Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695200

Identifier: 209695200

GI number: 209695200

Start: 1821513

End: 1821863

Strand: Direct

Name: 209695200

Synonym: VSAL_I1711

Alternate gene names: NA

Gene position: 1821513-1821863 (Clockwise)

Preceding gene: 209695199

Following gene: 209695203

Centisome position: 54.78

GC content: 36.47

Gene sequence:

>351_bases
ATGAGCAAATTAACGTCAGATACTCAAGCAAACCTAGATCTTTTCATTGCTGAAACAAAAGAAACTCAACTAGTTTGGAG
CCTTTATAACGATGAAGGTTGGATTTCTGTTGAATCTACTGAATTTGAAAACGCTGAAGTAATGCCATTTTGGTCGAACA
AAGAAGATGCCGCATTTCATAATGTTGAAGAATGGGCTGATTTTGAAGTCACAGAAATCCCACTAGATATCTTCGCTGAA
GATTGGTTAGTGACTTTATCTGAAGATGGTGTTTTAGTTGGTACTAACTGGAACCAACAACTTGAAGGTAAAGAAATAGA
AGCGACTGAGCTTGCAAAACTATACCTTTAA

Upstream 100 bases:

>100_bases
ATTAACTGATAGTTTTATAACATAATTTTTTCTAAATTTAAGTATCAAATTTCTCATAATCCTTTATTCTTTACGTGTTT
ATTTTAATCGAGACATCATC

Downstream 100 bases:

>100_bases
TCTACCACTTATCATTTGATAGGTAGTAAAAAGGCAGTATTTATTACTGCCTTTTTTGTGCTTACTCACTTTAGAGCACG
TTATAAATTCAAAACAACCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MSKLTSDTQANLDLFIAETKETQLVWSLYNDEGWISVESTEFENAEVMPFWSNKEDAAFHNVEEWADFEVTEIPLDIFAE
DWLVTLSEDGVLVGTNWNQQLEGKEIEATELAKLYL

Sequences:

>Translated_116_residues
MSKLTSDTQANLDLFIAETKETQLVWSLYNDEGWISVESTEFENAEVMPFWSNKEDAAFHNVEEWADFEVTEIPLDIFAE
DWLVTLSEDGVLVGTNWNQQLEGKEIEATELAKLYL
>Mature_115_residues
SKLTSDTQANLDLFIAETKETQLVWSLYNDEGWISVESTEFENAEVMPFWSNKEDAAFHNVEEWADFEVTEIPLDIFAED
WLVTLSEDGVLVGTNWNQQLEGKEIEATELAKLYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13353; Mature: 13222

Theoretical pI: Translated: 3.56; Mature: 3.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLTSDTQANLDLFIAETKETQLVWSLYNDEGWISVESTEFENAEVMPFWSNKEDAAFH
CCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCEEEEECCCCCCCEEEEEECCCCCCCCC
NVEEWADFEVTEIPLDIFAEDWLVTLSEDGVLVGTNWNQQLEGKEIEATELAKLYL
CHHHHCCCEEEECCCEEECCCEEEEECCCCEEEECCCCCCCCCCEECHHHHEEECC
>Mature Secondary Structure 
SKLTSDTQANLDLFIAETKETQLVWSLYNDEGWISVESTEFENAEVMPFWSNKEDAAFH
CCCCCCCCCCEEEEEEECCCCEEEEEEECCCCEEEEECCCCCCCEEEEEECCCCCCCCC
NVEEWADFEVTEIPLDIFAEDWLVTLSEDGVLVGTNWNQQLEGKEIEATELAKLYL
CHHHHCCCEEEECCCEEECCCEEEEECCCCEEEECCCCCCCCCCEECHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA