Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695210

Identifier: 209695210

GI number: 209695210

Start: 1835774

End: 1837129

Strand: Direct

Name: 209695210

Synonym: VSAL_I1725

Alternate gene names: NA

Gene position: 1835774-1837129 (Clockwise)

Preceding gene: 209695206

Following gene: 209695212

Centisome position: 55.21

GC content: 36.65

Gene sequence:

>1356_bases
GTGATTACAGTTGGTAAGAAAGATGGCTTATCACTAAAAATATCCCACATCGTTGAAGAATCTAAGCAGCATGAGCTTGA
GATGTATCTTTTTATTCCTGGAGAGTTAGGTTTAAACAAAGACATGGTTTCTGAATCTGAATTTTATTTCAGCTCAATTC
AAAGCCAGCGTACCTATTTCAGTGATAAAAACCATCTTCCCCTTGTCCACTCTCGCTTAGCTCAACGTGGACGTTTATCA
ACTGAACAATATCGTTTAAGTTTGAGTTTGTATGCTTATCAATATGCACTTGCCTTAGAAAAAGCCGTACAGCAACTGAA
TGAAACTTCCCGTGAAAACATTACGCATAAAGAAGTGGATGATGCGATCGATCTCGCCATCGATATTCTTAGAAAGTTAC
GACGTAACGTACCTTATGAAGATAATTTAAAACGTTACTATGCCAATATCGATAATTATTTATCTTGGTACACTGAGCAA
CGTTTTCTTTCATTACTTGCTCATATGCCAAGAAATGAAGAATATAAACTTGTAAAAGAACGCTTAATTGATATCTGTGA
AAAAGAAGTATTACACCGTTTAGATAAGAGCTATAACTCACGAAAAGCACGTGATGACATTACTCGAATGTCGAATAAAA
TGCGTTTATTACGTCGTTTAATCGAGTTCCCTATTGTATTAAAAGAGAAAAACTTTGCACTAGGTAAGCATATTAAACGA
ATGGTGAAAGGCGGCGCAACCGCTGTTGTTATGATTTTTGTTTCATTGATGGTGATTCAAGCGCGCGGTTTCTTAGGTGA
AATTACCGCCTCCTTTATTTTTGCGATCTCTTTTATCTACGCGATGCGTGAAGTATTTAAAGATGACTTACGTGATGTAA
TGTGGCGCTGGATACGTAAAGGCCAACCAAAATGGCGTAAACGTTATTTTGATCCTACAACCAACAGTTACGTTGGTAGA
AAATTAGAATGGCTAGATTACATGACATTTGTCGAGCTCGATTCTGAAATTCAAAAACTGCGTAAACATCGAGTAGTTCA
ACGTGAAGAAGTGGTTTTAAGCTATAAAAGCCAAACAAAGATGGCAATCACTAAATTTATGACTGGGTATGAACAAACCC
GTGAAACCATGCTCATTGATCTTCGCCCTATTGCACGTTTAATGGAAAAAGGGTCTGAAAAGATCTATCAGTTAAATGAA
GGGCAAGTCAGTAAAGAATCGGTTGAAAAACGTCATCTAATTAACTTAATCATTCGAGAAACGATGGATGACTACAGTAC
TCAACTTCACCGTTGGAAGATTGTCGTTAACCGCTCTAAAATTGTCGATATCGAAAAAATATCAGATAACAACTAA

Upstream 100 bases:

>100_bases
ATTTTAATCATTACTTCAATTCCTAAATAAAATACTCGGCGATTATACCCGAACTCTGATATGCTTGCTGTATGAATTAC
CATTTTTATAGGAATTTCCT

Downstream 100 bases:

>100_bases
ATAGCTTCATCTCTGAATGAGTTCGTTGTTATTTATTAAAAAGAACCTGAAATTAAAAAGCCTCCACTCATTGTTTTTTG
AGTTGGAGGCTTTTTACTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 451; Mature: 451

Protein sequence:

>451_residues
MITVGKKDGLSLKISHIVEESKQHELEMYLFIPGELGLNKDMVSESEFYFSSIQSQRTYFSDKNHLPLVHSRLAQRGRLS
TEQYRLSLSLYAYQYALALEKAVQQLNETSRENITHKEVDDAIDLAIDILRKLRRNVPYEDNLKRYYANIDNYLSWYTEQ
RFLSLLAHMPRNEEYKLVKERLIDICEKEVLHRLDKSYNSRKARDDITRMSNKMRLLRRLIEFPIVLKEKNFALGKHIKR
MVKGGATAVVMIFVSLMVIQARGFLGEITASFIFAISFIYAMREVFKDDLRDVMWRWIRKGQPKWRKRYFDPTTNSYVGR
KLEWLDYMTFVELDSEIQKLRKHRVVQREEVVLSYKSQTKMAITKFMTGYEQTRETMLIDLRPIARLMEKGSEKIYQLNE
GQVSKESVEKRHLINLIIRETMDDYSTQLHRWKIVVNRSKIVDIEKISDNN

Sequences:

