLSFDLRLDKPQKITSSSLNLRVFEPSFYVDMAWKNETSITLSK
ALSQQCRVEIITPHPTAKQMAYAMSLPQDAAPDNALGQLFTQRAVVHCKADMNQKGEVSE
>Mature_219_residues
PKWAKTILIAAAFFPCIVFAHPHSWVDMTTTIEGTENTITGLAMNWTFDAMTSAYALDGEDLSSENRVETMRKLADSMIN
NVSGSHYYTYFDENKTPIKFTLHQHGRLTQKKGKLTLSFDLRLDKPQKITSSSLNLRVFEPSFYVDMAWKNETSITLSKA
LSQQCRVEIITPHPTAKQMAYAMSLPQDAAPDNALGQLFTQRAVVHCKADMNQKGEVSE

Specific function: Unknown

COG id: COG3683

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010412
- InterPro:   IPR016537 [H]

Pfam domain/function: PF06226 DUF1007 [H]

EC number: NA

Molecular weight: Translated: 24760; Mature: 24629

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKWAKTILIAAAFFPCIVFAHPHSWVDMTTTIEGTENTITGLAMNWTFDAMTSAYALDG
CCHHHHHHHHHHHHHHHEEEECCCCCEEEEEEECCCCCEEEEEEEECCHHHHHHEEEECC
EDLSSENRVETMRKLADSMINNVSGSHYYTYFDENKTPIKFTLHQHGRLTQKKGKLTLSF
CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCCEECCCCCEEEEE
DLRLDKPQKITSSSLNLRVFEPSFYVDMAWKNETSITLSKALSQQCRVEIITPHPTAKQM
EEEECCCCCCCCCCCEEEEECCCEEEEEEECCCCCCHHHHHHHHCCEEEEECCCCCHHHH
AYAMSLPQDAAPDNALGQLFTQRAVVHCKADMNQKGEVSE
HHHHCCCCCCCCCHHHHHHHHHHHEEEEECCCCCCCCCCC
>Mature Secondary Structure 
PKWAKTILIAAAFFPCIVFAHPHSWVDMTTTIEGTENTITGLAMNWTFDAMTSAYALDG
CHHHHHHHHHHHHHHHEEEECCCCCEEEEEEECCCCCEEEEEEEECCHHHHHHEEEECC
EDLSSENRVETMRKLADSMINNVSGSHYYTYFDENKTPIKFTLHQHGRLTQKKGKLTLSF
CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCCEECCCCCEEEEE
DLRLDKPQKITSSSLNLRVFEPSFYVDMAWKNETSITLSKALSQQCRVEIITPHPTAKQM
EEEECCCCCCCCCCCEEEEECCCEEEEEEECCCCCCHHHHHHHHCCEEEEECCCCCHHHH
AYAMSLPQDAAPDNALGQLFTQRAVVHCKADMNQKGEVSE
HHHHCCCCCCCCCHHHHHHHHHHHEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]