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The map label for this gene is exbB1 [H]

Identifier: 209695231

GI number: 209695231

Start: 1866457

End: 1867137

Strand: Direct

Name: exbB1 [H]

Synonym: VSAL_I1752

Alternate gene names: 209695231

Gene position: 1866457-1867137 (Clockwise)

Preceding gene: 209695227

Following gene: 209695232

Centisome position: 56.13

GC content: 39.21

Gene sequence:

>681_bases
ATGACTGGTTTTATCAACCTTTATTCACAACTTGGAATGATGGCATTACCATTGTTTATCTGCTCCGTTCTTACGCTTAT
ATTATTGGCCGAACGTATTCTCCATTTGCTTTTTTCTTCTGGATGTAGCCACCGAAAAATTGCACTTTCTTATAACAAGT
TAAATAAAAACGATGATAAAGAGATCAATAATATTATCGTTACTTTGAATTCACAACGAGCGTTATCGGCCAAAGGCAAC
GCAATGTTGTTAGCCCATCGTCATTTTGATAAAGCGTTACGAGAAGACGTCGCAGGATTATGGCTACAAGAAAAGCGACA
TCAGCTTCGTTCAGGTTTAAGACTTCTTTCTCTTATCGGCGTAATAACTCCCCTACTTGGTCTACTTGGAACCGTTCTTG
GACTTATTGATATGTTTAAAGAAGTAGCGGCAACGACGGGATCCATCACTCCTAATATTCTTGCTGATGGGTTGGGCTTT
GCAATGAGAACAACCGCTATAGGACTCATCATTGCAGTGCCTGCTATTTCAGGTTCACAACTTCTTGGACTATGGGCAGA
TAACATTCTATCTAAACTAGAGTATTCATTAAATGTCACAAATCTGTGGATTGAGGGGGTGGCACCCATGAAAAATAAAA
ATGAACAAGAGGCATCATTACGTTCAATAGAGGCTATCTAA

Upstream 100 bases:

>100_bases
AAATTGGCAATTTTCCCCTCAAATTATTGACGGTCAGGCCATTGCACATCGTGTGCAGATCCCTGTTCGTTTTTCTTTAA
ATAAGTCATAGGAAGTTATC

Downstream 100 bases:

>100_bases
TGATTCAATCCAATAGACAAGAAGAGTTAGATAATCTTCAACCTGACCTCACACCATTACTCGATATCATTTTTATTGTC
ATGGTATTTTTATTATTAAC

Product: TonB system transport protein ExbB1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MTGFINLYSQLGMMALPLFICSVLTLILLAERILHLLFSSGCSHRKIALSYNKLNKNDDKEINNIIVTLNSQRALSAKGN
AMLLAHRHFDKALREDVAGLWLQEKRHQLRSGLRLLSLIGVITPLLGLLGTVLGLIDMFKEVAATTGSITPNILADGLGF
AMRTTAIGLIIAVPAISGSQLLGLWADNILSKLEYSLNVTNLWIEGVAPMKNKNEQEASLRSIEAI

Sequences:

>Translated_226_residues
MTGFINLYSQLGMMALPLFICSVLTLILLAERILHLLFSSGCSHRKIALSYNKLNKNDDKEINNIIVTLNSQRALSAKGN
AMLLAHRHFDKALREDVAGLWLQEKRHQLRSGLRLLSLIGVITPLLGLLGTVLGLIDMFKEVAATTGSITPNILADGLGF
AMRTTAIGLIIAVPAISGSQLLGLWADNILSKLEYSLNVTNLWIEGVAPMKNKNEQEASLRSIEAI
>Mature_225_residues
TGFINLYSQLGMMALPLFICSVLTLILLAERILHLLFSSGCSHRKIALSYNKLNKNDDKEINNIIVTLNSQRALSAKGNA
MLLAHRHFDKALREDVAGLWLQEKRHQLRSGLRLLSLIGVITPLLGLLGTVLGLIDMFKEVAATTGSITPNILADGLGFA
MRTTAIGLIIAVPAISGSQLLGLWADNILSKLEYSLNVTNLWIEGVAPMKNKNEQEASLRSIEAI

Specific function: Involved in the tonB-dependent energy-dependent transport of various receptor-bound substrates. Protects exbD from proteolytic degradation and functionally stabilizes tonB [H]

COG id: COG0811

COG function: function code U; Biopolymer transport proteins

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbB/tolQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002898 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 24686; Mature: 24554

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGFINLYSQLGMMALPLFICSVLTLILLAERILHLLFSSGCSHRKIALSYNKLNKNDDK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHCCCCCCH
EINNIIVTLNSQRALSAKGNAMLLAHRHFDKALREDVAGLWLQEKRHQLRSGLRLLSLIG
HHCEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VITPLLGLLGTVLGLIDMFKEVAATTGSITPNILADGLGFAMRTTAIGLIIAVPAISGSQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
LLGLWADNILSKLEYSLNVTNLWIEGVAPMKNKNEQEASLRSIEAI
HHHHHHHHHHHHHHHHCCHHHHEEECCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
TGFINLYSQLGMMALPLFICSVLTLILLAERILHLLFSSGCSHRKIALSYNKLNKNDDK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHCCCCCCH
EINNIIVTLNSQRALSAKGNAMLLAHRHFDKALREDVAGLWLQEKRHQLRSGLRLLSLIG
HHCEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VITPLLGLLGTVLGLIDMFKEVAATTGSITPNILADGLGFAMRTTAIGLIIAVPAISGSQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
LLGLWADNILSKLEYSLNVTNLWIEGVAPMKNKNEQEASLRSIEAI
HHHHHHHHHHHHHHHHCCHHHHEEECCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9781885; 10952301 [H]