>Translated_451_residues
MITVGKKDGLSLKISHIVEESKQHELEMYLFIPGELGLNKDMVSESEFYFSSIQSQRTYFSDKNHLPLVHSRLAQRGRLS
TEQYRLSLSLYAYQYALALEKAVQQLNETSRENITHKEVDDAIDLAIDILRKLRRNVPYEDNLKRYYANIDNYLSWYTEQ
RFLSLLAHMPRNEEYKLVKERLIDICEKEVLHRLDKSYNSRKARDDITRMSNKMRLLRRLIEFPIVLKEKNFALGKHIKR
MVKGGATAVVMIFVSLMVIQARGFLGEITASFIFAISFIYAMREVFKDDLRDVMWRWIRKGQPKWRKRYFDPTTNSYVGR
KLEWLDYMTFVELDSEIQKLRKHRVVQREEVVLSYKSQTKMAITKFMTGYEQTRETMLIDLRPIARLMEKGSEKIYQLNE
GQVSKESVEKRHLINLIIRETMDDYSTQLHRWKIVVNRSKIVDIEKISDNN
>Mature_451_residues
MITVGKKDGLSLKISHIVEESKQHELEMYLFIPGELGLNKDMVSESEFYFSSIQSQRTYFSDKNHLPLVHSRLAQRGRLS
TEQYRLSLSLYAYQYALALEKAVQQLNETSRENITHKEVDDAIDLAIDILRKLRRNVPYEDNLKRYYANIDNYLSWYTEQ
RFLSLLAHMPRNEEYKLVKERLIDICEKEVLHRLDKSYNSRKARDDITRMSNKMRLLRRLIEFPIVLKEKNFALGKHIKR
MVKGGATAVVMIFVSLMVIQARGFLGEITASFIFAISFIYAMREVFKDDLRDVMWRWIRKGQPKWRKRYFDPTTNSYVGR
KLEWLDYMTFVELDSEIQKLRKHRVVQREEVVLSYKSQTKMAITKFMTGYEQTRETMLIDLRPIARLMEKGSEKIYQLNE
GQVSKESVEKRHLINLIIRETMDDYSTQLHRWKIVVNRSKIVDIEKISDNN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53643; Mature: 53643

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITVGKKDGLSLKISHIVEESKQHELEMYLFIPGELGLNKDMVSESEFYFSSIQSQRTYF
CCCCCCCCCCEEEHHHHHHHHHCCCEEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHC
SDKNHLPLVHSRLAQRGRLSTEQYRLSLSLYAYQYALALEKAVQQLNETSRENITHKEVD
CCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
DAIDLAIDILRKLRRNVPYEDNLKRYYANIDNYLSWYTEQRFLSLLAHMPRNEEYKLVKE
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
RLIDICEKEVLHRLDKSYNSRKARDDITRMSNKMRLLRRLIEFPIVLKEKNFALGKHIKR
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHH
MVKGGATAVVMIFVSLMVIQARGFLGEITASFIFAISFIYAMREVFKDDLRDVMWRWIRK
HHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GQPKWRKRYFDPTTNSYVGRKLEWLDYMTFVELDSEIQKLRKHRVVQREEVVLSYKSQTK
CCCHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAITKFMTGYEQTRETMLIDLRPIARLMEKGSEKIYQLNEGQVSKESVEKRHLINLIIRE
HHHHHHHHHHHHHHHHHEEHHHHHHHHHHCCCHHHEECCCCCCCHHHHHHHHHHHHHHHH
TMDDYSTQLHRWKIVVNRSKIVDIEKISDNN
HHHHHHHHHHHHHEEEECCCEEEEHHCCCCC
>Mature Secondary Structure
MITVGKKDGLSLKISHIVEESKQHELEMYLFIPGELGLNKDMVSESEFYFSSIQSQRTYF
CCCCCCCCCCEEEHHHHHHHHHCCCEEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHC
SDKNHLPLVHSRLAQRGRLSTEQYRLSLSLYAYQYALALEKAVQQLNETSRENITHKEVD
CCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
DAIDLAIDILRKLRRNVPYEDNLKRYYANIDNYLSWYTEQRFLSLLAHMPRNEEYKLVKE
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
RLIDICEKEVLHRLDKSYNSRKARDDITRMSNKMRLLRRLIEFPIVLKEKNFALGKHIKR
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHH
MVKGGATAVVMIFVSLMVIQARGFLGEITASFIFAISFIYAMREVFKDDLRDVMWRWIRK
HHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GQPKWRKRYFDPTTNSYVGRKLEWLDYMTFVELDSEIQKLRKHRVVQREEVVLSYKSQTK
CCCHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAITKFMTGYEQTRETMLIDLRPIARLMEKGSEKIYQLNEGQVSKESVEKRHLINLIIRE
HHHHHHHHHHHHHHHHHEEHHHHHHHHHHCCCHHHEECCCCCCCHHHHHHHHHHHHHHHH
TMDDYSTQLHRWKIVVNRSKIVDIEKISDNN
HHHHHHHHHHHHHEEEECCCEEEEHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA